RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 INPP5EQ9NRR6 644 aa13.23□□□□□ -0.29
LSM5-207ENST00000410044 DDX28Q9NUL7 540 aaKnown RBP13.23□□□□□ -0.29
LSM5-207ENST00000410044 NPAP1Q9NZP6 1156 aa13.23□□□□□ -0.29
LSM5-207ENST00000410044 TPRKBQ9Y3C4 175 aa13.23□□□□□ -0.29
LSM5-207ENST00000410044 IQCMA0A1B0GVH7 501 aa13.22□□□□□ -0.29
LSM5-207ENST00000410044 ZNF670-ZNF695F2Z2N8 137 aa13.22□□□□□ -0.29
LSM5-207ENST00000410044 PTAFRP25105 342 aa13.22□□□□□ -0.29
LSM5-207ENST00000410044 ACTC1P68032 377 aa13.22□□□□□ -0.29
LSM5-207ENST00000410044 ACTA1P68133 377 aa13.22□□□□□ -0.29
LSM5-207ENST00000410044 ROM1Q03395 351 aa13.22□□□□□ -0.29
LSM5-207ENST00000410044 SNTB1Q13884 538 aaKnown RBP13.22□□□□□ -0.29
LSM5-207ENST00000410044 RAB39AQ14964 217 aa13.22□□□□□ -0.29
LSM5-207ENST00000410044 RSPO1Q2MKA7 263 aaPredicted RBP13.22□□□□□ -0.29
LSM5-207ENST00000410044 ZNF684Q5T5D7 378 aa13.22□□□□□ -0.29
LSM5-207ENST00000410044 SP5Q6BEB4 398 aaPredicted RBP13.22□□□□□ -0.29
LSM5-207ENST00000410044 ZNF774Q6NX45 483 aa13.22□□□□□ -0.29
LSM5-207ENST00000410044 OR1F12Q8NHA8 337 aa13.22□□□□□ -0.29
LSM5-207ENST00000410044 AKR7LQ8NHP1 331 aa13.22□□□□□ -0.29
LSM5-207ENST00000410044 SMAP2Q8WU79 429 aaPredicted RBP13.22□□□□□ -0.29
LSM5-207ENST00000410044 THEM6Q8WUY1 208 aa13.22□□□□□ -0.29
LSM5-207ENST00000410044 IPCEF1Q8WWN9 437 aaPredicted RBP13.22□□□□□ -0.29
LSM5-207ENST00000410044 SLAMF6Q96DU3 332 aa13.22□□□□□ -0.29
LSM5-207ENST00000410044 POM121L2Q96KW2 1035 aa13.22□□□□□ -0.29
LSM5-207ENST00000410044 AMELYQ99218 206 aa13.22□□□□□ -0.29
LSM5-207ENST00000410044 PLEK2Q9NYT0 353 aa13.22□□□□□ -0.29
LSM5-207ENST00000410044 CRIM1Q9NZV1 1036 aa13.22□□□□□ -0.29
LSM5-207ENST00000410044 LAMP5Q9UJQ1 280 aa13.22□□□□□ -0.29
LSM5-207ENST00000410044 DIMT1Q9UNQ2 313 aaKnown RBP13.22□□□□□ -0.29
LSM5-207ENST00000410044 COPS3Q9UNS2 423 aa13.22□□□□□ -0.29
LSM5-207ENST00000410044 MYRFQ9Y2G1 1151 aa13.22□□□□□ -0.29
LSM5-207ENST00000410044 KLHDC2Q9Y2U9 406 aa13.22□□□□□ -0.29
LSM5-207ENST00000410044 IGHV1-18A0A0C4DH31 117 aa13.21□□□□□ -0.29
LSM5-207ENST00000410044 CASKO14936 926 aa13.21□□□□□ -0.29
LSM5-207ENST00000410044 DOK2O60496 412 aa13.21□□□□□ -0.29
LSM5-207ENST00000410044 FAM20BO75063 409 aa13.21□□□□□ -0.29
LSM5-207ENST00000410044 ZNF254O75437 659 aa13.21□□□□□ -0.29
LSM5-207ENST00000410044 APOL3O95236 402 aa13.21□□□□□ -0.29
LSM5-207ENST00000410044 GOSR1O95249 250 aa13.21□□□□□ -0.29
LSM5-207ENST00000410044 OTX1P32242 354 aaPredicted RBP13.21□□□□□ -0.29
LSM5-207ENST00000410044 SLC35A2P78381 396 aa13.21□□□□□ -0.29
LSM5-207ENST00000410044 ZNF85Q03923 595 aa13.21□□□□□ -0.29
LSM5-207ENST00000410044 EGR3Q06889 387 aa13.21□□□□□ -0.29
LSM5-207ENST00000410044 ST3GAL4Q11206 333 aa13.21□□□□□ -0.29
LSM5-207ENST00000410044 NCMAPQ5T1S8 102 aa13.21□□□□□ -0.29
LSM5-207ENST00000410044 RNLSQ5VYX0 342 aa13.21□□□□□ -0.29
LSM5-207ENST00000410044 KCTD18Q6PI47 426 aaPredicted RBP13.21□□□□□ -0.29
LSM5-207ENST00000410044 MEX3BQ6ZN04 569 aaKnown RBP13.21□□□□□ -0.29
LSM5-207ENST00000410044 WFDC8Q8IUA0 241 aa13.21□□□□□ -0.29
LSM5-207ENST00000410044 ZNF540Q8NDQ6 660 aa13.21□□□□□ -0.29
LSM5-207ENST00000410044 OR1J2Q8NGS2 313 aa13.21□□□□□ -0.29
LSM5-207ENST00000410044 ZC3HAV1LQ96H79 300 aaKnown RBP13.21□□□□□ -0.29
LSM5-207ENST00000410044 TMEM80Q96HE8 168 aa13.21□□□□□ -0.29
LSM5-207ENST00000410044 OR8B4Q96RC9 309 aa13.21□□□□□ -0.29
LSM5-207ENST00000410044 SIGLEC11Q96RL6 698 aa13.21□□□□□ -0.29
LSM5-207ENST00000410044 ATF6BQ99941 703 aa13.21□□□□□ -0.29
LSM5-207ENST00000410044 C1QTNF6Q9BXI9 259 aa13.21□□□□□ -0.29
LSM5-207ENST00000410044 KCNN3Q9UGI6 736 aa13.21□□□□□ -0.29
LSM5-207ENST00000410044 LRCH1Q9Y2L9 728 aa13.21□□□□□ -0.29
LSM5-207ENST00000410044 LOC100509620A0A075B734 347 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 A0A1W2PQL4 384 aaPredicted RBP13.2□□□□□ -0.3
LSM5-207ENST00000410044 DPRXA6NFQ7 191 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 TRIM64A6NGJ6 449 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 ZNF878C9JN71 531 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 ICMTO60725 284 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 CELA3BP08861 270 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 CECR9P0C854 216 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 ZNF35P13682 527 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 CD40P25942 277 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 STOMP27105 288 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 APEX1P27695 318 aaKnown RBP13.2□□□□□ -0.3
LSM5-207ENST00000410044 DCTDP32321 178 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 OPRL1P41146 370 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 ZNF83P51522 516 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 IDH3GP51553 393 aaPredicted RBP13.2□□□□□ -0.3
LSM5-207ENST00000410044 GALEQ14376 348 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 BEX5Q5H9J7 111 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 ZNF322Q6U7Q0 402 aaPredicted RBP13.2□□□□□ -0.3
LSM5-207ENST00000410044 TMEM108Q6UXF1 575 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 KCTD20Q7Z5Y7 419 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 ZNF679Q8IYX0 411 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 ZNF786Q8N393 782 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 OR10H4Q8NGA5 316 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 MYDGFQ969H8 173 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 MS4A3Q96HJ5 214 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 DCLRE1CQ96SD1 692 aaKnown RBP13.2□□□□□ -0.3
LSM5-207ENST00000410044 MYCBPQ99417 103 aaPredicted RBP13.2□□□□□ -0.3
LSM5-207ENST00000410044 KCNJ15Q99712 375 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 RHNO1Q9BSD3 238 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 NIPAL2Q9H841 368 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 ERVK13-1Q9NX77 482 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 BLOC1S6Q9UL45 172 aa13.2□□□□□ -0.3
LSM5-207ENST00000410044 DAPL1A0PJW8 107 aa13.19□□□□□ -0.3
LSM5-207ENST00000410044 FAM221AA4D161 298 aa13.19□□□□□ -0.3
LSM5-207ENST00000410044 DEFB108AA8MXU0 73 aa13.19□□□□□ -0.3
LSM5-207ENST00000410044 PRR32B1ATL7 298 aa13.19□□□□□ -0.3
LSM5-207ENST00000410044 M0R1B8 84 aa13.19□□□□□ -0.3
LSM5-207ENST00000410044 MRPS14O60783 128 aaKnown RBP13.19□□□□□ -0.3
LSM5-207ENST00000410044 SULT1C4O75897 302 aa13.19□□□□□ -0.3
LSM5-207ENST00000410044 CDK1P06493 297 aa13.19□□□□□ -0.3
LSM5-207ENST00000410044 ADRA2AP08913 450 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms