RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 KIR2DL5AQ8N109 375 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 CADM2Q8N3J6 435 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 OR8J2Q8NGG1 315 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 OR51S1Q8NGJ8 323 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 OR8U1Q8NH10 309 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 KIR2DL5BQ8NHK3 375 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 APH1BQ8WW43 257 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 ING5Q8WYH8 240 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 ARPC1AQ92747 370 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 CCDC127Q96BQ5 260 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 DYNLL2Q96FJ2 89 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 B3GALT6Q96L58 329 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 ZNF681Q96N22 645 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 SH3GL3Q99963 347 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 SHCBP1LQ9BZQ2 653 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 PORCNQ9H237 461 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 WDR55Q9H6Y2 383 aaPredicted RBP3.81□□□□□ -1.8
LSM5-205ENST00000409952 KCNJ16Q9NPI9 418 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 SDHAF2Q9NX18 166 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 SHPKQ9UHJ6 478 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 CYB5R1Q9UHQ9 305 aa3.81□□□□□ -1.8
LSM5-205ENST00000409952 GOLGA6L10A6NI86 522 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 NCBP2LA6PVI3 153 aaKnown RBP3.8□□□□□ -1.8
LSM5-205ENST00000409952 ANKRD63C9JTQ0 380 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 DFFAO00273 331 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 AGPAT2O15120 278 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 AQP9O43315 295 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 KBTBD11O94819 623 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 RCBTB2O95199 551 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 AIFM1O95831 613 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 IGLV2-11P01706 119 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 SLC35E2P0CK97 266 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 HOXA9P31269 272 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 CEACAM3P40198 252 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 VDAC2P45880 294 aaPredicted RBP3.8□□□□□ -1.8
LSM5-205ENST00000409952 RAB7AP51149 207 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 FABP6P51161 128 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 HCCSP53701 268 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 DLX1P56177 255 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 PITPNAQ00169 270 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 CD47Q08722 323 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 IFFO1Q0D2I5 559 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 FCHO2Q0JRZ9 810 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 ST3GAL4Q11206 333 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 DYNC1I2Q13409 638 aaKnown RBP3.8□□□□□ -1.8
LSM5-205ENST00000409952 GNA13Q14344 377 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 TGIF1Q15583 401 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 KYAT1Q16773 422 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 OR2B11Q5JQS5 317 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 C1orf100Q5SVJ3 147 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 C1orf146Q5VVC0 180 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 FRMPD2BQ6IN97 320 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 C12orf54Q6X4T0 127 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 ZADH2Q8N4Q0 377 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 CSNK1G2-AS1Q8NCQ2 148 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 OR5AR1Q8NGP9 310 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 ZNF461Q8TAF7 563 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 SDR42E1Q8WUS8 393 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 ITLN1Q8WWA0 313 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 RORBQ92753 470 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 RCN3Q96D15 328 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 OR5M11Q96RB7 305 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 NODALQ96S42 347 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 P2RX4Q99571 388 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 TSNAXQ99598 290 aaKnown RBP3.8□□□□□ -1.8
LSM5-205ENST00000409952 FGFBP2Q9BYJ0 223 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 C6orf50Q9HD87 102 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 C1orf109Q9NX04 203 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 SLC25A37Q9NYZ2 338 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 XCL2Q9UBD3 114 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 KLHL21Q9UJP4 597 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 VSIG4Q9Y279 399 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 UGT2A1Q9Y4X1 527 aa3.8□□□□□ -1.8
LSM5-205ENST00000409952 FHOD3Q2V2M9 1422 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 MAPK8IP3Q9UPT6 1336 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 IGKV1D-13A0A0B4J2D9 117 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 ANKRD65E5RJM6 399 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 GABRPO00591 440 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 TBL1XO60907 577 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 SRP72O76094 671 aaKnown RBP3.79□□□□□ -1.8
LSM5-205ENST00000409952 DUSP14O95147 198 aaKnown RBP3.79□□□□□ -1.8
LSM5-205ENST00000409952 HPNP05981 417 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 KRT7P08729 469 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 IGKV1-13P0DP09 117 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 HLA-GP17693 338 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 LOXP28300 417 aaPredicted RBP3.79□□□□□ -1.8
LSM5-205ENST00000409952 ZNF121P58317 390 aaPredicted RBP3.79□□□□□ -1.8
LSM5-205ENST00000409952 OR2B8PP59922 312 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 PRPS1P60891 318 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 DSTNP60981 165 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 NUTF2P61970 127 aaKnown RBP3.79□□□□□ -1.8
LSM5-205ENST00000409952 TGFBR3Q03167 851 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 MXD1Q05195 221 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 CD300CQ08708 224 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 GPNMBQ14956 572 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 BCL2A1Q16548 175 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 TMEM30BQ3MIR4 351 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 RBM48Q5RL73 367 aaKnown RBP3.79□□□□□ -1.8
LSM5-205ENST00000409952 NPSR1Q6W5P4 371 aa3.79□□□□□ -1.8
LSM5-205ENST00000409952 ZNF620Q6ZNG0 422 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms