RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 SPICQ8N5J4 248 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.48□□□□□ -0.41
CBX3-203ENST00000409747 NANPQ8TBE9 248 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 RASD2Q96D21 266 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 DCLRE1CQ96SD1 692 aaKnown RBP12.48□□□□□ -0.41
CBX3-203ENST00000409747 TMPRSS13Q9BYE2 586 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 RERGLQ9H628 205 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 UBAP1Q9NZ09 502 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 ASH2LQ9UBL3 628 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 POLR1DQ9Y2S0 133 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 NPTNQ9Y639 398 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 PTP4A3O75365 173 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 FOXH1O75593 365 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 PRDX6P30041 224 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 OMPP47874 163 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 GLYATQ6IB77 296 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 C12orf54Q6X4T0 127 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 OR2Z1Q8NG97 314 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 SAMD8Q96LT4 415 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 TMEM106BQ9NUM4 274 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 DCAF13Q9NV06 445 aaKnown RBP12.48□□□□□ -0.41
CBX3-203ENST00000409747 IL19Q9UHD0 177 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 EGFL7Q9UHF1 273 aa12.48□□□□□ -0.41
CBX3-203ENST00000409747 PPIAL4EA0A075B759 164 aa12.47□□□□□ -0.41
CBX3-203ENST00000409747 PPIAL4CA0A0B4J2A2 164 aa12.47□□□□□ -0.41
CBX3-203ENST00000409747 OR6C6A6NF89 314 aa12.47□□□□□ -0.41
CBX3-203ENST00000409747 UNC119BA6NIH7 251 aa12.47□□□□□ -0.41
CBX3-203ENST00000409747 PPIAL4DF5H284 164 aa12.47□□□□□ -0.41
CBX3-203ENST00000409747 TRIM77I1YAP6 450 aa12.47□□□□□ -0.41
CBX3-203ENST00000409747 SOCS2O14508 198 aa12.47□□□□□ -0.41
CBX3-203ENST00000409747 TXNDC12O95881 172 aa12.47□□□□□ -0.41
CBX3-203ENST00000409747 PPIAL4FP0DN26 164 aa12.47□□□□□ -0.41
CBX3-203ENST00000409747 CRABP1P29762 137 aa12.47□□□□□ -0.41
CBX3-203ENST00000409747 SMIM11AP58511 58 aa12.47□□□□□ -0.41
CBX3-203ENST00000409747 HILS1P60008 231 aa12.47□□□□□ -0.41
CBX3-203ENST00000409747 ACTG1P63261 375 aa12.47□□□□□ -0.41
CBX3-203ENST00000409747 SMARCD3Q6STE5 483 aa12.47□□□□□ -0.41
CBX3-203ENST00000409747 C1orf229Q6ZS94 237 aaPredicted RBP12.47□□□□□ -0.41
CBX3-203ENST00000409747 TSEN54Q7Z6J9 526 aaKnown RBP12.47□□□□□ -0.41
CBX3-203ENST00000409747 KLHL36Q8N4N3 616 aa12.47□□□□□ -0.41
CBX3-203ENST00000409747 OR5L1Q8NGL2 311 aa12.47□□□□□ -0.41
CBX3-203ENST00000409747 OR1F12Q8NHA8 337 aa12.47□□□□□ -0.41
CBX3-203ENST00000409747 PTP4A1Q93096 173 aa12.47□□□□□ -0.41
CBX3-203ENST00000409747 CMBLQ96DG6 245 aa12.47□□□□□ -0.41
CBX3-203ENST00000409747 SUCNR1Q9BXA5 334 aa12.47□□□□□ -0.41
CBX3-203ENST00000409747 ADA2Q9NZK5 511 aa12.47□□□□□ -0.41
CBX3-203ENST00000409747 COA3Q9Y2R0 106 aaPredicted RBP12.47□□□□□ -0.41
CBX3-203ENST00000409747 IER3IP1Q9Y5U9 82 aa12.47□□□□□ -0.41
CBX3-203ENST00000409747 TRBV4-1A0A0J9YWV2 114 aa12.46□□□□□ -0.41
CBX3-203ENST00000409747 IGHV2-70P01814 119 aa12.46□□□□□ -0.41
CBX3-203ENST00000409747 RAC2P15153 192 aa12.46□□□□□ -0.41
CBX3-203ENST00000409747 KCNMB1Q16558 191 aa12.46□□□□□ -0.41
CBX3-203ENST00000409747 TMEM155Q4W5P6 130 aa12.46□□□□□ -0.41
CBX3-203ENST00000409747 ZNF283Q8N7M2 679 aa12.46□□□□□ -0.41
CBX3-203ENST00000409747 FANK1Q8TC84 345 aa12.46□□□□□ -0.41
CBX3-203ENST00000409747 HAVCR1Q96D42 359 aa12.46□□□□□ -0.41
CBX3-203ENST00000409747 C7orf34Q96L11 122 aa12.46□□□□□ -0.41
CBX3-203ENST00000409747 DHRS1Q96LJ7 313 aa12.46□□□□□ -0.41
CBX3-203ENST00000409747 RBM4Q9BWF3 364 aaKnown RBP12.46□□□□□ -0.41
CBX3-203ENST00000409747 HDHD2Q9H0R4 259 aa12.46□□□□□ -0.41
CBX3-203ENST00000409747 MYLK2Q9H1R3 596 aa12.46□□□□□ -0.41
CBX3-203ENST00000409747 C7orf69Q9H7B7 122 aa12.46□□□□□ -0.41
CBX3-203ENST00000409747 IFNL4K9M1U5 179 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 AVPP01185 164 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 LCN2P80188 198 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 SLC27A4Q6P1M0 643 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 C1orf94Q6P1W5 598 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 BPIFB2Q8N4F0 458 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 GJC3Q8NFK1 279 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 FAM216AQ8WUB2 273 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 ELAC2Q9BQ52 826 aaKnown RBP12.45□□□□□ -0.42
CBX3-203ENST00000409747 NUAK2Q9H093 628 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 NSRP1Q9H0G5 558 aaKnown RBP12.45□□□□□ -0.42
CBX3-203ENST00000409747 POFUT1Q9H488 388 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 GORASP2Q9H8Y8 452 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 IL20RAQ9UHF4 553 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 MAGEL2Q9UJ55 1249 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 PPP1R3CQ9UQK1 317 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 STARD10Q9Y365 291 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 IMPA2O14732 288 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 SBK2P0C263 348 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 SLC6A6P31641 620 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 CENPAP49450 140 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 BTG1P62324 171 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 CCDC92Q53HC0 331 aaPredicted RBP12.45□□□□□ -0.42
CBX3-203ENST00000409747 Q6ZR03 302 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 PTCHD4Q6ZW05 846 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 ZNF771Q7L3S4 317 aaPredicted RBP12.45□□□□□ -0.42
CBX3-203ENST00000409747 JAZF1Q86VZ6 243 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 OR52J3Q8NH60 311 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 APOBEC3DQ96AK3 386 aaPredicted RBP12.45□□□□□ -0.42
CBX3-203ENST00000409747 MCUR1Q96AQ8 359 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 COQ7Q99807 217 aa12.45□□□□□ -0.42
CBX3-203ENST00000409747 RER1O15258 196 aa12.44□□□□□ -0.42
CBX3-203ENST00000409747 RGS9O75916 674 aaPredicted RBP12.44□□□□□ -0.42
CBX3-203ENST00000409747 DYSFO75923 2080 aa12.44□□□□□ -0.42
CBX3-203ENST00000409747 DIRAS1O95057 198 aa12.44□□□□□ -0.42
CBX3-203ENST00000409747 GADD45GO95257 159 aa12.44□□□□□ -0.42
CBX3-203ENST00000409747 RENP00797 406 aa12.44□□□□□ -0.42
CBX3-203ENST00000409747 ADRA2CP18825 462 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms