RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 WNT9BO14905 357 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 RENP00797 406 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 GSTM3P21266 225 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 ATP6V1B2P21281 511 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 DVL1P1P54792 670 aaPredicted RBP16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 CCDC92Q53HC0 331 aaPredicted RBP16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 ZMAT1Q5H9K5 638 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 PGBD2Q6P3X8 592 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 LEG1Q6P5S2 330 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 IL17RELQ6ZVW7 336 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 JAZF1Q86VZ6 243 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 OR6V1Q8N148 313 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 LINC00471Q8N535 108 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 CCDC197Q8NCU1 140 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 OR1F12Q8NHA8 337 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 ELMOD3Q96FG2 381 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 COG8Q96MW5 612 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 DIRC2Q96SL1 478 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 NMNAT3Q96T66 252 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 MUC13Q9H3R2 512 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 NARFLQ9H6Q4 476 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 ATPIF1Q9UII2 106 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 ZDHHC8Q9ULC8 765 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 B9D1Q9UPM9 204 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 GRIP1Q9Y3R0 1128 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 GAAP10253 952 aa16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 HIST1H1CP16403 213 aaKnown RBP16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 CALB2P22676 271 aa16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 MAGEA2P43356 314 aa16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 CENPAP49450 140 aa16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 LMO4P61968 165 aa16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 HIST1H3AP68431 136 aa16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 PSG7Q13046 419 aa16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 HFEQ30201 348 aa16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 HIST2H3PS2Q5TEC6 136 aa16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 ZNF620Q6ZNG0 422 aa16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 HIST2H3AQ71DI3 136 aa16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 GJC3Q8NFK1 279 aa16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 OR4K13Q8NH42 304 aa16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 SPATA3Q8NHX4 192 aa16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 DCLRE1CQ96SD1 692 aaKnown RBP16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 TRIM15Q9C019 465 aa16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 EGLN1Q9GZT9 426 aa16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 MAGIXQ9H6Y5 334 aa16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 SRA1Q9HD15 236 aaKnown RBP16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 TREM2Q9NZC2 230 aa16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 TMEFF2Q9UIK5 374 aaPredicted RBP16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 POLR1DQ9Y2S0 133 aa16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 STARD10Q9Y365 291 aa16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 LYVE1Q9Y5Y7 322 aa16.67■□□□□ 0.26
TSPAN4-209ENST00000409543 TCRBV5S2A0A599 114 aa16.66■□□□□ 0.26
TSPAN4-209ENST00000409543 TNFRSF11BO00300 401 aa16.66■□□□□ 0.26
TSPAN4-209ENST00000409543 DYNC1I1O14576 645 aa16.66■□□□□ 0.26
TSPAN4-209ENST00000409543 RER1O15258 196 aa16.66■□□□□ 0.26
TSPAN4-209ENST00000409543 TIMM8AO60220 97 aaPredicted RBP16.66■□□□□ 0.26
TSPAN4-209ENST00000409543 GPANK1O95872 356 aa16.66■□□□□ 0.26
TSPAN4-209ENST00000409543 CD55P08174 381 aa16.66■□□□□ 0.26
TSPAN4-209ENST00000409543 PCMT1P22061 227 aa16.66■□□□□ 0.26
TSPAN4-209ENST00000409543 NOS3P29474 1203 aa16.66■□□□□ 0.26
TSPAN4-209ENST00000409543 TRIM25Q14258 630 aaKnown RBP16.66■□□□□ 0.26
TSPAN4-209ENST00000409543 LCN8Q6JVE9 175 aa16.66■□□□□ 0.26
TSPAN4-209ENST00000409543 ZBTB46Q86UZ6 589 aa16.66■□□□□ 0.26
TSPAN4-209ENST00000409543 SLC7A6Q92536 515 aa16.66■□□□□ 0.26
TSPAN4-209ENST00000409543 POFUT1Q9H488 388 aa16.66■□□□□ 0.26
TSPAN4-209ENST00000409543 LHFPL6Q9Y693 200 aa16.66■□□□□ 0.26
TSPAN4-209ENST00000409543 CACNG2Q9Y698 323 aa16.66■□□□□ 0.26
TSPAN4-209ENST00000409543 RNF212BA8MTL3 300 aa16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 FAM157AC9JC47 383 aa16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 CLDN25C9JDP6 229 aa16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 J3QW42 95 aa16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 PHF1O43189 567 aaPredicted RBP16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 T-ENOLP0DO92 83 aa16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 KITLGP21583 273 aa16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 RGS6P49758 472 aa16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 MVKQ03426 396 aa16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 CDK5R2Q13319 367 aa16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 MEP1BQ16820 701 aa16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 RPL13AP3Q6NVV1 102 aa16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 RINLQ6ZS11 566 aa16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 GLCCI1Q86VQ1 547 aa16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 DHFR2Q86XF0 187 aa16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 SLC26A10Q8NG04 563 aa16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 OR4C15Q8NGM1 316 aa16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 PTP4A1Q93096 173 aa16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 POP5Q969H6 163 aaKnown RBP16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 HAVCR1Q96D42 359 aa16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 CMBLQ96DG6 245 aa16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 COQ7Q99807 217 aa16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 HDHD2Q9H0R4 259 aa16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 MSL2Q9HCI7 577 aa16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 RPRD1BQ9NQG5 326 aaKnown RBP16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 PURGQ9UJV8 347 aaKnown RBP16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 CDH10Q9Y6N8 788 aa16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 CUBNO60494 3623 aa16.65■□□□□ 0.26
TSPAN4-209ENST00000409543 OR6C68A6NDL8 312 aa16.64■□□□□ 0.25
TSPAN4-209ENST00000409543 UBOX5O94941 541 aa16.64■□□□□ 0.25
TSPAN4-209ENST00000409543 MSMBP08118 114 aa16.64■□□□□ 0.25
TSPAN4-209ENST00000409543 DBHP09172 617 aa16.64■□□□□ 0.25
TSPAN4-209ENST00000409543 MS4A2Q01362 244 aa16.64■□□□□ 0.25
TSPAN4-209ENST00000409543 COX10Q12887 443 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms