RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 FGF20Q9NP95 211 aaPredicted RBP14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 B3GNT2Q9NY97 397 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 GDF2Q9UK05 429 aaPredicted RBP14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 PCDHGB5Q9Y5G0 923 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 SLC25A15Q9Y619 301 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 HEATR1Q9H583 2144 aaKnown RBP14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 A6NNC1 897 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 SGCEO43556 437 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 APOL3O95236 402 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 MMP7P09237 267 aaPredicted RBP14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 RPS27P42677 84 aaKnown RBP14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 HIST1H3AP68431 136 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 PIGFQ07326 219 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 ST3GAL4Q11206 333 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 RAB35Q15286 201 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 TAB1Q15750 504 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 HIST2H3PS2Q5TEC6 136 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 OTPQ5XKR4 325 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 CORO6Q6QEF8 472 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 AHSA2Q719I0 299 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 HIST2H3AQ71DI3 136 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 MDP1Q86V88 176 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 TMEM200AQ86VY9 491 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 OR52I1Q8NGK6 324 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 THEM6Q8WUY1 208 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 TMEM80Q96HE8 168 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 WFIKKN1Q96NZ8 548 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 COPS4Q9BT78 406 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 OR2H1Q9GZK4 316 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 HDHD2Q9H0R4 259 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 NGBQ9NPG2 151 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 CHCHD3Q9NX63 227 aaKnown RBP14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 PLEK2Q9NYT0 353 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 ATPIF1Q9UII2 106 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 DIMT1Q9UNQ2 313 aaKnown RBP14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 MYRFQ9Y2G1 1151 aa14.39□□□□□ -0.11
TSPAN4-208ENST00000409531 TACC2O95359 2948 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 LRBAP50851 2863 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 IQCMA0A1B0GVH7 501 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 A0A1W2PR80 420 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 DAPL1A0PJW8 107 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 PTGES3LE9PB15 166 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 J3QRE1 110 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 RER1O15258 196 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 DOK2O60496 412 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 GOSR1O95249 250 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 IGHA1P01876 353 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 PATE4P0C8F1 98 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 CBR1P16152 277 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 MYL12AP19105 171 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 ALOX5APP20292 161 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 EEF1B2P24534 225 aaKnown RBP14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 CHN2P52757 468 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 GABARAPL2P60520 117 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 TUBA1BP68363 451 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 TUBA4AP68366 448 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 SLC35A2P78381 396 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 PSG4Q00888 419 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 ECH1Q13011 328 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 C3orf36Q3SXR2 165 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 PABPC1L2AQ5JQF8 200 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 TUBA1AQ71U36 451 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 FGFBP3Q8TAT2 258 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 ST7LQ8TDW4 575 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 ABHD6Q9BV23 337 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 JAM3Q9BX67 310 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 DUSP21Q9H596 190 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 FKBP14Q9NWM8 211 aa14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 EXOSC1Q9Y3B2 195 aaKnown RBP14.38□□□□□ -0.11
TSPAN4-208ENST00000409531 SPG11Q96JI7 2443 aa14.37□□□□□ -0.11
TSPAN4-208ENST00000409531 PRR14LQ5THK1 2151 aa14.37□□□□□ -0.11
TSPAN4-208ENST00000409531 ABCA4P78363 2273 aa14.37□□□□□ -0.11
TSPAN4-208ENST00000409531 A0A1W2PQL4 384 aaPredicted RBP14.37□□□□□ -0.11
TSPAN4-208ENST00000409531 ZNF503-AS2A6NEH8 195 aa14.37□□□□□ -0.11
TSPAN4-208ENST00000409531 ZNF878C9JN71 531 aa14.37□□□□□ -0.11
TSPAN4-208ENST00000409531 TNFAIP8O95379 198 aa14.37□□□□□ -0.11
TSPAN4-208ENST00000409531 IGKV3-15P01624 115 aa14.37□□□□□ -0.11
TSPAN4-208ENST00000409531 COX5BP10606 129 aa14.37□□□□□ -0.11
TSPAN4-208ENST00000409531 PSKH1P11801 424 aa14.37□□□□□ -0.11
TSPAN4-208ENST00000409531 HCCSP53701 268 aa14.37□□□□□ -0.11
TSPAN4-208ENST00000409531 EGR3Q06889 387 aa14.37□□□□□ -0.11
TSPAN4-208ENST00000409531 ELFN2Q5R3F8 820 aa14.37□□□□□ -0.11
TSPAN4-208ENST00000409531 TMEM154Q6P9G4 183 aa14.37□□□□□ -0.11
TSPAN4-208ENST00000409531 CFAP77Q6ZQR2 320 aa14.37□□□□□ -0.11
TSPAN4-208ENST00000409531 SMAP2Q8WU79 429 aaPredicted RBP14.37□□□□□ -0.11
TSPAN4-208ENST00000409531 SLAMF6Q96DU3 332 aa14.37□□□□□ -0.11
TSPAN4-208ENST00000409531 MAP6Q96JE9 813 aa14.37□□□□□ -0.11
TSPAN4-208ENST00000409531 NR1H4Q96RI1 486 aaPredicted RBP14.37□□□□□ -0.11
TSPAN4-208ENST00000409531 TBX5Q99593 518 aa14.37□□□□□ -0.11
TSPAN4-208ENST00000409531 ATF6BQ99941 703 aa14.37□□□□□ -0.11
TSPAN4-208ENST00000409531 WNT5BQ9H1J7 359 aa14.37□□□□□ -0.11
TSPAN4-208ENST00000409531 RGS10O43665 173 aa14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 MRPS14O60783 128 aaKnown RBP14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 SERPINA5P05154 406 aa14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 CDK1P06493 297 aa14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 ACTA2P62736 377 aa14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 GRB2P62993 217 aaKnown RBP14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 ACTG2P63267 376 aa14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 GALEQ14376 348 aa14.36□□□□□ -0.11
TSPAN4-208ENST00000409531 TAF13Q15543 124 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms