RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 MLC1Q15049 377 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 PHLDA2Q53GA4 152 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 SEZ6L2Q6UXD5 910 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 DCXRQ7Z4W1 244 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 LINC00346Q8IVM7 164 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 MKXQ8IYA7 352 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 RXFP4Q8TDU9 374 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 UHRF2Q96PU4 802 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 SLC35B3Q9H1N7 401 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 CCL27Q9Y4X3 112 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 IQCJQ1A5X6 159 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 SHEQ5VZ18 495 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 SUMF1Q8NBK3 374 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 OR5B2Q96R09 309 aa16.11■□□□□ 0.17
SMPD4-202ENST00000409031 A0A087X0M5 115 aa16.1■□□□□ 0.17
SMPD4-202ENST00000409031 A0A1B0GX30 115 aa16.1■□□□□ 0.17
SMPD4-202ENST00000409031 TBX19O60806 448 aa16.1■□□□□ 0.17
SMPD4-202ENST00000409031 C1orf61Q13536 156 aa16.1■□□□□ 0.17
SMPD4-202ENST00000409031 MIDNQ504T8 468 aa16.1■□□□□ 0.17
SMPD4-202ENST00000409031 FAM199XQ6PEV8 388 aaPredicted RBP16.1■□□□□ 0.17
SMPD4-202ENST00000409031 CPEB2Q7Z5Q1 589 aaKnown RBP16.1■□□□□ 0.17
SMPD4-202ENST00000409031 ZNF75AQ96N20 296 aa16.1■□□□□ 0.17
SMPD4-202ENST00000409031 URB1O60287 2271 aaKnown RBP16.1■□□□□ 0.17
SMPD4-202ENST00000409031 GSTP1P09211 210 aaKnown RBP16.1■□□□□ 0.17
SMPD4-202ENST00000409031 TRMT12Q53H54 448 aaKnown RBP16.1■□□□□ 0.17
SMPD4-202ENST00000409031 WFDC5Q8TCV5 224 aa16.1■□□□□ 0.17
SMPD4-202ENST00000409031 DIO2Q92813 273 aa16.1■□□□□ 0.17
SMPD4-202ENST00000409031 UBL7Q96S82 380 aaPredicted RBP16.1■□□□□ 0.17
SMPD4-202ENST00000409031 ABHD6Q9BV23 337 aa16.1■□□□□ 0.17
SMPD4-202ENST00000409031 SUCNR1Q9BXA5 334 aa16.1■□□□□ 0.17
SMPD4-202ENST00000409031 MED16Q9Y2X0 877 aa16.1■□□□□ 0.17
SMPD4-202ENST00000409031 HOXC8P31273 242 aa16.1■□□□□ 0.17
SMPD4-202ENST00000409031 RAE1P78406 368 aaKnown RBP16.1■□□□□ 0.17
SMPD4-202ENST00000409031 INPP5JQ15735 1006 aaPredicted RBP16.1■□□□□ 0.17
SMPD4-202ENST00000409031 TMPRSS11FQ6ZWK6 438 aa16.1■□□□□ 0.17
SMPD4-202ENST00000409031 SLC39A7Q92504 469 aa16.1■□□□□ 0.17
SMPD4-202ENST00000409031 PCDHGA1Q9Y5H4 931 aa16.1■□□□□ 0.17
SMPD4-202ENST00000409031 A0A087WV62 115 aa16.1■□□□□ 0.17
SMPD4-202ENST00000409031 FAM221BA6H8Z2 402 aa16.1■□□□□ 0.17
SMPD4-202ENST00000409031 KLK3P07288 261 aaPredicted RBP16.1■□□□□ 0.17
SMPD4-202ENST00000409031 PI3P19957 117 aa16.1■□□□□ 0.17
SMPD4-202ENST00000409031 PXNP49023 591 aaPredicted RBP16.1■□□□□ 0.17
SMPD4-202ENST00000409031 GZMMP51124 257 aa16.1■□□□□ 0.17
SMPD4-202ENST00000409031 RPL27P61353 136 aaKnown RBP16.1■□□□□ 0.17
SMPD4-202ENST00000409031 AGERQ15109 404 aa16.1■□□□□ 0.17
SMPD4-202ENST00000409031 BRICD5Q6PL45 260 aa16.1■□□□□ 0.17
SMPD4-202ENST00000409031 PLPP6Q8IY26 295 aa16.1■□□□□ 0.17
SMPD4-202ENST00000409031 LPAR4Q99677 370 aa16.1■□□□□ 0.17
SMPD4-202ENST00000409031 DNAJB11Q9UBS4 358 aa16.1■□□□□ 0.17
SMPD4-202ENST00000409031 SEMG1P04279 462 aa16.09■□□□□ 0.17
SMPD4-202ENST00000409031 CST5P28325 142 aaPredicted RBP16.09■□□□□ 0.17
SMPD4-202ENST00000409031 ADAMTSL4Q6UY14 1074 aa16.09■□□□□ 0.17
SMPD4-202ENST00000409031 TMEM123Q8N131 208 aa16.09■□□□□ 0.17
SMPD4-202ENST00000409031 MITD1Q8WV92 249 aa16.09■□□□□ 0.17
SMPD4-202ENST00000409031 SLC6A18Q96N87 628 aa16.09■□□□□ 0.17
SMPD4-202ENST00000409031 CASD1Q96PB1 797 aa16.09■□□□□ 0.17
SMPD4-202ENST00000409031 BANF2Q9H503 90 aa16.09■□□□□ 0.17
SMPD4-202ENST00000409031 RYDENQ9NUL5 291 aaKnown RBP16.09■□□□□ 0.17
SMPD4-202ENST00000409031 FLVCR1Q9Y5Y0 555 aa16.09■□□□□ 0.17
SMPD4-202ENST00000409031 METTL15P1P0C7V9 234 aa16.09■□□□□ 0.17
SMPD4-202ENST00000409031 PPIAP62937 165 aaKnown RBP16.09■□□□□ 0.17
SMPD4-202ENST00000409031 KLF9Q13886 244 aaPredicted RBP16.09■□□□□ 0.17
SMPD4-202ENST00000409031 GGNBP1Q5YKI7 109 aa16.09■□□□□ 0.17
SMPD4-202ENST00000409031 SSX7Q7RTT5 188 aa16.09■□□□□ 0.17
SMPD4-202ENST00000409031 GPR119Q8TDV5 335 aa16.09■□□□□ 0.17
SMPD4-202ENST00000409031 HINT2Q9BX68 163 aa16.09■□□□□ 0.17
SMPD4-202ENST00000409031 STARD5Q9NSY2 213 aa16.09■□□□□ 0.17
SMPD4-202ENST00000409031 ARL3P36405 182 aa16.09■□□□□ 0.17
SMPD4-202ENST00000409031 NPSR1Q6W5P4 371 aa16.09■□□□□ 0.17
SMPD4-202ENST00000409031 C17orf47Q8NEP4 570 aa16.09■□□□□ 0.17
SMPD4-202ENST00000409031 STT3BQ8TCJ2 826 aa16.09■□□□□ 0.17
SMPD4-202ENST00000409031 PRO1933Q9H354 126 aa16.09■□□□□ 0.17
SMPD4-202ENST00000409031 PLK3Q9H4B4 646 aa16.09■□□□□ 0.17
SMPD4-202ENST00000409031 RASL12Q9NYN1 266 aa16.09■□□□□ 0.17
SMPD4-202ENST00000409031 SULT2B1O00204 365 aa16.08■□□□□ 0.17
SMPD4-202ENST00000409031 HLA-DOBP13765 273 aa16.08■□□□□ 0.17
SMPD4-202ENST00000409031 SDHBP21912 280 aa16.08■□□□□ 0.17
SMPD4-202ENST00000409031 IRS1P35568 1242 aa16.08■□□□□ 0.17
SMPD4-202ENST00000409031 CD81P60033 236 aa16.08■□□□□ 0.17
SMPD4-202ENST00000409031 RNF4P78317 190 aa16.08■□□□□ 0.17
SMPD4-202ENST00000409031 ZP2Q05996 745 aa16.08■□□□□ 0.17
SMPD4-202ENST00000409031 SLC17A1Q14916 467 aa16.08■□□□□ 0.17
SMPD4-202ENST00000409031 LDLRAD1Q5T700 205 aa16.08■□□□□ 0.17
SMPD4-202ENST00000409031 ZNF808Q8N4W9 903 aaPredicted RBP16.08■□□□□ 0.17
SMPD4-202ENST00000409031 RAB18Q9NP72 206 aa16.08■□□□□ 0.17
SMPD4-202ENST00000409031 TCAPO15273 167 aa16.08■□□□□ 0.17
SMPD4-202ENST00000409031 MBTPS2O43462 519 aa16.08■□□□□ 0.17
SMPD4-202ENST00000409031 ERVK-16P61578 105 aa16.08■□□□□ 0.17
SMPD4-202ENST00000409031 FAM58AQ8N1B3 248 aa16.08■□□□□ 0.17
SMPD4-202ENST00000409031 SLC22A12Q96S37 553 aa16.08■□□□□ 0.17
SMPD4-202ENST00000409031 ZNF2Q9BSG1 426 aaPredicted RBP16.08■□□□□ 0.17
SMPD4-202ENST00000409031 ARV1Q9H2C2 271 aa16.08■□□□□ 0.17
SMPD4-202ENST00000409031 ELOA3CA0A087WX78 387 aaPredicted RBP16.08■□□□□ 0.16
SMPD4-202ENST00000409031 FTCDNL1E5RQL4 147 aa16.08■□□□□ 0.16
SMPD4-202ENST00000409031 PVRP15151 417 aa16.08■□□□□ 0.16
SMPD4-202ENST00000409031 IGFBP6P24592 240 aaPredicted RBP16.08■□□□□ 0.16
SMPD4-202ENST00000409031 C10orf111Q8N326 155 aa16.08■□□□□ 0.16
SMPD4-202ENST00000409031 SLC52A3Q9NQ40 469 aa16.08■□□□□ 0.16
SMPD4-202ENST00000409031 SIGLEC7Q9Y286 467 aa16.08■□□□□ 0.16
SMPD4-202ENST00000409031 ARAP2Q8WZ64 1704 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms