RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 WIPI1Q5MNZ9 446 aaPredicted RBP21.87■■□□□ 1.09
DNMT3A-206ENST00000406659 LINGO2Q7L985 606 aa21.87■■□□□ 1.09
DNMT3A-206ENST00000406659 PRSS45Q7RTY3 260 aa21.87■■□□□ 1.09
DNMT3A-206ENST00000406659 GLCCI1Q86VQ1 547 aa21.87■■□□□ 1.09
DNMT3A-206ENST00000406659 SERPINA12Q8IW75 414 aa21.87■■□□□ 1.09
DNMT3A-206ENST00000406659 TOMM5Q8N4H5 51 aa21.87■■□□□ 1.09
DNMT3A-206ENST00000406659 IP6K3Q96PC2 410 aa21.87■■□□□ 1.09
DNMT3A-206ENST00000406659 IL17BQ9UHF5 180 aa21.87■■□□□ 1.09
DNMT3A-206ENST00000406659 CACNG2Q9Y698 323 aa21.87■■□□□ 1.09
DNMT3A-206ENST00000406659 DOCK10Q96BY6 2186 aa21.87■■□□□ 1.09
DNMT3A-206ENST00000406659 TTLL8A6PVC2 850 aa21.87■■□□□ 1.09
DNMT3A-206ENST00000406659 P2RY10O00398 339 aa21.87■■□□□ 1.09
DNMT3A-206ENST00000406659 CCNKO75909 580 aa21.87■■□□□ 1.09
DNMT3A-206ENST00000406659 ENPP1P22413 925 aa21.87■■□□□ 1.09
DNMT3A-206ENST00000406659 HSD11B1P28845 292 aa21.87■■□□□ 1.09
DNMT3A-206ENST00000406659 SGCAQ16586 387 aa21.87■■□□□ 1.09
DNMT3A-206ENST00000406659 STPG1Q5TH74 334 aa21.87■■□□□ 1.09
DNMT3A-206ENST00000406659 PNPLA2Q96AD5 504 aa21.87■■□□□ 1.09
DNMT3A-206ENST00000406659 UTP23Q9BRU9 249 aaKnown RBP21.87■■□□□ 1.09
DNMT3A-206ENST00000406659 TAS2R4Q9NYW5 299 aa21.87■■□□□ 1.09
DNMT3A-206ENST00000406659 TTC28Q96AY4 2481 aa21.86■■□□□ 1.09
DNMT3A-206ENST00000406659 KNTC1P50748 2209 aa21.86■■□□□ 1.09
DNMT3A-206ENST00000406659 PINLYPA6NC86 204 aa21.86■■□□□ 1.09
DNMT3A-206ENST00000406659 CENPXA8MT69 81 aa21.86■■□□□ 1.09
DNMT3A-206ENST00000406659 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.86■■□□□ 1.09
DNMT3A-206ENST00000406659 FSTP19883 344 aa21.86■■□□□ 1.09
DNMT3A-206ENST00000406659 RAB11BQ15907 218 aa21.86■■□□□ 1.09
DNMT3A-206ENST00000406659 SLC36A2Q495M3 483 aa21.86■■□□□ 1.09
DNMT3A-206ENST00000406659 GLRX5Q86SX6 157 aa21.86■■□□□ 1.09
DNMT3A-206ENST00000406659 SLC39A7Q92504 469 aa21.86■■□□□ 1.09
DNMT3A-206ENST00000406659 HAVCR1Q96D42 359 aa21.86■■□□□ 1.09
DNMT3A-206ENST00000406659 FAM173AQ9BQD7 235 aa21.86■■□□□ 1.09
DNMT3A-206ENST00000406659 SF3B5Q9BWJ5 86 aaKnown RBP21.86■■□□□ 1.09
DNMT3A-206ENST00000406659 B3GNT4Q9C0J1 378 aa21.86■■□□□ 1.09
DNMT3A-206ENST00000406659 OR2B2Q9GZK3 357 aa21.86■■□□□ 1.09
DNMT3A-206ENST00000406659 PBOV1Q9GZY1 135 aa21.86■■□□□ 1.09
DNMT3A-206ENST00000406659 NIPAL2Q9H841 368 aa21.86■■□□□ 1.09
DNMT3A-206ENST00000406659 ASH2LQ9UBL3 628 aa21.86■■□□□ 1.09
DNMT3A-206ENST00000406659 CDV3Q9UKY7 258 aaKnown RBP21.86■■□□□ 1.09
DNMT3A-206ENST00000406659 SULT1B1O43704 296 aa21.85■■□□□ 1.09
DNMT3A-206ENST00000406659 CFPP27918 469 aa21.85■■□□□ 1.09
DNMT3A-206ENST00000406659 SRP9P49458 86 aaKnown RBP21.85■■□□□ 1.09
DNMT3A-206ENST00000406659 NUBP1P53384 320 aa21.85■■□□□ 1.09
DNMT3A-206ENST00000406659 AIMP2Q13155 320 aaKnown RBP21.85■■□□□ 1.09
DNMT3A-206ENST00000406659 GLT8D1Q68CQ7 371 aa21.85■■□□□ 1.09
DNMT3A-206ENST00000406659 RHOUQ7L0Q8 258 aa21.85■■□□□ 1.09
DNMT3A-206ENST00000406659 ELMOD2Q8IZ81 293 aa21.85■■□□□ 1.09
DNMT3A-206ENST00000406659 IL22RA1Q8N6P7 574 aa21.85■■□□□ 1.09
DNMT3A-206ENST00000406659 SMIM4Q8WVI0 70 aa21.85■■□□□ 1.09
DNMT3A-206ENST00000406659 INTS12Q96CB8 462 aaKnown RBP21.85■■□□□ 1.09
DNMT3A-206ENST00000406659 PARD6AQ9NPB6 346 aa21.85■■□□□ 1.09
DNMT3A-206ENST00000406659 SLC17A2O00624 439 aa21.84■■□□□ 1.09
DNMT3A-206ENST00000406659 SMAD9O15198 467 aaKnown RBP21.84■■□□□ 1.09
DNMT3A-206ENST00000406659 IGFBP3P17936 291 aaPredicted RBP21.84■■□□□ 1.09
DNMT3A-206ENST00000406659 POU3F2P20265 443 aaPredicted RBP21.84■■□□□ 1.09
DNMT3A-206ENST00000406659 FOXO1Q12778 655 aa21.84■■□□□ 1.09
DNMT3A-206ENST00000406659 TMEM69Q5SWH9 247 aa21.84■■□□□ 1.09
DNMT3A-206ENST00000406659 C10orf128Q5T292 105 aa21.84■■□□□ 1.09
DNMT3A-206ENST00000406659 ASPHD2Q6ICH7 369 aa21.84■■□□□ 1.09
DNMT3A-206ENST00000406659 LUZP2Q86TE4 346 aa21.84■■□□□ 1.09
DNMT3A-206ENST00000406659 GGNQ86UU5 652 aa21.84■■□□□ 1.09
DNMT3A-206ENST00000406659 TMEM123Q8N131 208 aa21.84■■□□□ 1.09
DNMT3A-206ENST00000406659 ZIC4Q8N9L1 334 aa21.84■■□□□ 1.09
DNMT3A-206ENST00000406659 PCNX2A6NKB5 2137 aa21.84■■□□□ 1.09
DNMT3A-206ENST00000406659 AHCTF1Q8WYP5 2266 aa21.84■■□□□ 1.09
DNMT3A-206ENST00000406659 MEGF11A6BM72 1044 aa21.84■■□□□ 1.09
DNMT3A-206ENST00000406659 ACSM4P0C7M7 580 aa21.84■■□□□ 1.09
DNMT3A-206ENST00000406659 CSRP1P21291 193 aaKnown RBP21.84■■□□□ 1.09
DNMT3A-206ENST00000406659 CDK2P24941 298 aa21.84■■□□□ 1.09
DNMT3A-206ENST00000406659 SLC6A1P30531 599 aa21.84■■□□□ 1.09
DNMT3A-206ENST00000406659 LSM6P62312 80 aaKnown RBP21.84■■□□□ 1.09
DNMT3A-206ENST00000406659 PHYHD1Q5SRE7 291 aa21.84■■□□□ 1.09
DNMT3A-206ENST00000406659 HMX3A6NHT5 357 aa21.83■■□□□ 1.09
DNMT3A-206ENST00000406659 NEURL1O76050 574 aa21.83■■□□□ 1.09
DNMT3A-206ENST00000406659 TTRP02766 147 aa21.83■■□□□ 1.09
DNMT3A-206ENST00000406659 MSR1P21757 451 aa21.83■■□□□ 1.09
DNMT3A-206ENST00000406659 STARP49675 285 aa21.83■■□□□ 1.09
DNMT3A-206ENST00000406659 ZNF133P52736 654 aaPredicted RBP21.83■■□□□ 1.09
DNMT3A-206ENST00000406659 MTFR2Q6P444 385 aa21.83■■□□□ 1.09
DNMT3A-206ENST00000406659 SIAH3Q8IW03 269 aa21.83■■□□□ 1.09
DNMT3A-206ENST00000406659 PLPP7Q8NBV4 271 aa21.83■■□□□ 1.09
DNMT3A-206ENST00000406659 OR2M7Q8NG81 312 aa21.83■■□□□ 1.09
DNMT3A-206ENST00000406659 OR51D1Q8NGF3 324 aa21.83■■□□□ 1.09
DNMT3A-206ENST00000406659 OR2V1Q8NHB1 315 aa21.83■■□□□ 1.09
DNMT3A-206ENST00000406659 UBASH3BQ8TF42 649 aa21.83■■□□□ 1.09
DNMT3A-206ENST00000406659 C15orf40Q8WUR7 153 aa21.83■■□□□ 1.09
DNMT3A-206ENST00000406659 NKD1Q969G9 470 aa21.83■■□□□ 1.09
DNMT3A-206ENST00000406659 FER1L6-AS2Q96M78 137 aa21.83■■□□□ 1.09
DNMT3A-206ENST00000406659 SIGLEC12Q96PQ1 595 aa21.83■■□□□ 1.09
DNMT3A-206ENST00000406659 MARVELD1Q9BSK0 173 aa21.83■■□□□ 1.09
DNMT3A-206ENST00000406659 NCKAP5O14513 1909 aa21.83■■□□□ 1.08
DNMT3A-206ENST00000406659 RER1O15258 196 aa21.82■■□□□ 1.08
DNMT3A-206ENST00000406659 ORC5O43913 435 aa21.82■■□□□ 1.08
DNMT3A-206ENST00000406659 CXCL13O43927 109 aa21.82■■□□□ 1.08
DNMT3A-206ENST00000406659 ITGA5P08648 1049 aa21.82■■□□□ 1.08
DNMT3A-206ENST00000406659 SELENOPP49908 381 aa21.82■■□□□ 1.08
DNMT3A-206ENST00000406659 SUCLG1P53597 346 aaKnown RBP21.82■■□□□ 1.08
DNMT3A-206ENST00000406659 PSMA6P60900 246 aaKnown RBP21.82■■□□□ 1.08
DNMT3A-206ENST00000406659 CLEC1AQ8NC01 280 aa21.82■■□□□ 1.08
DNMT3A-206ENST00000406659 DEFB124Q8NES8 71 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms