RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 SNAPINO95295 136 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 STAMBPO95630 424 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 THY1P04216 161 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 SERPIND1P05546 499 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 ASGR1P07306 291 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 CCNB1P14635 433 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 NQO1P15559 274 aaKnown RBP3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 PGAM1P18669 254 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 CD52P31358 61 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 OTX1P32242 354 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 VHLP40337 213 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 KPNA2P52292 529 aaKnown RBP3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 ACLYP53396 1101 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 RGS8P57771 180 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 TPI1P60174 286 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 TGM3Q08188 693 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 PPIDQ08752 370 aaKnown RBP3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 NAB1Q13506 487 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 EIF4EBP2Q13542 120 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 GOLGB1Q14789 3259 aaKnown RBP3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 KIAA0040Q15053 153 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 TGFBIQ15582 683 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 SNCBQ16143 134 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 LPAL2Q16609 132 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 NSUN5P1Q3KNT7 163 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 VPS26BQ4G0F5 336 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 BCL7AQ4VC05 210 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 KLF17Q5JT82 389 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 UTF1Q5T230 341 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 LRRC66Q68CR7 880 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 ZNF567Q8N184 647 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 TPRX1Q8N7U7 411 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 OR2L3Q8NG85 312 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 OR4K14Q8NGD5 310 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 FAM81AQ8TBF8 368 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 SLC22A8Q8TCC7 542 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 ACMSDQ8TDX5 336 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 TSEN15Q8WW01 171 aaKnown RBP3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 SMARCD1Q96GM5 515 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 ZNF578Q96N58 590 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 FOXN4Q96NZ1 517 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 VAT1Q99536 393 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 PKMYT1Q99640 499 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 EHD1Q9H4M9 534 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 PTGES2Q9H7Z7 377 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 UGT1A7Q9HAW7 530 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 UGT1A10Q9HAW8 530 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 UGT1A8Q9HAW9 530 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 PLGRKTQ9HBL7 147 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 SAR1AQ9NR31 198 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 DDIT4Q9NX09 232 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 OR12D3Q9UGF7 316 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 DICER1Q9UPY3 1922 aaKnown RBP3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 V9GY05 133 aa3.57□□□□□ -1.84
HMGB3P18-201ENST00000406327 PTPRFP10586 1907 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 SBF1O95248 1867 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 DOCK5Q9H7D0 1870 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 H0YIV9 168 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 I3L4J1 428 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 WRBO00258 174 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 CACNG3O60359 315 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 ATP6V1G2O95670 118 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 IGLV3-25P01717 112 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 FGF1P05230 155 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 C2P06681 752 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 BPGMP07738 259 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 KRT16P08779 473 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 PABPC4LP0CB38 370 aaKnown RBP3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 NEFHP12036 1026 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 TBPP20226 339 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 KITLGP21583 273 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 BGNP21810 368 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 KIR2DS4P43632 304 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 MNAT1P51948 309 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 BIDP55957 195 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 RPS14P62263 151 aaKnown RBP3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 ERVK-25P63136 954 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 CRADDP78560 199 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 ZNF33AQ06730 810 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 STX3Q13277 289 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 IL18Q14116 193 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 PRPSAP1Q14558 356 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 SPANXN3Q5MJ09 141 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 BRMS1LQ5PSV4 323 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 TIGD3Q6B0B8 471 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 UNQ9370/PRO34162Q6UXP9 181 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 HSD17B13Q7Z5P4 300 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 BIVMQ86UB2 503 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 TMEM135Q86UB9 458 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 CDC20BQ86Y33 519 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 ZNF100Q8IYN0 542 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 KIF2BQ8N4N8 673 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 NPWQ8N729 165 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 ACOT4Q8N9L9 421 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 OR7G2Q8NG99 324 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 OR4F6Q8NGB9 312 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 OR2AP1Q8NGE2 309 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 OR1E3Q8WZA6 343 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 CDKL2Q92772 493 aa3.56□□□□□ -1.84
HMGB3P18-201ENST00000406327 SLC25A38Q96DW6 304 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms