RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 NICN1Q9BSH3 213 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 BCL2L14Q9BZR8 327 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 OR51J1Q9H342 316 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 CENPHQ9H3R5 247 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 ASB8Q9H765 288 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 LZTFL1Q9NQ48 299 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 PXMP2Q9NR77 195 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 CHRAC1Q9NRG0 131 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 LGALS13Q9UHV8 139 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 ING4Q9UNL4 249 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 ERGIC3Q9Y282 383 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 NEUROG3Q9Y4Z2 214 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 CDH10Q9Y6N8 788 aa3.55□□□□□ -1.84
HMGB1P13-201ENST00000406019 CNTLNQ9NXG0 1405 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 MSH6P52701 1360 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 IGKV1D-13A0A0B4J2D9 117 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 GSTTP1A0A1W2PQM5 241 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 ZNF726A6NNF4 738 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 ZNF99A8MXY4 864 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 ZBTB5O15062 677 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 COCHO43405 550 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 CD160O95971 181 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 SERPINA5P05154 406 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 KRT7P08729 469 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 IGKV1-13P0DP09 117 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 FOLR1P15328 257 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 NQO2P16083 231 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 PSMB1P20618 241 aaKnown RBP3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 MAGP20916 626 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 CD40LGP29965 261 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 SUB1P53999 127 aaKnown RBP eCLIP3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 UBE2G2P60604 165 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 ANGPT1Q15389 498 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 ACTBL2Q562R1 376 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 ZNF470Q6ECI4 717 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 TTC33Q6PID6 262 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 CYP4Z1Q86W10 505 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 PRSS58Q8IYP2 241 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 SLC39A11Q8N1S5 342 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 ZADH2Q8N4Q0 377 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 JAGN1Q8N5M9 183 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 PRELID2Q8N945 189 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 OR7G1Q8NGA0 311 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 OR56A4Q8NGH8 313 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 LYPD6BQ8NI32 183 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 MITD1Q8WV92 249 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 MYDGFQ969H8 173 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 FCRL1Q96LA6 429 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 JSRP1Q96MG2 331 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 DHRS9Q9BPW9 319 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 CHID1Q9BWS9 393 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 UCK2Q9BZX2 261 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 ACTR3CQ9C0K3 210 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 HDHD2Q9H0R4 259 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 SRMSQ9H3Y6 488 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 ZNF302Q9NR11 478 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 SLC7A10Q9NS82 523 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 PRR34Q9NV39 138 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 HRASLS2Q9NWW9 162 aa3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 RBAKQ9NYW8 714 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 STOX2Q9P2F5 926 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 FAM32AQ9Y421 112 aaKnown RBP3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 COL22A1Q8NFW1 1626 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P13-201ENST00000406019 POLR3AO14802 1390 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 A0A0J9YYE9 177 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 KLF18A0A0U1RQI7 1052 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 PSMB11A5LHX3 300 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 EPOPA6NHQ4 379 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 M0R3G1 203 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 SLC9A3R1O14745 358 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 POLR1CO15160 346 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 CLDN11O75508 207 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 FCN3O75636 299 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 RAB3DO95716 219 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 CRYZL1O95825 349 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 TRBC1P01850 177 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 HLA-HP01893 362 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 CCL2P13500 99 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 COX7A1P24310 79 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 SLC1A2P43004 574 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 BCAP31P51572 246 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 APOC4P55056 127 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 TAS2R19P59542 299 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 LRRC63Q05C16 580 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 ZNF33AQ06730 810 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 RCAN2Q14206 197 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 PDK2Q15119 407 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 SF3A2Q15428 464 aaKnown RBP3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 MFSD14CQ5VZR4 134 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 H3F3CQ6NXT2 135 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 SPESP1Q6UW49 350 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 C3orf62Q6ZUJ4 267 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 CEND1Q8N111 149 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 ZNF786Q8N393 782 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 LRRC75AQ8NAA5 344 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 PROKR2Q8NFJ6 384 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 OR4A15Q8NGL6 344 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 ZNF502Q8TBZ5 544 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 ARPC1AQ92747 370 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 MRGPRFQ96AM1 343 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms