RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 PAX7P23759 505 aa28.92■■■□□ 2.22
CSNK1E-204ENST00000403904 APEX1P27695 318 aaKnown RBP28.92■■■□□ 2.22
CSNK1E-204ENST00000403904 CSNK2BP67870 215 aa28.92■■■□□ 2.22
CSNK1E-204ENST00000403904 ELFN2Q5R3F8 820 aa28.92■■■□□ 2.22
CSNK1E-204ENST00000403904 OR2T27Q8NH04 317 aa28.92■■■□□ 2.22
CSNK1E-204ENST00000403904 MOV10Q9HCE1 1003 aaKnown RBP28.92■■■□□ 2.22
CSNK1E-204ENST00000403904 HEATR1Q9H583 2144 aaKnown RBP28.92■■■□□ 2.22
CSNK1E-204ENST00000403904 IQCMA0A1B0GVH7 501 aa28.92■■■□□ 2.22
CSNK1E-204ENST00000403904 CASKO14936 926 aa28.92■■■□□ 2.22
CSNK1E-204ENST00000403904 SYNGR3O43761 229 aa28.92■■■□□ 2.22
CSNK1E-204ENST00000403904 RAB35Q15286 201 aa28.92■■■□□ 2.22
CSNK1E-204ENST00000403904 ZNF540Q8NDQ6 660 aa28.92■■■□□ 2.22
CSNK1E-204ENST00000403904 NGBQ9NPG2 151 aa28.92■■■□□ 2.22
CSNK1E-204ENST00000403904 CENPMQ9NSP4 180 aa28.92■■■□□ 2.22
CSNK1E-204ENST00000403904 A0A1W2PQL4 384 aaPredicted RBP28.91■■■□□ 2.22
CSNK1E-204ENST00000403904 CECR9P0C854 216 aa28.91■■■□□ 2.22
CSNK1E-204ENST00000403904 HTR5AP47898 357 aa28.91■■■□□ 2.22
CSNK1E-204ENST00000403904 AHSA2Q719I0 299 aa28.91■■■□□ 2.22
CSNK1E-204ENST00000403904 SSX6Q7RTT6 188 aa28.91■■■□□ 2.22
CSNK1E-204ENST00000403904 MNTQ99583 582 aa28.91■■■□□ 2.22
CSNK1E-204ENST00000403904 SCN3BQ9NY72 215 aa28.91■■■□□ 2.22
CSNK1E-204ENST00000403904 PCDHGB1Q9Y5G3 927 aa28.91■■■□□ 2.22
CSNK1E-204ENST00000403904 PTGES3LE9PB15 166 aa28.9■■■□□ 2.22
CSNK1E-204ENST00000403904 ZNF670-ZNF695F2Z2N8 137 aa28.9■■■□□ 2.22
CSNK1E-204ENST00000403904 CCDC159P0C7I6 412 aa28.9■■■□□ 2.22
CSNK1E-204ENST00000403904 CCL2P13500 99 aa28.9■■■□□ 2.22
CSNK1E-204ENST00000403904 CRYGSP22914 178 aa28.9■■■□□ 2.22
CSNK1E-204ENST00000403904 OR1F12Q8NHA8 337 aa28.9■■■□□ 2.22
CSNK1E-204ENST00000403904 SLC7A6Q92536 515 aa28.9■■■□□ 2.22
CSNK1E-204ENST00000403904 PSMG3-AS1Q96PY0 264 aa28.9■■■□□ 2.22
CSNK1E-204ENST00000403904 HDHD2Q9H0R4 259 aa28.9■■■□□ 2.22
CSNK1E-204ENST00000403904 FGF20Q9NP95 211 aaPredicted RBP28.9■■■□□ 2.22
CSNK1E-204ENST00000403904 CNOT2Q9NZN8 540 aaKnown RBP28.9■■■□□ 2.22
CSNK1E-204ENST00000403904 FBXL3Q9UKT7 428 aa28.9■■■□□ 2.22
CSNK1E-204ENST00000403904 OR6C6A6NF89 314 aa28.89■■■□□ 2.22
CSNK1E-204ENST00000403904 EFCAB10A6NFE3 127 aa28.89■■■□□ 2.22
CSNK1E-204ENST00000403904 PRR32B1ATL7 298 aa28.89■■■□□ 2.22
CSNK1E-204ENST00000403904 PSMD9O00233 223 aa28.89■■■□□ 2.22
CSNK1E-204ENST00000403904 ADRA2AP08913 450 aa28.89■■■□□ 2.22
CSNK1E-204ENST00000403904 STOMP27105 288 aa28.89■■■□□ 2.22
CSNK1E-204ENST00000403904 ST3GAL4Q11206 333 aa28.89■■■□□ 2.22
CSNK1E-204ENST00000403904 SP5Q6BEB4 398 aaPredicted RBP28.89■■■□□ 2.22
CSNK1E-204ENST00000403904 ACBD7Q8N6N7 88 aa28.89■■■□□ 2.22
CSNK1E-204ENST00000403904 SLC30A7Q8NEW0 376 aa28.89■■■□□ 2.22
CSNK1E-204ENST00000403904 FAM222BQ8WU58 562 aa28.89■■■□□ 2.22
CSNK1E-204ENST00000403904 RNF133Q8WVZ7 376 aa28.89■■■□□ 2.22
CSNK1E-204ENST00000403904 ATF6BQ99941 703 aa28.89■■■□□ 2.22
CSNK1E-204ENST00000403904 SPOCK3Q9BQ16 436 aa28.89■■■□□ 2.22
CSNK1E-204ENST00000403904 CADP27708 2225 aa28.89■■■□□ 2.21
CSNK1E-204ENST00000403904 LOC100509620A0A075B734 347 aa28.88■■■□□ 2.21
CSNK1E-204ENST00000403904 PIPP12273 146 aaPredicted RBP28.88■■■□□ 2.21
CSNK1E-204ENST00000403904 CRHBPP24387 322 aa28.88■■■□□ 2.21
CSNK1E-204ENST00000403904 ACTC1P68032 377 aa28.88■■■□□ 2.21
CSNK1E-204ENST00000403904 ACTA1P68133 377 aa28.88■■■□□ 2.21
CSNK1E-204ENST00000403904 MVKQ03426 396 aa28.88■■■□□ 2.21
CSNK1E-204ENST00000403904 C3orf36Q3SXR2 165 aa28.88■■■□□ 2.21
CSNK1E-204ENST00000403904 PAK1IP1Q9NWT1 392 aaPredicted RBP28.88■■■□□ 2.21
CSNK1E-204ENST00000403904 DAPL1A0PJW8 107 aa28.88■■■□□ 2.21
CSNK1E-204ENST00000403904 IRGMA1A4Y4 181 aa28.88■■■□□ 2.21
CSNK1E-204ENST00000403904 DPRXA6NFQ7 191 aa28.88■■■□□ 2.21
CSNK1E-204ENST00000403904 MAGEB4O15481 346 aaPredicted RBP28.88■■■□□ 2.21
CSNK1E-204ENST00000403904 PTHP01270 115 aa28.88■■■□□ 2.21
CSNK1E-204ENST00000403904 IGHA1P01876 353 aa28.88■■■□□ 2.21
CSNK1E-204ENST00000403904 APLNRP35414 380 aa28.88■■■□□ 2.21
CSNK1E-204ENST00000403904 ZNF85Q03923 595 aa28.88■■■□□ 2.21
CSNK1E-204ENST00000403904 RBM48Q5RL73 367 aaKnown RBP28.88■■■□□ 2.21
CSNK1E-204ENST00000403904 ZNF322Q6U7Q0 402 aaPredicted RBP28.88■■■□□ 2.21
CSNK1E-204ENST00000403904 TMEM108Q6UXF1 575 aa28.88■■■□□ 2.21
CSNK1E-204ENST00000403904 LRRN1Q6UXK5 716 aa28.88■■■□□ 2.21
CSNK1E-204ENST00000403904 SGCDQ92629 289 aa28.88■■■□□ 2.21
CSNK1E-204ENST00000403904 COPS4Q9BT78 406 aa28.88■■■□□ 2.21
CSNK1E-204ENST00000403904 FKBP14Q9NWM8 211 aa28.88■■■□□ 2.21
CSNK1E-204ENST00000403904 TPRKBQ9Y3C4 175 aa28.88■■■□□ 2.21
CSNK1E-204ENST00000403904 ZNF878C9JN71 531 aa28.87■■■□□ 2.21
CSNK1E-204ENST00000403904 PHYHO14832 338 aa28.87■■■□□ 2.21
CSNK1E-204ENST00000403904 DBHP09172 617 aa28.87■■■□□ 2.21
CSNK1E-204ENST00000403904 COX5BP10606 129 aa28.87■■■□□ 2.21
CSNK1E-204ENST00000403904 CCNOP22674 350 aa28.87■■■□□ 2.21
CSNK1E-204ENST00000403904 CD40P25942 277 aa28.87■■■□□ 2.21
CSNK1E-204ENST00000403904 LHFPL3Q86UP9 236 aa28.87■■■□□ 2.21
CSNK1E-204ENST00000403904 ASB17Q8WXJ9 295 aa28.87■■■□□ 2.21
CSNK1E-204ENST00000403904 PLPPR2Q96GM1 343 aa28.87■■■□□ 2.21
CSNK1E-204ENST00000403904 TMEM80Q96HE8 168 aa28.87■■■□□ 2.21
CSNK1E-204ENST00000403904 POM121L2Q96KW2 1035 aa28.87■■■□□ 2.21
CSNK1E-204ENST00000403904 COQ7Q99807 217 aa28.87■■■□□ 2.21
CSNK1E-204ENST00000403904 DDX28Q9NUL7 540 aaKnown RBP28.87■■■□□ 2.21
CSNK1E-204ENST00000403904 SLCO1C1Q9NYB5 712 aa28.87■■■□□ 2.21
CSNK1E-204ENST00000403904 PKDREJQ9NTG1 2253 aa28.86■■■□□ 2.21
CSNK1E-204ENST00000403904 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP28.86■■■□□ 2.21
CSNK1E-204ENST00000403904 C5orf49A4QMS7 147 aa28.86■■■□□ 2.21
CSNK1E-204ENST00000403904 SIAH2O43255 324 aa28.86■■■□□ 2.21
CSNK1E-204ENST00000403904 DCKP27707 260 aa28.86■■■□□ 2.21
CSNK1E-204ENST00000403904 BSPH1Q075Z2 132 aa28.86■■■□□ 2.21
CSNK1E-204ENST00000403904 TAF13Q15543 124 aa28.86■■■□□ 2.21
CSNK1E-204ENST00000403904 RSPO1Q2MKA7 263 aaPredicted RBP28.86■■■□□ 2.21
CSNK1E-204ENST00000403904 KCTD18Q6PI47 426 aaPredicted RBP28.86■■■□□ 2.21
CSNK1E-204ENST00000403904 STX19Q8N4C7 294 aa28.86■■■□□ 2.21
CSNK1E-204ENST00000403904 DIMT1Q9UNQ2 313 aaKnown RBP28.86■■■□□ 2.21
CSNK1E-204ENST00000403904 LRCH1Q9Y2L9 728 aa28.86■■■□□ 2.21
CSNK1E-204ENST00000403904 PTAFRP25105 342 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms