RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 AGAP4Q96P64 663 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 UTP23Q9BRU9 249 aaKnown RBP10.86□□□□□ -0.67
CLIP4-203ENST00000401617 NIPAL2Q9H841 368 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 SEC61A2Q9H9S3 476 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 NPAP1Q9NZP6 1156 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 PTPRBP23467 1997 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 ANXA2P2A6NMY6 339 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 ZNF878C9JN71 531 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 TPPPO94811 219 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 ANXA2P07355 339 aaKnown RBP10.86□□□□□ -0.67
CLIP4-203ENST00000401617 UBCP0CG48 685 aaKnown RBP10.86□□□□□ -0.67
CLIP4-203ENST00000401617 MNDAP41218 407 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 TCF15Q12870 199 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 SLC36A2Q495M3 483 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 WIPI1Q5MNZ9 446 aaPredicted RBP10.86□□□□□ -0.67
CLIP4-203ENST00000401617 C20orf196Q8IYI0 205 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 ELMOD2Q8IZ81 293 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 DNAAF1Q8NEP3 725 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 OR2V1Q8NHB1 315 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 SLC39A7Q92504 469 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 YIPF5Q969M3 257 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 FER1L6-AS2Q96M78 137 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 SFXN2Q96NB2 322 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 ABI3Q9P2A4 366 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 STEAP1Q9UHE8 339 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 GTF2A1LQ9UNN4 478 aa10.86□□□□□ -0.67
CLIP4-203ENST00000401617 LOC107986453A0A1B0GWG9 222 aa10.85□□□□□ -0.67
CLIP4-203ENST00000401617 H3BSH0 61 aa10.85□□□□□ -0.67
CLIP4-203ENST00000401617 WDPCPO95876 746 aa10.85□□□□□ -0.67
CLIP4-203ENST00000401617 F10P00742 488 aa10.85□□□□□ -0.67
CLIP4-203ENST00000401617 TTRP02766 147 aa10.85□□□□□ -0.67
CLIP4-203ENST00000401617 MAS1P04201 325 aa10.85□□□□□ -0.67
CLIP4-203ENST00000401617 HPNP05981 417 aa10.85□□□□□ -0.67
CLIP4-203ENST00000401617 CD2P06729 351 aa10.85□□□□□ -0.67
CLIP4-203ENST00000401617 CTSSP25774 331 aa10.85□□□□□ -0.67
CLIP4-203ENST00000401617 ITGA3P26006 1051 aa10.85□□□□□ -0.67
CLIP4-203ENST00000401617 GDF1P27539 372 aa10.85□□□□□ -0.67
CLIP4-203ENST00000401617 CLDN12P56749 244 aa10.85□□□□□ -0.67
CLIP4-203ENST00000401617 GABREP78334 506 aa10.85□□□□□ -0.67
CLIP4-203ENST00000401617 TMPRSS12Q86WS5 348 aa10.85□□□□□ -0.67
CLIP4-203ENST00000401617 OR2AJ1Q8NGZ0 328 aa10.85□□□□□ -0.67
CLIP4-203ENST00000401617 NABP1Q96AH0 204 aa10.85□□□□□ -0.67
CLIP4-203ENST00000401617 HAVCR1Q96D42 359 aa10.85□□□□□ -0.67
CLIP4-203ENST00000401617 MMP28Q9H239 520 aa10.85□□□□□ -0.67
CLIP4-203ENST00000401617 DDX28Q9NUL7 540 aaKnown RBP10.85□□□□□ -0.67
CLIP4-203ENST00000401617 NUFIP1Q9UHK0 495 aaKnown RBP10.85□□□□□ -0.67
CLIP4-203ENST00000401617 CLEC4AQ9UMR7 237 aa10.85□□□□□ -0.67
CLIP4-203ENST00000401617 RCE1Q9Y256 329 aa10.85□□□□□ -0.67
CLIP4-203ENST00000401617 ZNF716A6NP11 495 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 EIF1AYO14602 144 aaKnown RBP10.84□□□□□ -0.67
CLIP4-203ENST00000401617 EEF1E1O43324 174 aaKnown RBP10.84□□□□□ -0.67
CLIP4-203ENST00000401617 SULT1B1O43704 296 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 ACSM4P0C7M7 580 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 SELENOPP49908 381 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 PSMA6P60900 246 aaKnown RBP10.84□□□□□ -0.67
CLIP4-203ENST00000401617 HIST1H3AP68431 136 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 OR1C1Q15619 314 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 BCL2L15Q5TBC7 163 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 HIST2H3PS2Q5TEC6 136 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 ABLIM2Q6H8Q1 611 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 KLHL24Q6TFL4 600 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 HIST2H3AQ71DI3 136 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 IL22RA1Q8N6P7 574 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 OR6N1Q8NGY5 312 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 PBOV1Q9GZY1 135 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 HDHD2Q9H0R4 259 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 ZNF703Q9H7S9 590 aaPredicted RBP10.84□□□□□ -0.67
CLIP4-203ENST00000401617 MOB1AQ9H8S9 216 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 ASH2LQ9UBL3 628 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 FLVCR1Q9Y5Y0 555 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 SLC17A2O00624 439 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 DHHO43323 396 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 TRAPPC6AO75865 159 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 MSR1P21757 451 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 EIF1AXP47813 144 aaKnown RBP10.84□□□□□ -0.67
CLIP4-203ENST00000401617 PTH2RP49190 550 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 SOX8P57073 446 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 DGCR2P98153 550 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 ENDOGQ14249 297 aaKnown RBP10.84□□□□□ -0.67
CLIP4-203ENST00000401617 GPR176Q14439 515 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 ZNF57Q68EA5 555 aaPredicted RBP10.84□□□□□ -0.67
CLIP4-203ENST00000401617 LYPD6Q86Y78 171 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 SULF2Q8IWU5 870 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 OR10D3Q8NH80 312 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 ENKURQ8TC29 256 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 SMIM4Q8WVI0 70 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 HPS1Q92902 700 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 SLC25A28Q96A46 364 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 PNPLA2Q96AD5 504 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 ZNF416Q9BWM5 594 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 NELFAQ9H3P2 528 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 RNF121Q9H920 327 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 PLEKHA1Q9HB21 404 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 POLR1DQ9Y2S0 133 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 RTTNQ86VV8 2226 aa10.84□□□□□ -0.67
CLIP4-203ENST00000401617 A0A1B0GTI1 187 aa10.83□□□□□ -0.68
CLIP4-203ENST00000401617 SPAARA0A1B0GVQ0 90 aa10.83□□□□□ -0.68
CLIP4-203ENST00000401617 MEIOCA2RUB1 952 aa10.83□□□□□ -0.68
CLIP4-203ENST00000401617 MEGF11A6BM72 1044 aa10.83□□□□□ -0.68
CLIP4-203ENST00000401617 P2RY10O00398 339 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms