RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 NOSIPQ9Y314 301 aaKnown RBP22.59■■□□□ 1.21
CPNE1-205ENST00000401607 AKAP13Q12802 2813 aa22.59■■□□□ 1.21
CPNE1-205ENST00000401607 NOTOA8MTQ0 251 aa22.58■■□□□ 1.21
CPNE1-205ENST00000401607 HPGDSO60760 199 aa22.58■■□□□ 1.21
CPNE1-205ENST00000401607 PPP3R1P63098 170 aa22.58■■□□□ 1.21
CPNE1-205ENST00000401607 RIPPLY2Q5TAB7 128 aa22.58■■□□□ 1.21
CPNE1-205ENST00000401607 IGFL3Q6UXB1 125 aa22.58■■□□□ 1.21
CPNE1-205ENST00000401607 CPT1CQ8TCG5 803 aa22.58■■□□□ 1.21
CPNE1-205ENST00000401607 KCTD12Q96CX2 325 aaKnown RBP22.58■■□□□ 1.21
CPNE1-205ENST00000401607 BCO1Q9HAY6 547 aa22.58■■□□□ 1.21
CPNE1-205ENST00000401607 TNRC6AQ8NDV7 1962 aaKnown RBP22.58■■□□□ 1.2
CPNE1-205ENST00000401607 SLC2A2P11168 524 aaPredicted RBP22.58■■□□□ 1.2
CPNE1-205ENST00000401607 MZT2AQ6P582 158 aa22.58■■□□□ 1.2
CPNE1-205ENST00000401607 KLHL24Q6TFL4 600 aa22.58■■□□□ 1.2
CPNE1-205ENST00000401607 TUSC5Q8IXB3 177 aa22.58■■□□□ 1.2
CPNE1-205ENST00000401607 TMEM106AQ96A25 262 aa22.58■■□□□ 1.2
CPNE1-205ENST00000401607 SDHCQ99643 169 aaPredicted RBP22.58■■□□□ 1.2
CPNE1-205ENST00000401607 PRRG4Q9BZD6 226 aa22.58■■□□□ 1.2
CPNE1-205ENST00000401607 RNF122Q9H9V4 155 aa22.58■■□□□ 1.2
CPNE1-205ENST00000401607 EMC3Q9P0I2 261 aa22.58■■□□□ 1.2
CPNE1-205ENST00000401607 DOK2O60496 412 aa22.57■■□□□ 1.2
CPNE1-205ENST00000401607 RAF1P04049 648 aa22.57■■□□□ 1.2
CPNE1-205ENST00000401607 EPXP11678 715 aa22.57■■□□□ 1.2
CPNE1-205ENST00000401607 SDHBP21912 280 aa22.57■■□□□ 1.2
CPNE1-205ENST00000401607 HIST1H3AP68431 136 aa22.57■■□□□ 1.2
CPNE1-205ENST00000401607 HIST2H3PS2Q5TEC6 136 aa22.57■■□□□ 1.2
CPNE1-205ENST00000401607 FAM27BQ5VT28 67 aa22.57■■□□□ 1.2
CPNE1-205ENST00000401607 HIST2H3AQ71DI3 136 aa22.57■■□□□ 1.2
CPNE1-205ENST00000401607 LRRC18Q8N456 261 aa22.57■■□□□ 1.2
CPNE1-205ENST00000401607 ZADH2Q8N4Q0 377 aa22.57■■□□□ 1.2
CPNE1-205ENST00000401607 TSEN15Q8WW01 171 aaKnown RBP22.57■■□□□ 1.2
CPNE1-205ENST00000401607 TMEM38BQ9NVV0 291 aa22.57■■□□□ 1.2
CPNE1-205ENST00000401607 LOC400499M0QZD8 3231 aa22.56■■□□□ 1.2
CPNE1-205ENST00000401607 ANKRD61A6NGH8 418 aa22.56■■□□□ 1.2
CPNE1-205ENST00000401607 ZNF724A8MTY0 619 aa22.56■■□□□ 1.2
CPNE1-205ENST00000401607 UPK1BO75841 260 aa22.56■■□□□ 1.2
CPNE1-205ENST00000401607 WISP2O76076 250 aa22.56■■□□□ 1.2
CPNE1-205ENST00000401607 ISG15P05161 165 aa22.56■■□□□ 1.2
CPNE1-205ENST00000401607 ATF1P18846 271 aa22.56■■□□□ 1.2
CPNE1-205ENST00000401607 PSMA6P60900 246 aaKnown RBP22.56■■□□□ 1.2
CPNE1-205ENST00000401607 ZNF79Q15937 498 aa22.56■■□□□ 1.2
CPNE1-205ENST00000401607 BCL2L15Q5TBC7 163 aa22.56■■□□□ 1.2
CPNE1-205ENST00000401607 TSPO2Q5TGU0 170 aa22.56■■□□□ 1.2
CPNE1-205ENST00000401607 STAC2Q6ZMT1 411 aa22.56■■□□□ 1.2
CPNE1-205ENST00000401607 DIRAS2Q96HU8 199 aa22.56■■□□□ 1.2
CPNE1-205ENST00000401607 NIPAL2Q9H841 368 aa22.56■■□□□ 1.2
CPNE1-205ENST00000401607 GPR35Q9HC97 309 aa22.56■■□□□ 1.2
CPNE1-205ENST00000401607 BRD7Q9NPI1 651 aa22.56■■□□□ 1.2
CPNE1-205ENST00000401607 DDX28Q9NUL7 540 aaKnown RBP22.56■■□□□ 1.2
CPNE1-205ENST00000401607 CLEC4AQ9UMR7 237 aa22.56■■□□□ 1.2
CPNE1-205ENST00000401607 CAMK2AQ9UQM7 478 aa22.56■■□□□ 1.2
CPNE1-205ENST00000401607 TBX1O43435 398 aa22.55■■□□□ 1.2
CPNE1-205ENST00000401607 MRPL33O75394 65 aaKnown RBP22.55■■□□□ 1.2
CPNE1-205ENST00000401607 NPR2P20594 1047 aa22.55■■□□□ 1.2
CPNE1-205ENST00000401607 HSD11B1P28845 292 aa22.55■■□□□ 1.2
CPNE1-205ENST00000401607 CHMP1BQ7LBR1 199 aa22.55■■□□□ 1.2
CPNE1-205ENST00000401607 LRRTM1Q86UE6 522 aa22.55■■□□□ 1.2
CPNE1-205ENST00000401607 GJC3Q8NFK1 279 aa22.55■■□□□ 1.2
CPNE1-205ENST00000401607 THRSPQ92748 146 aa22.55■■□□□ 1.2
CPNE1-205ENST00000401607 FBXO17Q96EF6 278 aa22.55■■□□□ 1.2
CPNE1-205ENST00000401607 CALHM2Q9HA72 323 aa22.55■■□□□ 1.2
CPNE1-205ENST00000401607 TCF7L1Q9HCS4 588 aa22.55■■□□□ 1.2
CPNE1-205ENST00000401607 PCDHGA9Q9Y5G4 932 aaKnown RBP22.55■■□□□ 1.2
CPNE1-205ENST00000401607 DNAJC13O75165 2243 aa22.55■■□□□ 1.2
CPNE1-205ENST00000401607 TRAV8-7A0A075B6U6 113 aa22.55■■□□□ 1.2
CPNE1-205ENST00000401607 DLL1O00548 723 aa22.55■■□□□ 1.2
CPNE1-205ENST00000401607 PDCD5O14737 125 aa22.55■■□□□ 1.2
CPNE1-205ENST00000401607 TTRP02766 147 aa22.55■■□□□ 1.2
CPNE1-205ENST00000401607 PDGFAP04085 211 aa22.55■■□□□ 1.2
CPNE1-205ENST00000401607 ACHEP22303 614 aa22.55■■□□□ 1.2
CPNE1-205ENST00000401607 APEX1P27695 318 aaKnown RBP22.55■■□□□ 1.2
CPNE1-205ENST00000401607 ZNF169Q14929 603 aaPredicted RBP22.55■■□□□ 1.2
CPNE1-205ENST00000401607 RNPS1Q15287 305 aaKnown RBP22.55■■□□□ 1.2
CPNE1-205ENST00000401607 TAF13Q15543 124 aa22.55■■□□□ 1.2
CPNE1-205ENST00000401607 CEACAM16Q2WEN9 425 aa22.55■■□□□ 1.2
CPNE1-205ENST00000401607 ZNF704Q6ZNC4 412 aaPredicted RBP22.55■■□□□ 1.2
CPNE1-205ENST00000401607 ASB5Q8WWX0 329 aa22.55■■□□□ 1.2
CPNE1-205ENST00000401607 LINC00470Q9BZP3 86 aa22.55■■□□□ 1.2
CPNE1-205ENST00000401607 PBOV1Q9GZY1 135 aa22.55■■□□□ 1.2
CPNE1-205ENST00000401607 SLCO5A1Q9H2Y9 848 aa22.55■■□□□ 1.2
CPNE1-205ENST00000401607 ARPC4-TTLL3A0A0A6YYG9 625 aa22.54■■□□□ 1.2
CPNE1-205ENST00000401607 LOC107986453A0A1B0GWG9 222 aa22.54■■□□□ 1.2
CPNE1-205ENST00000401607 ADRA2CP18825 462 aa22.54■■□□□ 1.2
CPNE1-205ENST00000401607 PRKXP51817 358 aa22.54■■□□□ 1.2
CPNE1-205ENST00000401607 CCDC92Q53HC0 331 aaPredicted RBP22.54■■□□□ 1.2
CPNE1-205ENST00000401607 ASPHD2Q6ICH7 369 aa22.54■■□□□ 1.2
CPNE1-205ENST00000401607 ELMOD2Q8IZ81 293 aa22.54■■□□□ 1.2
CPNE1-205ENST00000401607 DHDHQ9UQ10 334 aa22.54■■□□□ 1.2
CPNE1-205ENST00000401607 MSRB2Q9Y3D2 182 aa22.54■■□□□ 1.2
CPNE1-205ENST00000401607 DCHS1Q96JQ0 3298 aa22.53■■□□□ 1.2
CPNE1-205ENST00000401607 PAHP00439 452 aa22.53■■□□□ 1.2
CPNE1-205ENST00000401607 UBCP0CG48 685 aaKnown RBP22.53■■□□□ 1.2
CPNE1-205ENST00000401607 CNIH2Q6PI25 160 aa22.53■■□□□ 1.2
CPNE1-205ENST00000401607 FOXB1Q99853 325 aa22.53■■□□□ 1.2
CPNE1-205ENST00000401607 PRDM14Q9GZV8 571 aa22.53■■□□□ 1.2
CPNE1-205ENST00000401607 SLITRK2Q9H156 845 aa22.53■■□□□ 1.2
CPNE1-205ENST00000401607 ABCB10Q9NRK6 738 aa22.53■■□□□ 1.2
CPNE1-205ENST00000401607 SLC7A10Q9NS82 523 aa22.53■■□□□ 1.2
CPNE1-205ENST00000401607 PARPBPQ9NWS1 579 aa22.53■■□□□ 1.2
CPNE1-205ENST00000401607 NUFIP1Q9UHK0 495 aaKnown RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms