RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 PSMB1P20618 241 aaKnown RBP12.6□□□□□ -0.39
SCAF4-202ENST00000399804 ERP29P30040 261 aaKnown RBP12.6□□□□□ -0.39
SCAF4-202ENST00000399804 WDR38Q5JTN6 314 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 OR5H6Q8NGV6 325 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 JAM3Q9BX67 310 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 GPR84Q9NQS5 396 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 GSKIPQ9P0R6 139 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 ALG5Q9Y673 324 aa12.6□□□□□ -0.39
SCAF4-202ENST00000399804 ZNF587BE7ETH6 402 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 LIPCP11150 499 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 HERV-K104P61576 105 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 DOC2BQ14184 412 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 METTL11BQ5VVY1 283 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 OR10K2Q6IF99 312 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 IL17RDQ8NFM7 739 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 OR5H2Q8NGV7 314 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 OR52I2Q8NH67 350 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 ALKBH3Q96Q83 286 aaPredicted RBP12.59□□□□□ -0.39
SCAF4-202ENST00000399804 TMEM59Q9BXS4 323 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 FANCFQ9NPI8 374 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 GLTPQ9NZD2 209 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 WRBO00258 174 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 TO15178 435 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 RBMXL2O75526 392 aaKnown RBP12.59□□□□□ -0.39
SCAF4-202ENST00000399804 TCRBP04435 133 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 FGF5P12034 268 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 PTBP1P26599 531 aaKnown RBP eCLIP12.59□□□□□ -0.397e-6■□□□□ 8.1
SCAF4-202ENST00000399804 PPIAP62937 165 aaKnown RBP12.59□□□□□ -0.39
SCAF4-202ENST00000399804 ASAH1Q13510 395 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 GPR176Q14439 515 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 ISXQ2M1V0 245 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 DMKNQ6E0U4 476 aaPredicted RBP12.59□□□□□ -0.39
SCAF4-202ENST00000399804 MOB3CQ70IA8 216 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 BEST3Q8N1M1 668 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 TGIF2Q9GZN2 237 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 RANGRFQ9HD47 186 aaPredicted RBP12.59□□□□□ -0.39
SCAF4-202ENST00000399804 PLEKHB1Q9UF11 243 aaPredicted RBP12.59□□□□□ -0.39
SCAF4-202ENST00000399804 BGLAPP02818 100 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 HLA-DOBP13765 273 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 CDK2P24941 298 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 NOVA1P51513 510 aaKnown RBP12.59□□□□□ -0.39
SCAF4-202ENST00000399804 CFHR1Q03591 330 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 OR1C1Q15619 314 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 DND1Q8IYX4 353 aaKnown RBP12.59□□□□□ -0.39
SCAF4-202ENST00000399804 ASCC1Q8N9N2 400 aaKnown RBP12.59□□□□□ -0.39
SCAF4-202ENST00000399804 NOXO1Q8NFA2 376 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 KCNE4Q8WWG9 221 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 PIGTQ969N2 578 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 C4orf45Q96LM5 186 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 NKX3-1Q99801 234 aaPredicted RBP12.59□□□□□ -0.39
SCAF4-202ENST00000399804 BARHL1Q9BZE3 327 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 OR2B2Q9GZK3 357 aa12.59□□□□□ -0.39
SCAF4-202ENST00000399804 RANBP3Q9H6Z4 567 aaPredicted RBP12.59□□□□□ -0.39
SCAF4-202ENST00000399804 MRM2Q9UI43 246 aaKnown RBP12.59□□□□□ -0.39
SCAF4-202ENST00000399804 LSM2Q9Y333 95 aaKnown RBP12.59□□□□□ -0.39
SCAF4-202ENST00000399804 GDF9O60383 454 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 ABHD16AO95870 558 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 DBHP09172 617 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 THBS2P35442 1172 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 ARL6IP1Q15041 203 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 PLCXD3Q63HM9 321 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 NKAIN3Q8N8D7 197 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 OR56B4Q8NH76 319 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 M1APQ8TC57 530 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 APH1AQ96BI3 265 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 GUCD1Q96NT3 240 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 SPSB2Q99619 263 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 CCDC86Q9H6F5 360 aaKnown RBP12.58□□□□□ -0.4
SCAF4-202ENST00000399804 HSPB2A8KAH6 182 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 IFNA21P01568 189 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 CALCBP10092 127 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 GALP22466 123 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 HSPB2Q16082 182 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 INO80EQ8NBZ0 244 aaPredicted RBP12.58□□□□□ -0.4
SCAF4-202ENST00000399804 OR2V1Q8NHB1 315 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 THAP6Q8TBB0 222 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 GCDHQ92947 438 aaPredicted RBP12.58□□□□□ -0.4
SCAF4-202ENST00000399804 PBOV1Q9GZY1 135 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 SIRT4Q9Y6E7 314 aaPredicted RBP12.58□□□□□ -0.4
SCAF4-202ENST00000399804 LIPT2A6NK58 231 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 M0R135 149 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 MSL3P1P0C860 447 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 TAS2R19P59542 299 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 CNN3Q15417 329 aaKnown RBP12.58□□□□□ -0.4
SCAF4-202ENST00000399804 SPINK14Q6IE38 97 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 BPIFB2Q8N4F0 458 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 ZNF565Q8N9K5 539 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 DVL3Q92997 716 aaPredicted RBP12.58□□□□□ -0.4
SCAF4-202ENST00000399804 ZNF799Q96GE5 643 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 PAPOLGQ9BWT3 736 aaKnown RBP12.58□□□□□ -0.4
SCAF4-202ENST00000399804 ZFP64Q9NPA5 681 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 PCDHGA5Q9Y5G8 931 aa12.58□□□□□ -0.4
SCAF4-202ENST00000399804 GUSBP08236 651 aa12.57□□□□□ -0.4
SCAF4-202ENST00000399804 SP9P0CG40 484 aa12.57□□□□□ -0.4
SCAF4-202ENST00000399804 IL32P24001 234 aa12.57□□□□□ -0.4
SCAF4-202ENST00000399804 Q6ZTK2 550 aa12.57□□□□□ -0.4
SCAF4-202ENST00000399804 CDH24Q86UP0 819 aa12.57□□□□□ -0.4
SCAF4-202ENST00000399804 KCNG3Q8TAE7 436 aa12.57□□□□□ -0.4
SCAF4-202ENST00000399804 CYSLTR2Q9NS75 346 aa12.57□□□□□ -0.4
SCAF4-202ENST00000399804 THADAQ6YHU6 1953 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms