RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 SOCS6O14544 535 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 ZNF195O14628 629 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 HOXD3P31249 432 aaPredicted RBP7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 WDR4P57081 412 aaKnown RBP7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 CXCR4P61073 352 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 RPS21P63220 83 aaKnown RBP7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 OR8G1Q15617 311 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 PCED1BQ96HM7 432 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 PRR14LQ5THK1 2151 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 PRICKLE3O43900 615 aaPredicted RBP7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 C21orf33P30042 268 aaPredicted RBP7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 KIR2DS2P43631 304 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 RRN3P1Q2M238 152 aa7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 CDCA2Q69YH5 1023 aaPredicted RBP7.93□□□□□ -1.14
CACNA1C-220ENST00000399655 ERVK-7P63135 1459 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 KBTBD11-OT1A0A1B0GTJ5 212 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 XCR1P46094 333 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 KMT5CQ86Y97 462 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 OR4B1Q8NGF8 309 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 DDX31Q9H8H2 851 aaKnown RBP7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 SLC5A10A0PJK1 596 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 MC5RP33032 325 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 RRADP55042 308 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 DNLZQ5SXM8 178 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 CSNK1A1LQ8N752 337 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 IGDCC4Q8TDY8 1250 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 TMEM56Q96MV1 263 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 STYXL1Q9Y6J8 313 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 GPR18Q14330 331 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 AGERQ15109 404 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 CPZQ66K79 652 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 WBP2NLQ6ICG8 309 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 SCCPDHQ8NBX0 429 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 TFAP2CQ92754 450 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 KTI12Q96EK9 354 aaPredicted RBP7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 INIPQ9NRY2 104 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 UPK3BL1B0FP48 263 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 UPK3BL2E5RIL1 263 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 CLDN34H7C241 214 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 PPP1R17O96001 155 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 GBAP04062 536 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 SP1P08047 785 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 TAF10Q12962 218 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 LYG2Q86SG7 212 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 RTL8AQ9BWD3 113 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 A2ML1A8K2U0 1454 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 CDS2O95674 445 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 LIPAP38571 399 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 OPRL1P41146 370 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 OR1E2P47887 323 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 RNPS1Q15287 305 aaKnown RBP7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 IGFBP7Q16270 282 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 ZBTB37Q5TC79 503 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 SDR9C7Q8NEX9 313 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 RPEQ96AT9 228 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 SEPSECSQ9HD40 501 aaKnown RBP7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 FLRT3Q9NZU0 649 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 PIGLQ9Y2B2 252 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 PPP1R3DO95685 299 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 FBLN1P23142 703 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 NTSR1P30989 418 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 Q5PR19 223 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 BHLHA15Q7RTS1 189 aaPredicted RBP7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 SLC36A1Q7Z2H8 476 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 SFTPA2Q8IWL1 248 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 SFTPA1Q8IWL2 248 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 C5orf17Q8NAS9 161 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 H7C2G1 150 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 FAM157CP0CG43 387 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 GDF10P55107 478 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 ZNF273Q14593 569 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 GRAMD2AQ8IUY3 354 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 C17orf78Q8N4C9 275 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 SLC7A6Q92536 515 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 VN1R3Q9BXE9 311 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 TXLNGYQ9BZA5 131 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 FBXL12Q9NXK8 326 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 IRS1P35568 1242 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 MEF2CQ06413 473 aaPredicted RBP7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 TMEM267Q0VDI3 215 aaPredicted RBP7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 S100A7L2Q5SY68 101 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 OR51S1Q8NGJ8 323 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 OR4C13Q8NGP0 309 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 SLC35B4Q969S0 331 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 RELTQ969Z4 430 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 SERINC2Q96SA4 455 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 DPH2Q9BQC3 489 aaPredicted RBP7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 SPATC1LQ9H0A9 340 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 CSAG2Q9Y5P2 127 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 NBASA2RRP1 2371 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 A0A0B4J293 547 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 RAD52P43351 418 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 OR1L4Q8NGR5 311 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 ZDHHC16Q969W1 377 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 TREM2Q9NZC2 230 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 ZNF93P35789 620 aaPredicted RBP7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 MMP26Q9NRE1 261 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 ACACAQ13085 2346 aa7.92□□□□□ -1.14
CACNA1C-220ENST00000399655 FZD6O60353 706 aa7.91□□□□□ -1.14
CACNA1C-220ENST00000399655 HNRNPA1P09651 372 aaKnown RBP eCLIP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms