RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 HRH4Q9H3N8 390 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 UQCC1Q9NVA1 299 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 STK17BO94768 372 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 PSMB6P28072 239 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 SERPINF1P36955 418 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 AKIRIN2Q53H80 203 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 FAM219AQ8IW50 185 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 C16orf52Q8NHV5 167 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 RNF141Q8WVD5 230 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 ROBO4Q8WZ75 1007 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 RRNAD1Q96FB5 475 aaKnown RBP12.57□□□□□ -0.4
APOB-202ENST00000399256 NUDT9Q9BW91 350 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 PRMT8Q9NR22 394 aaPredicted RBP12.57□□□□□ -0.4
APOB-202ENST00000399256 ARPC4-TTLL3A0A0A6YYG9 625 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 LINC00587B1AMM8 73 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 ACAA1P09110 424 aaPredicted RBP12.56□□□□□ -0.4
APOB-202ENST00000399256 PNMTP11086 282 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 CBR1P16152 277 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 TACR3P29371 465 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 GJA4P35212 333 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 PPICP45877 212 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 SLC16A13Q7RTY0 426 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 SFTPA2Q8IWL1 248 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 PAQR4Q8N4S7 273 aaPredicted RBP12.56□□□□□ -0.4
APOB-202ENST00000399256 CHST4Q8NCG5 386 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 NUDCD2Q8WVJ2 157 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 TAAR8Q969N4 342 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.56□□□□□ -0.4
APOB-202ENST00000399256 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.56□□□□□ -0.4
APOB-202ENST00000399256 WIPF3A6NGB9 483 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 PHYHO14832 338 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 LMX1BO60663 402 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 OR6A2O95222 327 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 IL2RAP01589 272 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 CD2P06729 351 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 CRHP06850 196 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 HLA-GP17693 338 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 PTGFRP43088 359 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 SNRPEP62304 92 aaKnown RBP12.56□□□□□ -0.4
APOB-202ENST00000399256 BTG2P78543 158 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 MEF2DQ14814 521 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 ALG11Q2TAA5 492 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 GFOD2Q3B7J2 385 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 ZNF679Q8IYX0 411 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 ZSCAN1Q8NBB4 408 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 STOML3Q8TAV4 291 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 BAHD1Q8TBE0 780 aaPredicted RBP12.56□□□□□ -0.4
APOB-202ENST00000399256 RNF128Q8TEB7 428 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 ASB16Q96NS5 453 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 ZNF587Q96SQ5 575 aaPredicted RBP12.56□□□□□ -0.4
APOB-202ENST00000399256 MMP26Q9NRE1 261 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 TMEM100Q9NV29 134 aa12.56□□□□□ -0.4
APOB-202ENST00000399256 DHCR7Q9UBM7 475 aaKnown RBP12.56□□□□□ -0.4
APOB-202ENST00000399256 A0A0A6YYC8 382 aaPredicted RBP12.55□□□□□ -0.4
APOB-202ENST00000399256 F8VVB4 439 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 F8VWA3 439 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 I3L1I5 382 aaPredicted RBP12.55□□□□□ -0.4
APOB-202ENST00000399256 HPGDP15428 266 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 ABOP16442 354 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 GDI1P31150 447 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 HRH1P35367 487 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 DNASE1L1P49184 302 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 RBM39Q14498 530 aaKnown RBP12.55□□□□□ -0.4
APOB-202ENST00000399256 PGAP1Q75T13 922 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 OR4D6Q8NGJ1 314 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 OR13C3Q8NGS6 347 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 THRSPQ92748 146 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 FAM46BQ96A09 425 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 SCARF2Q96GP6 870 aaPredicted RBP12.55□□□□□ -0.4
APOB-202ENST00000399256 SEC11CQ9BY50 192 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 OR2S2Q9NQN1 319 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 FANCMQ8IYD8 2048 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 EPOPA6NHQ4 379 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 K7EQS6 105 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 NR0B1P51843 470 aaKnown RBP12.55□□□□□ -0.4
APOB-202ENST00000399256 MST1LQ2TV78 715 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 EMC4Q5J8M3 183 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 FDX2Q6P4F2 183 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 TAF8Q7Z7C8 310 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 MARCH3Q86UD3 253 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 TMEM200AQ86VY9 491 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 ZSCAN4Q8NAM6 433 aaPredicted RBP12.55□□□□□ -0.4
APOB-202ENST00000399256 SLC30A7Q8NEW0 376 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 DMBX1Q8NFW5 382 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 ZNF563Q8TA94 476 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 ZC3H10Q96K80 434 aaKnown RBP12.55□□□□□ -0.4
APOB-202ENST00000399256 CYTL1Q9NRR1 136 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 TEX13DA0A0J9YY54 714 aaPredicted RBP12.55□□□□□ -0.4
APOB-202ENST00000399256 XKRYO14609 159 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 SGCEO43556 437 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 SLC16A7O60669 478 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 IFNA4P05014 189 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 MUC1P15941 1255 aaPredicted RBP12.55□□□□□ -0.4
APOB-202ENST00000399256 IGFBP3P17936 291 aaPredicted RBP12.55□□□□□ -0.4
APOB-202ENST00000399256 IGSF11Q5DX21 431 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 C1QL3Q5VWW1 255 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 SLC18B1Q6NT16 456 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 RBMS3Q6XE24 437 aaKnown RBP12.55□□□□□ -0.4
APOB-202ENST00000399256 RTN4RL2Q86UN3 420 aa12.55□□□□□ -0.4
APOB-202ENST00000399256 BHLHE23Q8NDY6 225 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms