RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 HSD17B8Q92506 261 aa17.1■□□□□ 0.33
PDLIM2-205ENST00000397761 FBXO17Q96EF6 278 aa17.1■□□□□ 0.33
PDLIM2-205ENST00000397761 TRMT61AQ96FX7 289 aaKnown RBP17.1■□□□□ 0.33
PDLIM2-205ENST00000397761 CHCHD6Q9BRQ6 235 aa17.1■□□□□ 0.33
PDLIM2-205ENST00000397761 CENPOQ9BU64 300 aa17.1■□□□□ 0.33
PDLIM2-205ENST00000397761 TP63Q9H3D4 680 aaPredicted RBP17.1■□□□□ 0.33
PDLIM2-205ENST00000397761 C12orf49Q9H741 205 aa17.1■□□□□ 0.33
PDLIM2-205ENST00000397761 POLEQ07864 2286 aa17.1■□□□□ 0.33
PDLIM2-205ENST00000397761 SMG1Q96Q15 3661 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 TRBV2A0A0J9YWF9 115 aa17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 RER1O15258 196 aa17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 SC5DO75845 299 aa17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 TNFSF13O75888 250 aa17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 HLA-DPB1P04440 258 aa17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 CTSSP25774 331 aa17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 GDI2P50395 445 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 FOXG1P55316 489 aaPredicted RBP17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 VBP1P61758 197 aa17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 FABP5Q01469 135 aa17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 NFATC3Q12968 1075 aa17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 ALKBH1Q13686 389 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 SPCS2Q15005 226 aa17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 SOWAHCQ53LP3 525 aaPredicted RBP17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 OR7E24Q6IFN5 339 aa17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 PCSK4Q6UW60 755 aa17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 GFRALQ6UXV0 394 aa17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 ZNF813Q6ZN06 617 aa17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 MS4A15Q8N5U1 240 aa17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 OR2G2Q8NGZ5 317 aa17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 GHSRQ92847 366 aa17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 NIPAL2Q9H841 368 aa17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 PLSCR4Q9NRQ2 329 aa17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 PTTG2Q9NZH5 202 aa17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 FRRS1LQ9P0K9 344 aa17.09■□□□□ 0.33
PDLIM2-205ENST00000397761 OR4C45A6NMZ5 311 aa17.08■□□□□ 0.32
PDLIM2-205ENST00000397761 PRRG2O14669 202 aa17.08■□□□□ 0.32
PDLIM2-205ENST00000397761 RPP14O95059 124 aaKnown RBP17.08■□□□□ 0.32
PDLIM2-205ENST00000397761 PNPP00491 289 aa17.08■□□□□ 0.32
PDLIM2-205ENST00000397761 PCSK6P29122 969 aa17.08■□□□□ 0.32
PDLIM2-205ENST00000397761 MPGP29372 298 aa17.08■□□□□ 0.32
PDLIM2-205ENST00000397761 CEACAM8P31997 349 aaPredicted RBP17.08■□□□□ 0.32
PDLIM2-205ENST00000397761 MMP16P51512 607 aa17.08■□□□□ 0.32
PDLIM2-205ENST00000397761 LSM3P62310 102 aaKnown RBP17.08■□□□□ 0.32
PDLIM2-205ENST00000397761 FAPQ12884 760 aa17.08■□□□□ 0.32
PDLIM2-205ENST00000397761 FOXF2Q12947 444 aa17.08■□□□□ 0.32
PDLIM2-205ENST00000397761 SPATC1Q76KD6 591 aa17.08■□□□□ 0.32
PDLIM2-205ENST00000397761 DOLPP1Q86YN1 238 aa17.08■□□□□ 0.32
PDLIM2-205ENST00000397761 LRRC18Q8N456 261 aa17.08■□□□□ 0.32
PDLIM2-205ENST00000397761 TMEM203Q969S6 136 aa17.08■□□□□ 0.32
PDLIM2-205ENST00000397761 WBP1Q96G27 269 aa17.08■□□□□ 0.32
PDLIM2-205ENST00000397761 C4orf45Q96LM5 186 aa17.08■□□□□ 0.32
PDLIM2-205ENST00000397761 SH3GL3Q99963 347 aa17.08■□□□□ 0.32
PDLIM2-205ENST00000397761 TXNL4BQ9NX01 149 aaKnown RBP17.08■□□□□ 0.32
PDLIM2-205ENST00000397761 SSR3Q9UNL2 185 aa17.08■□□□□ 0.32
PDLIM2-205ENST00000397761 R4GMQ9 66 aa17.08■□□□□ 0.32
PDLIM2-205ENST00000397761 LOC100506127A0A0U1RQW1 187 aa17.07■□□□□ 0.32
PDLIM2-205ENST00000397761 A0A1W2PPW3 197 aa17.07■□□□□ 0.32
PDLIM2-205ENST00000397761 ZFPL1O95159 310 aa17.07■□□□□ 0.32
PDLIM2-205ENST00000397761 CGAP01215 116 aa17.07■□□□□ 0.32
PDLIM2-205ENST00000397761 ITGA5P08648 1049 aa17.07■□□□□ 0.32
PDLIM2-205ENST00000397761 MMP7P09237 267 aaPredicted RBP17.07■□□□□ 0.32
PDLIM2-205ENST00000397761 H2BFMP0C1H6 154 aa17.07■□□□□ 0.32
PDLIM2-205ENST00000397761 UGT2B10P36537 528 aa17.07■□□□□ 0.32
PDLIM2-205ENST00000397761 RPS11P62280 158 aaKnown RBP eCLIP17.07■□□□□ 0.32
PDLIM2-205ENST00000397761 SLC3A1Q07837 685 aa17.07■□□□□ 0.32
PDLIM2-205ENST00000397761 CCDC92Q53HC0 331 aaPredicted RBP17.07■□□□□ 0.32
PDLIM2-205ENST00000397761 KLHL24Q6TFL4 600 aa17.07■□□□□ 0.32
PDLIM2-205ENST00000397761 TMEM91Q6ZNR0 172 aa17.07■□□□□ 0.32
PDLIM2-205ENST00000397761 CATSPERDQ86XM0 798 aa17.07■□□□□ 0.32
PDLIM2-205ENST00000397761 SKA3Q8IX90 412 aa17.07■□□□□ 0.32
PDLIM2-205ENST00000397761 UBE2J2Q8N2K1 259 aa17.07■□□□□ 0.32
PDLIM2-205ENST00000397761 PRSS35Q8N3Z0 413 aa17.07■□□□□ 0.32
PDLIM2-205ENST00000397761 IL17RDQ8NFM7 739 aa17.07■□□□□ 0.32
PDLIM2-205ENST00000397761 DCLRE1CQ96SD1 692 aaKnown RBP17.07■□□□□ 0.32
PDLIM2-205ENST00000397761 TMED9Q9BVK6 235 aa17.07■□□□□ 0.32
PDLIM2-205ENST00000397761 CENPMQ9NSP4 180 aa17.07■□□□□ 0.32
PDLIM2-205ENST00000397761 ZNF224Q9NZL3 707 aa17.07■□□□□ 0.32
PDLIM2-205ENST00000397761 FBXL3Q9UKT7 428 aa17.07■□□□□ 0.32
PDLIM2-205ENST00000397761 GABRPO00591 440 aa17.06■□□□□ 0.32
PDLIM2-205ENST00000397761 SLC19A2O60779 497 aa17.06■□□□□ 0.32
PDLIM2-205ENST00000397761 FARS2O95363 451 aaKnown RBP17.06■□□□□ 0.32
PDLIM2-205ENST00000397761 IL18BPO95998 194 aa17.06■□□□□ 0.32
PDLIM2-205ENST00000397761 OTX1P32242 354 aaPredicted RBP17.06■□□□□ 0.32
PDLIM2-205ENST00000397761 KIR3DL2P43630 455 aa17.06■□□□□ 0.32
PDLIM2-205ENST00000397761 PCBD1P61457 104 aa17.06■□□□□ 0.32
PDLIM2-205ENST00000397761 GRB2P62993 217 aaKnown RBP17.06■□□□□ 0.32
PDLIM2-205ENST00000397761 MFGE8Q08431 387 aaPredicted RBP17.06■□□□□ 0.32
PDLIM2-205ENST00000397761 SCRN3Q0VDG4 424 aa17.06■□□□□ 0.32
PDLIM2-205ENST00000397761 VWA1Q6PCB0 445 aa17.06■□□□□ 0.32
PDLIM2-205ENST00000397761 Q6ZT83 130 aa17.06■□□□□ 0.32
PDLIM2-205ENST00000397761 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.06■□□□□ 0.32
PDLIM2-205ENST00000397761 RPRMLQ8N4K4 120 aa17.06■□□□□ 0.32
PDLIM2-205ENST00000397761 CNEP1R1Q8N9A8 125 aa17.06■□□□□ 0.32
PDLIM2-205ENST00000397761 STARD4Q96DR4 205 aa17.06■□□□□ 0.32
PDLIM2-205ENST00000397761 BOD1Q96IK1 185 aa17.06■□□□□ 0.32
PDLIM2-205ENST00000397761 PDCD1LG2Q9BQ51 273 aa17.06■□□□□ 0.32
PDLIM2-205ENST00000397761 TMEM212A6NML5 194 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 RGS9O75916 674 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 IL2RAP01589 272 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 TMIGD3P0DMS9 266 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms