RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 HOXC8P31273 242 aa13.72□□□□□ -0.21
CHL1-202ENST00000397491 TMEM64Q6YI46 380 aa13.72□□□□□ -0.21
CHL1-202ENST00000397491 GTF2H5Q6ZYL4 71 aa13.72□□□□□ -0.21
CHL1-202ENST00000397491 C12orf76Q8N812 135 aaPredicted RBP13.72□□□□□ -0.21
CHL1-202ENST00000397491 OR2G2Q8NGZ5 317 aa13.72□□□□□ -0.21
CHL1-202ENST00000397491 SLC6A18Q96N87 628 aa13.72□□□□□ -0.21
CHL1-202ENST00000397491 XRCC2O43543 280 aa13.72□□□□□ -0.21
CHL1-202ENST00000397491 DVL1P1P54792 670 aaPredicted RBP13.72□□□□□ -0.21
CHL1-202ENST00000397491 BIDP55957 195 aa13.72□□□□□ -0.21
CHL1-202ENST00000397491 ZNF684Q5T5D7 378 aa13.72□□□□□ -0.21
CHL1-202ENST00000397491 TOMM20LQ6UXN7 152 aa13.72□□□□□ -0.21
CHL1-202ENST00000397491 LHX4Q969G2 390 aa13.72□□□□□ -0.21
CHL1-202ENST00000397491 CMBLQ96DG6 245 aa13.72□□□□□ -0.21
CHL1-202ENST00000397491 CDH20Q9HBT6 801 aa13.72□□□□□ -0.21
CHL1-202ENST00000397491 COA3Q9Y2R0 106 aaPredicted RBP13.72□□□□□ -0.21
CHL1-202ENST00000397491 SSSCA1O60232 199 aa13.71□□□□□ -0.21
CHL1-202ENST00000397491 ZNF429Q86V71 674 aa13.71□□□□□ -0.21
CHL1-202ENST00000397491 GCNT2Q8N0V5 402 aa13.71□□□□□ -0.21
CHL1-202ENST00000397491 ZNF485Q8NCK3 441 aa13.71□□□□□ -0.21
CHL1-202ENST00000397491 EMG1Q92979 244 aaKnown RBP13.71□□□□□ -0.21
CHL1-202ENST00000397491 ARSGQ96EG1 525 aa13.71□□□□□ -0.21
CHL1-202ENST00000397491 FCMRO60667 390 aa13.71□□□□□ -0.21
CHL1-202ENST00000397491 RAB5AP20339 215 aa13.71□□□□□ -0.21
CHL1-202ENST00000397491 RPS27P42677 84 aaKnown RBP13.71□□□□□ -0.21
CHL1-202ENST00000397491 EEF1A1P68104 462 aaKnown RBP13.71□□□□□ -0.21
CHL1-202ENST00000397491 CSNK1G2P78368 415 aa13.71□□□□□ -0.21
CHL1-202ENST00000397491 VAMP8Q9BV40 100 aa13.71□□□□□ -0.21
CHL1-202ENST00000397491 ZNF865P0CJ78 1059 aaPredicted RBP13.71□□□□□ -0.21
CHL1-202ENST00000397491 ARHGAP11BQ3KRB8 267 aa13.71□□□□□ -0.21
CHL1-202ENST00000397491 TMEM164Q5U3C3 297 aa13.71□□□□□ -0.21
CHL1-202ENST00000397491 MED25Q71SY5 747 aa13.71□□□□□ -0.21
CHL1-202ENST00000397491 MSRB3Q8IXL7 192 aa13.71□□□□□ -0.21
CHL1-202ENST00000397491 TCEAL8Q8IYN2 117 aa13.71□□□□□ -0.21
CHL1-202ENST00000397491 ZNF596Q8TC21 504 aa13.71□□□□□ -0.21
CHL1-202ENST00000397491 SLC35A4Q96G79 324 aa13.71□□□□□ -0.21
CHL1-202ENST00000397491 TMEM218A2RU14 115 aa13.71□□□□□ -0.22
CHL1-202ENST00000397491 PTBP3O95758 552 aaKnown RBP13.71□□□□□ -0.22
CHL1-202ENST00000397491 PTGER4P35408 488 aa13.71□□□□□ -0.22
CHL1-202ENST00000397491 APLNRP35414 380 aa13.71□□□□□ -0.22
CHL1-202ENST00000397491 HTR5AP47898 357 aa13.71□□□□□ -0.22
CHL1-202ENST00000397491 GABREP78334 506 aa13.71□□□□□ -0.22
CHL1-202ENST00000397491 FCRL6Q6DN72 434 aa13.71□□□□□ -0.22
CHL1-202ENST00000397491 ZNF66Q6ZN08 573 aa13.71□□□□□ -0.22
CHL1-202ENST00000397491 TIMM29Q9BSF4 260 aa13.71□□□□□ -0.22
CHL1-202ENST00000397491 TINAGL1Q9GZM7 467 aaPredicted RBP13.71□□□□□ -0.22
CHL1-202ENST00000397491 DNAJC25-GNG10A0A024R161 153 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 TMED7-TICAM2A0A0A6YYA0 188 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 ZNF320A2RRD8 509 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 HNRNPA2B1P22626 353 aaKnown RBP13.7□□□□□ -0.22
CHL1-202ENST00000397491 BCL6P41182 706 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 RAB38P57729 211 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 TRILQ7L0X0 811 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 KLHDC1Q8N7A1 406 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 POM121Q96HA1 1249 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 ZNF845Q96IR2 970 aaPredicted RBP13.7□□□□□ -0.22
CHL1-202ENST00000397491 PLAC1Q9HBJ0 212 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 TMED7Q9Y3B3 224 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 HMSDA8MTL9 139 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 GFYI3L273 518 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 MAT1AQ00266 395 aaKnown RBP13.7□□□□□ -0.22
CHL1-202ENST00000397491 ACKR1Q16570 336 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 LGALSLQ3ZCW2 172 aaPredicted RBP13.7□□□□□ -0.22
CHL1-202ENST00000397491 THNSL2Q86YJ6 484 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 COL2A1P02458 1487 aaPredicted RBP13.7□□□□□ -0.22
CHL1-202ENST00000397491 F6UZH7 168 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 RAB27BO00194 218 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 ETHE1O95571 254 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 HNF1AP20823 631 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 MPGP29372 298 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 SSBP1Q04837 148 aaKnown RBP13.7□□□□□ -0.22
CHL1-202ENST00000397491 ELFN2Q5R3F8 820 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 EXD3Q8N9H8 876 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 OR51H1Q8NH63 302 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 OR14A16Q8NHC5 309 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 ABHD1Q96SE0 405 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 SDF2Q99470 211 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 KCNG2Q9UJ96 466 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 ACAD8Q9UKU7 415 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 SCGB2A1O75556 95 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 NTHL1P78549 312 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 ZNF626Q68DY1 528 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 MARCH3Q86UD3 253 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 OR4S1Q8NGB4 309 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 PPP1R35Q8TAP8 253 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 PHYHIPLQ96FC7 376 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 ZDHHC11Q9H8X9 412 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 UCK1Q9HA47 277 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 ARL2-SNX15V9GYD0 113 aa13.7□□□□□ -0.22
CHL1-202ENST00000397491 A0A1W2PPH5 198 aa13.69□□□□□ -0.22
CHL1-202ENST00000397491 J3QR89 54 aa13.69□□□□□ -0.22
CHL1-202ENST00000397491 SPP1P10451 314 aa13.69□□□□□ -0.22
CHL1-202ENST00000397491 TBPP20226 339 aa13.69□□□□□ -0.22
CHL1-202ENST00000397491 TRMT12Q53H54 448 aaKnown RBP13.69□□□□□ -0.22
CHL1-202ENST00000397491 FAM209BQ5JX69 171 aa13.69□□□□□ -0.22
CHL1-202ENST00000397491 SEZ6L2Q6UXD5 910 aa13.69□□□□□ -0.22
CHL1-202ENST00000397491 PLXDC1Q8IUK5 500 aa13.69□□□□□ -0.22
CHL1-202ENST00000397491 TMEM229BQ8NBD8 167 aa13.69□□□□□ -0.22
CHL1-202ENST00000397491 TMEM37Q8WXS4 190 aa13.69□□□□□ -0.22
CHL1-202ENST00000397491 NANOS1Q8WY41 292 aaKnown RBP13.69□□□□□ -0.22
CHL1-202ENST00000397491 MYO5AQ9Y4I1 1855 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms