RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 CD79AP11912 226 aa18.55■□□□□ 0.56
CPNE1-204ENST00000397443 RIDAP52758 137 aaKnown RBP18.55■□□□□ 0.56
CPNE1-204ENST00000397443 HSPB2Q16082 182 aa18.55■□□□□ 0.56
CPNE1-204ENST00000397443 ZNF774Q6NX45 483 aa18.55■□□□□ 0.56
CPNE1-204ENST00000397443 CXorf67Q86X51 503 aaPredicted RBP18.55■□□□□ 0.56
CPNE1-204ENST00000397443 AKR7LQ8NHP1 331 aa18.55■□□□□ 0.56
CPNE1-204ENST00000397443 RND1Q92730 232 aa18.55■□□□□ 0.56
CPNE1-204ENST00000397443 UFD1Q92890 307 aa18.55■□□□□ 0.56
CPNE1-204ENST00000397443 TMEM203Q969S6 136 aa18.55■□□□□ 0.56
CPNE1-204ENST00000397443 MYCBPQ99417 103 aaPredicted RBP18.55■□□□□ 0.56
CPNE1-204ENST00000397443 FUNDC2Q9BWH2 189 aa18.55■□□□□ 0.56
CPNE1-204ENST00000397443 BRD7Q9NPI1 651 aa18.55■□□□□ 0.56
CPNE1-204ENST00000397443 ZNF503-AS2A6NEH8 195 aa18.54■□□□□ 0.56
CPNE1-204ENST00000397443 CD8BP10966 210 aa18.54■□□□□ 0.56
CPNE1-204ENST00000397443 OPRM1P35372 400 aa18.54■□□□□ 0.56
CPNE1-204ENST00000397443 TGFBR2P37173 567 aa18.54■□□□□ 0.56
CPNE1-204ENST00000397443 OPRL1P41146 370 aa18.54■□□□□ 0.56
CPNE1-204ENST00000397443 SH3BGRP55822 239 aaPredicted RBP18.54■□□□□ 0.56
CPNE1-204ENST00000397443 GALK2Q01415 458 aa18.54■□□□□ 0.56
CPNE1-204ENST00000397443 TGFBR3Q03167 851 aa18.54■□□□□ 0.56
CPNE1-204ENST00000397443 ROM1Q03395 351 aa18.54■□□□□ 0.56
CPNE1-204ENST00000397443 SLC3A1Q07837 685 aa18.54■□□□□ 0.56
CPNE1-204ENST00000397443 STK11Q15831 433 aa18.54■□□□□ 0.56
CPNE1-204ENST00000397443 IGFBP7Q16270 282 aa18.54■□□□□ 0.56
CPNE1-204ENST00000397443 CCDC92Q53HC0 331 aaPredicted RBP18.54■□□□□ 0.56
CPNE1-204ENST00000397443 ANKRD16Q6P6B7 361 aa18.54■□□□□ 0.56
CPNE1-204ENST00000397443 ZNF474Q6S9Z5 364 aaPredicted RBP18.54■□□□□ 0.56
CPNE1-204ENST00000397443 FJX1Q86VR8 437 aa18.54■□□□□ 0.56
CPNE1-204ENST00000397443 GABRG1Q8N1C3 465 aa18.54■□□□□ 0.56
CPNE1-204ENST00000397443 SLC7A6Q92536 515 aa18.54■□□□□ 0.56
CPNE1-204ENST00000397443 DMRTA2Q96SC8 542 aa18.54■□□□□ 0.56
CPNE1-204ENST00000397443 PNRC2Q9NPJ4 139 aaKnown RBP18.54■□□□□ 0.56
CPNE1-204ENST00000397443 ZNF224Q9NZL3 707 aa18.54■□□□□ 0.56
CPNE1-204ENST00000397443 N6AMT1Q9Y5N5 214 aa18.54■□□□□ 0.56
CPNE1-204ENST00000397443 DIDO1Q9BTC0 2240 aaKnown RBP18.54■□□□□ 0.56
CPNE1-204ENST00000397443 A6NHS1 94 aa18.53■□□□□ 0.56
CPNE1-204ENST00000397443 ZNF878C9JN71 531 aa18.53■□□□□ 0.56
CPNE1-204ENST00000397443 CCRL2O00421 344 aa18.53■□□□□ 0.56
CPNE1-204ENST00000397443 SGCEO43556 437 aa18.53■□□□□ 0.56
CPNE1-204ENST00000397443 ODF4Q2M2E3 257 aa18.53■□□□□ 0.56
CPNE1-204ENST00000397443 FOXB2Q5VYV0 432 aa18.53■□□□□ 0.56
CPNE1-204ENST00000397443 KCTD20Q7Z5Y7 419 aa18.53■□□□□ 0.56
CPNE1-204ENST00000397443 LIX1LQ8IVB5 337 aa18.53■□□□□ 0.56
CPNE1-204ENST00000397443 PHC2Q8IXK0 858 aa18.53■□□□□ 0.56
CPNE1-204ENST00000397443 ZNF433Q8N7K0 673 aaPredicted RBP18.53■□□□□ 0.56
CPNE1-204ENST00000397443 BCL2L2Q92843 193 aaPredicted RBP18.53■□□□□ 0.56
CPNE1-204ENST00000397443 DOK2O60496 412 aa18.53■□□□□ 0.56
CPNE1-204ENST00000397443 CNOT4O95628 575 aaKnown RBP18.53■□□□□ 0.56
CPNE1-204ENST00000397443 HSD11B1P28845 292 aa18.53■□□□□ 0.56
CPNE1-204ENST00000397443 PRKXP51817 358 aa18.53■□□□□ 0.56
CPNE1-204ENST00000397443 NANOS3P60323 173 aaKnown RBP18.53■□□□□ 0.56
CPNE1-204ENST00000397443 PSG4Q00888 419 aa18.53■□□□□ 0.56
CPNE1-204ENST00000397443 TLE1Q04724 770 aa18.53■□□□□ 0.56
CPNE1-204ENST00000397443 TBRG1Q3YBR2 411 aa18.53■□□□□ 0.56
CPNE1-204ENST00000397443 NRN1LQ496H8 165 aa18.53■□□□□ 0.56
CPNE1-204ENST00000397443 TMEM211Q6ICI0 200 aa18.53■□□□□ 0.56
CPNE1-204ENST00000397443 BEND4Q6ZU67 534 aa18.53■□□□□ 0.56
CPNE1-204ENST00000397443 ZNF627Q7L945 461 aa18.53■□□□□ 0.56
CPNE1-204ENST00000397443 YIPF6Q96EC8 236 aa18.53■□□□□ 0.56
CPNE1-204ENST00000397443 TMED9Q9BVK6 235 aa18.53■□□□□ 0.56
CPNE1-204ENST00000397443 GALNT8Q9NY28 637 aa18.53■□□□□ 0.56
CPNE1-204ENST00000397443 TIMM10BQ9Y5J6 103 aa18.53■□□□□ 0.56
CPNE1-204ENST00000397443 CPEP16870 476 aa18.52■□□□□ 0.56
CPNE1-204ENST00000397443 PCBD1P61457 104 aa18.52■□□□□ 0.56
CPNE1-204ENST00000397443 LSM3P62310 102 aaKnown RBP18.52■□□□□ 0.56
CPNE1-204ENST00000397443 MFGE8Q08431 387 aaPredicted RBP18.52■□□□□ 0.56
CPNE1-204ENST00000397443 SCRN3Q0VDG4 424 aa18.52■□□□□ 0.56
CPNE1-204ENST00000397443 SLC36A2Q495M3 483 aa18.52■□□□□ 0.56
CPNE1-204ENST00000397443 PRR7Q8TB68 274 aa18.52■□□□□ 0.56
CPNE1-204ENST00000397443 ATF6BQ99941 703 aa18.52■□□□□ 0.56
CPNE1-204ENST00000397443 OR2H1Q9GZK4 316 aa18.52■□□□□ 0.56
CPNE1-204ENST00000397443 NOX3Q9HBY0 568 aa18.52■□□□□ 0.56
CPNE1-204ENST00000397443 ZNF629Q9UEG4 869 aaPredicted RBP18.52■□□□□ 0.56
CPNE1-204ENST00000397443 ST6GALNAC2Q9UJ37 374 aa18.52■□□□□ 0.56
CPNE1-204ENST00000397443 CEPT1Q9Y6K0 416 aa18.52■□□□□ 0.56
CPNE1-204ENST00000397443 TRBV2A0A0J9YWF9 115 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 F5H5K5 113 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 H3BSH0 61 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 MMP7P09237 267 aaPredicted RBP18.51■□□□□ 0.55
CPNE1-204ENST00000397443 GADD45AP24522 165 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 TTKP33981 857 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 UQCRFS1P47985 274 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 RPS25P62851 125 aaKnown RBP18.51■□□□□ 0.55
CPNE1-204ENST00000397443 ACSM1Q08AH1 577 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 PABPC1L2AQ5JQF8 200 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 ELFN2Q5R3F8 820 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 RPL3LQ92901 407 aaKnown RBP18.51■□□□□ 0.55
CPNE1-204ENST00000397443 PPP1R14AQ96A00 147 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 RNF166Q96A37 237 aaPredicted RBP18.51■□□□□ 0.55
CPNE1-204ENST00000397443 WNT5BQ9H1J7 359 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 ISYNA1Q9NPH2 558 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 PRR14LQ5THK1 2151 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 DVL2O14641 736 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 PNPP00491 289 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 DBHP09172 617 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 SLC2A1P11166 492 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 COX5AP20674 150 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 TAS2R43P59537 309 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 HIST1H3AP68431 136 aa18.51■□□□□ 0.55
CPNE1-204ENST00000397443 TPBGQ13641 420 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms