RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 ATPIF1Q9UII2 106 aa11.11□□□□□ -0.63
LMCD1-202ENST00000397386 LRP12Q9Y561 859 aa11.11□□□□□ -0.63
LMCD1-202ENST00000397386 SHANK1Q9Y566 2161 aa11.11□□□□□ -0.63
LMCD1-202ENST00000397386 CACNA1CQ13936 2221 aa11.11□□□□□ -0.63
LMCD1-202ENST00000397386 INTS1Q8N201 2190 aaKnown RBP11.11□□□□□ -0.63
LMCD1-202ENST00000397386 MAGEB4O15481 346 aaPredicted RBP11.1□□□□□ -0.63
LMCD1-202ENST00000397386 H2BFMP0C1H6 154 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 GALP22466 123 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 GABRA5P31644 462 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 CA7P43166 264 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 MMP16P51512 607 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 CCR9P51686 369 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 FOXG1P55316 489 aaPredicted RBP11.1□□□□□ -0.63
LMCD1-202ENST00000397386 GRB2P62993 217 aaKnown RBP11.1□□□□□ -0.63
LMCD1-202ENST00000397386 PMPCAQ10713 525 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 CDK5R1Q15078 307 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 RAB35Q15286 201 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 TRAM1Q15629 374 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 ELFN2Q5R3F8 820 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 C1QTNF12Q5T7M4 302 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 GPR107Q5VW38 600 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 LIPKQ5VXJ0 399 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 OR7E24Q6IFN5 339 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 ZNF544Q6NX49 715 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 KLHL24Q6TFL4 600 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 C3P1Q6ZMU1 363 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 GDPGP1Q6ZNW5 385 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 CLVS1Q8IUQ0 354 aaPredicted RBP11.1□□□□□ -0.63
LMCD1-202ENST00000397386 SKA3Q8IX90 412 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 MS4A15Q8N5U1 240 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 OR1K1Q8NGR3 316 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 HTRA1Q92743 480 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 BCL2L2Q92843 193 aaPredicted RBP11.1□□□□□ -0.63
LMCD1-202ENST00000397386 RNF166Q96A37 237 aaPredicted RBP11.1□□□□□ -0.63
LMCD1-202ENST00000397386 SMIM19Q96E16 107 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 DMRTA2Q96SC8 542 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 SH3GL3Q99963 347 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 ST6GALNAC2Q9UJ37 374 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 ENPP5Q9UJA9 477 aa11.1□□□□□ -0.63
LMCD1-202ENST00000397386 ARPC4-TTLL3A0A0A6YYG9 625 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 E9PI62 339 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 PSMD9O00233 223 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 MSTNO14793 375 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 SGCEO43556 437 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 GPRIN2O60269 458 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 GABARAPO95166 117 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 APOC1P02654 83 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 MMP7P09237 267 aaPredicted RBP11.09□□□□□ -0.63
LMCD1-202ENST00000397386 IGHV1-2P23083 117 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 OTX1P32242 354 aaPredicted RBP11.09□□□□□ -0.63
LMCD1-202ENST00000397386 ARR3P36575 388 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 GTF2A1P52655 376 aaPredicted RBP11.09□□□□□ -0.63
LMCD1-202ENST00000397386 ZNF829Q3KNS6 432 aaPredicted RBP11.09□□□□□ -0.63
LMCD1-202ENST00000397386 CD200R1LQ6Q8B3 271 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 SLC16A12Q6ZSM3 486 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 ZNF433Q8N7K0 673 aaPredicted RBP11.09□□□□□ -0.63
LMCD1-202ENST00000397386 NANOS1Q8WY41 292 aaKnown RBP11.09□□□□□ -0.63
LMCD1-202ENST00000397386 ATF6BQ99941 703 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 CENPMQ9NSP4 180 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 GALNT8Q9NY28 637 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 PLEK2Q9NYT0 353 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 RSL24D1Q9UHA3 163 aaKnown RBP11.09□□□□□ -0.63
LMCD1-202ENST00000397386 MEMO1Q9Y316 297 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 SF3B6Q9Y3B4 125 aaKnown RBP11.09□□□□□ -0.63
LMCD1-202ENST00000397386 SIRT4Q9Y6E7 314 aaPredicted RBP11.09□□□□□ -0.63
LMCD1-202ENST00000397386 CACNA1BQ00975 2339 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 A0A0G2JNJ9 132 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 TRBV2A0A0J9YWF9 115 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 SYNGR3O43761 229 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 NOL3O60936 208 aaKnown RBP11.09□□□□□ -0.63
LMCD1-202ENST00000397386 SRSF10O75494 262 aaKnown RBP11.09□□□□□ -0.63
LMCD1-202ENST00000397386 UBL3O95164 117 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 WNT11O96014 354 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 HLA-DPB1P04440 258 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 ZNF32P17041 273 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 ALKBH1Q13686 389 aaKnown RBP11.09□□□□□ -0.63
LMCD1-202ENST00000397386 CCDC92Q53HC0 331 aaPredicted RBP11.09□□□□□ -0.63
LMCD1-202ENST00000397386 FOXB2Q5VYV0 432 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 MRGPRGQ86SM5 289 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 ALDH16A1Q8IZ83 802 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 C17orf78Q8N4C9 275 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 ZNF610Q8N9Z0 462 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 OR2G2Q8NGZ5 317 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 RND1Q92730 232 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 ISOC1Q96CN7 298 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 PGLYRP3Q96LB9 341 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 KCNJ15Q99712 375 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 OR2H1Q9GZK4 316 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 MOB1AQ9H8S9 216 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 ZNF224Q9NZL3 707 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 Q9UFV3 132 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 STUB1Q9UNE7 303 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 GRIP1Q9Y3R0 1128 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 R4GMQ9 66 aa11.09□□□□□ -0.63
LMCD1-202ENST00000397386 TRGV8A0A0C4DH27 118 aa11.08□□□□□ -0.64
LMCD1-202ENST00000397386 OR6C6A6NF89 314 aa11.08□□□□□ -0.64
LMCD1-202ENST00000397386 CCDC160A6NGH7 325 aa11.08□□□□□ -0.64
LMCD1-202ENST00000397386 ACOD1A6NK06 481 aa11.08□□□□□ -0.64
LMCD1-202ENST00000397386 TMEM212A6NML5 194 aa11.08□□□□□ -0.64
LMCD1-202ENST00000397386 AIREO43918 545 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms