RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 TMEM246Q9BRR3 403 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 C16orf95Q9H693 158 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 TIMM10BQ9Y5J6 103 aa7.82□□□□□ -1.16
NEDD9-203ENST00000397378 ZNF816-ZNF321PA0A0X1KG74 233 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 TRAPPC13A5PLN9 417 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 CPSF4LA6NMK7 179 aaKnown RBP7.81□□□□□ -1.16
NEDD9-203ENST00000397378 PHYHO14832 338 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 UBDO15205 165 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 ABHD16AO95870 558 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 IGHV4-59P01825 116 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 TSPAN19P0C672 248 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 COX5BP10606 129 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 GPX2P18283 190 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 LAP3P28838 519 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 PITPNBP48739 271 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 PCBP3P57721 371 aaKnown RBP7.81□□□□□ -1.16
NEDD9-203ENST00000397378 NPTX1Q15818 432 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 DUSP7Q16829 419 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 ZNF181Q2M3W8 571 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 ZNF404Q494X3 552 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 WDR25Q64LD2 544 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-203ENST00000397378 GDPGP1Q6ZNW5 385 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 FOXL2NBQ6ZUU3 175 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 SMYD1Q8NB12 490 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 OR4S1Q8NGB4 309 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 OR6T1Q8NGN1 323 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 FNDC8Q8TC99 324 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 HDAC2Q92769 488 aaKnown RBP7.81□□□□□ -1.16
NEDD9-203ENST00000397378 ITFG2Q969R8 447 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 HAVCR1Q96D42 359 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 CMBLQ96DG6 245 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 B9D2Q9BPU9 175 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 PCDHAC1Q9H158 963 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 POFUT1Q9H488 388 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 MEPEQ9NQ76 525 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-203ENST00000397378 INIPQ9NRY2 104 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 KIF17Q9P2E2 1029 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 CLN8Q9UBY8 286 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 NDRG4Q9ULP0 352 aaKnown RBP7.81□□□□□ -1.16
NEDD9-203ENST00000397378 SLC7A7Q9UM01 511 aa7.81□□□□□ -1.16
NEDD9-203ENST00000397378 TRBV5-3A0A0A0MS03 114 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 P2RY10O00398 339 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 KPNA4O00629 521 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-203ENST00000397378 ENSAO43768 121 aaKnown RBP7.8□□□□□ -1.16
NEDD9-203ENST00000397378 SNNO75324 88 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-203ENST00000397378 ZNF205O95201 554 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 CYB5R3P00387 301 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-203ENST00000397378 IGF2P01344 180 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 VIMP08670 466 aaKnown RBP7.8□□□□□ -1.16
NEDD9-203ENST00000397378 AQP1P29972 269 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 CFHR2P36980 270 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 MRPL19P49406 292 aaKnown RBP7.8□□□□□ -1.16
NEDD9-203ENST00000397378 FMODQ06828 376 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 CD47Q08722 323 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 MPP2Q14168 576 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 DMRTC1Q5HYR2 192 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 ZNF841Q6ZN19 808 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 TSPYL5Q86VY4 417 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-203ENST00000397378 LDLRAD3Q86YD5 345 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 C1orf87Q8N0U7 546 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 LYG1Q8N1E2 194 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 GPR32P1Q8NGA4 272 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 ZNF420Q8TAQ5 688 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-203ENST00000397378 LIPHQ8WWY8 451 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 GATAD2BQ8WXI9 593 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 NSMAFQ92636 917 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 PTP4A1Q93096 173 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 MEGF10Q96KG7 1140 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 COG8Q96MW5 612 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 PRSS27Q9BQR3 290 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 WACQ9BTA9 647 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 ALG12Q9BV10 488 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 CDADC1Q9BWV3 514 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 IKZF5Q9H5V7 419 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 ACOXLQ9NUZ1 547 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 THAP1Q9NVV9 213 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 VAPAQ9P0L0 249 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 SLAMF8Q9P0V8 285 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 CORO2BQ9UQ03 480 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 ANGPT4Q9Y264 503 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 U3KQK5 164 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 DNAH3Q8TD57 4116 aa7.8□□□□□ -1.16
NEDD9-203ENST00000397378 CENPVL3A0A0U1RRI6 287 aa7.79□□□□□ -1.16
NEDD9-203ENST00000397378 LCE6AA0A183 80 aa7.79□□□□□ -1.16
NEDD9-203ENST00000397378 WI2-2373I1.2A0A1W2PRP0 233 aa7.79□□□□□ -1.16
NEDD9-203ENST00000397378 C12orf71A8MTZ7 269 aa7.79□□□□□ -1.16
NEDD9-203ENST00000397378 ZNF879B4DU55 563 aa7.79□□□□□ -1.16
NEDD9-203ENST00000397378 C22orf46C9J442 243 aa7.79□□□□□ -1.16
NEDD9-203ENST00000397378 J3QW42 95 aa7.79□□□□□ -1.16
NEDD9-203ENST00000397378 TSPAN9O75954 239 aa7.79□□□□□ -1.16
NEDD9-203ENST00000397378 OR7A10O76100 309 aa7.79□□□□□ -1.16
NEDD9-203ENST00000397378 MT-ND1P03886 318 aa7.79□□□□□ -1.16
NEDD9-203ENST00000397378 LIPFP07098 398 aa7.79□□□□□ -1.16
NEDD9-203ENST00000397378 KITP10721 976 aa7.79□□□□□ -1.16
NEDD9-203ENST00000397378 MMP9P14780 707 aa7.79□□□□□ -1.16
NEDD9-203ENST00000397378 RAC2P15153 192 aa7.79□□□□□ -1.16
NEDD9-203ENST00000397378 FUT1P19526 365 aa7.79□□□□□ -1.16
NEDD9-203ENST00000397378 MSR1P21757 451 aa7.79□□□□□ -1.16
NEDD9-203ENST00000397378 PSMB10P40306 273 aa7.79□□□□□ -1.16
NEDD9-203ENST00000397378 AQP2P41181 271 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms