RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 TAMM41Q96BW9 452 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 TLCD1Q96CP7 247 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 HAVCR1Q96D42 359 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 MAGEB18Q96M61 343 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 C1orf147Q96MC9 270 aaPredicted RBP7.36□□□□□ -1.23
CAPN3-208ENST00000397204 ZNF48Q96MX3 618 aaPredicted RBP7.36□□□□□ -1.23
CAPN3-208ENST00000397204 EBF4Q9BQW3 602 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 WNT5BQ9H1J7 359 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 TBCCD1Q9NVR7 557 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 RIMS3Q9UJD0 308 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 BAG5Q9UL15 447 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 NDRG4Q9ULP0 352 aaKnown RBP7.36□□□□□ -1.23
CAPN3-208ENST00000397204 PPP1R3CQ9UQK1 317 aa7.36□□□□□ -1.23
CAPN3-208ENST00000397204 IGKV1D-43A0A0B4J1Z2 117 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 C12orf71A8MTZ7 269 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 ANGPT2O15123 496 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 KITLGP21583 273 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 TAS2R41P59536 307 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 BPIFB3P59826 476 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 RPL27P61353 136 aaKnown RBP7.35□□□□□ -1.23
CAPN3-208ENST00000397204 FMODQ06828 376 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 ZMYND11Q15326 602 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 VMACQ2NL98 169 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 ANKDD1AQ495B1 522 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 ALG10Q5BKT4 473 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 ZNF362Q5T0B9 420 aaPredicted RBP7.35□□□□□ -1.23
CAPN3-208ENST00000397204 FAM205BPQ63HN1 556 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 ZNF774Q6NX45 483 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 SLC27A4Q6P1M0 643 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 LEG1Q6P5S2 330 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 RFPL4BQ6ZWI9 263 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 DHDDSQ86SQ9 333 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 MUC20Q8N307 709 aaPredicted RBP7.35□□□□□ -1.23
CAPN3-208ENST00000397204 NPEPL1Q8NDH3 523 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 OR2Z1Q8NG97 314 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 LRRC8CQ8TDW0 803 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 TMEM255BQ8WV15 326 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 TMIGD2Q96BF3 282 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 CMBLQ96DG6 245 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 COG8Q96MW5 612 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 PRDM13Q9H4Q3 707 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 TMBIM4Q9HC24 238 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 C20orf141Q9NUB4 165 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 DCAF16Q9NXF7 216 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 OR5V1Q9UGF6 321 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 LRCH1Q9Y2L9 728 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 SH3GLB1Q9Y371 365 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 MED31Q9Y3C7 131 aa7.35□□□□□ -1.23
CAPN3-208ENST00000397204 PRKDCP78527 4128 aaKnown RBP7.35□□□□□ -1.23
CAPN3-208ENST00000397204 A0A0G2JK05 382 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 A6NIZ1 184 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 TMEM178BH3BS89 294 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 FSTL3O95633 263 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 ABHD16AO95870 558 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 PLATP00750 562 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 IFNA14P01570 189 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 MSR1P21757 451 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 GZMMP51124 257 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 CRYBA2P53672 197 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 MTPNP58546 118 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 RAP1BP61224 184 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 SEC61A1P61619 476 aaKnown RBP7.34□□□□□ -1.23
CAPN3-208ENST00000397204 RAP1AP62834 184 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 PAX2Q02962 417 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 PIN1Q13526 163 aaPredicted RBP7.34□□□□□ -1.23
CAPN3-208ENST00000397204 SELPLGQ14242 412 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 MIDNQ504T8 468 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 BTNL3Q6UXE8 466 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 Q6ZR03 302 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 OR10A6Q8NH74 314 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 PFN4Q8NHR9 129 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 STON2Q8WXE9 905 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 RAB40AQ8WXH6 277 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 UPRTQ96BW1 309 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 THOC1Q96FV9 657 aaKnown RBP7.34□□□□□ -1.23
CAPN3-208ENST00000397204 PLEKHA8Q96JA3 519 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 SIGLEC11Q96RL6 698 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 SH3GL1Q99961 368 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 TMEM165Q9HC07 324 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 MIOXQ9UGB7 285 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 STARD10Q9Y365 291 aa7.34□□□□□ -1.23
CAPN3-208ENST00000397204 KIR2DS1A0A191URI9 304 aa7.33□□□□□ -1.24
CAPN3-208ENST00000397204 CEACAM18A8MTB9 384 aa7.33□□□□□ -1.24
CAPN3-208ENST00000397204 AHCYL1O43865 530 aa7.33□□□□□ -1.24
CAPN3-208ENST00000397204 IGHV4-38-2P0DP08 117 aa7.33□□□□□ -1.24
CAPN3-208ENST00000397204 RAC2P15153 192 aa7.33□□□□□ -1.24
CAPN3-208ENST00000397204 MDKP21741 143 aaPredicted RBP7.33□□□□□ -1.24
CAPN3-208ENST00000397204 IFNA8P32881 189 aa7.33□□□□□ -1.24
CAPN3-208ENST00000397204 CTXN1P60606 82 aa7.33□□□□□ -1.24
CAPN3-208ENST00000397204 SCRN3Q0VDG4 424 aa7.33□□□□□ -1.24
CAPN3-208ENST00000397204 ST3GAL3Q11203 375 aa7.33□□□□□ -1.24
CAPN3-208ENST00000397204 NFYCQ13952 458 aa7.33□□□□□ -1.24
CAPN3-208ENST00000397204 CYLC2Q14093 348 aaPredicted RBP7.33□□□□□ -1.24
CAPN3-208ENST00000397204 ENDOGQ14249 297 aaKnown RBP7.33□□□□□ -1.24
CAPN3-208ENST00000397204 NANOGP8Q6NSW7 305 aa7.33□□□□□ -1.24
CAPN3-208ENST00000397204 PARP8Q8N3A8 854 aa7.33□□□□□ -1.24
CAPN3-208ENST00000397204 ATG16L2Q8NAA4 619 aa7.33□□□□□ -1.24
CAPN3-208ENST00000397204 PCYOX1LQ8NBM8 494 aa7.33□□□□□ -1.24
CAPN3-208ENST00000397204 OR13G1Q8NGZ3 307 aa7.33□□□□□ -1.24
CAPN3-208ENST00000397204 ITLN1Q8WWA0 313 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms