RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 LIN54Q6MZP7 749 aa13.58□□□□□ -0.23
MCF2L-205ENST00000397017 TMEM53Q6P2H8 277 aa13.58□□□□□ -0.23
MCF2L-205ENST00000397017 KCTD9Q7L273 389 aa13.58□□□□□ -0.23
MCF2L-205ENST00000397017 BOLLQ8N9W6 283 aaKnown RBP13.58□□□□□ -0.23
MCF2L-205ENST00000397017 OR8B4Q96RC9 309 aa13.58□□□□□ -0.23
MCF2L-205ENST00000397017 ST6GALNAC5Q9BVH7 336 aa13.58□□□□□ -0.23
MCF2L-205ENST00000397017 TGIF2Q9GZN2 237 aa13.58□□□□□ -0.23
MCF2L-205ENST00000397017 PLEKHB1Q9UF11 243 aaPredicted RBP13.58□□□□□ -0.23
MCF2L-205ENST00000397017 HDGFL3Q9Y3E1 203 aa13.58□□□□□ -0.23
MCF2L-205ENST00000397017 BOLA1Q9Y3E2 137 aa13.58□□□□□ -0.23
MCF2L-205ENST00000397017 PCP4L1A6NKN8 68 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 KLF4O43474 513 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 IGHA1P01876 353 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 DBHP09172 617 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 CFL1P23528 166 aaKnown RBP13.58□□□□□ -0.24
MCF2L-205ENST00000397017 HTR2CP28335 458 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 GDNFP39905 211 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 RRADP55042 308 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 PLAURQ03405 335 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 ZNF584Q8IVC4 421 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 MINDY2Q8NBR6 621 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 FAM3DQ96BQ1 224 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 ZPBPQ9BS86 351 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 GLTPQ9NZD2 209 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 FRRS1LQ9P0K9 344 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 HSPB11Q9Y547 144 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 PIEZO1Q92508 2521 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 CADP27708 2225 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 DHHO43323 396 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 CSF3P09919 207 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 EPXP11678 715 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 THEM4Q5T1C6 240 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 SIAH3Q8IW03 269 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 IL17RDQ8NFM7 739 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 ADAM19Q9H013 955 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 WDR54Q9H977 334 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 EIF3KQ9UBQ5 218 aaKnown RBP13.58□□□□□ -0.24
MCF2L-205ENST00000397017 B3GNT3Q9Y2A9 372 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 CACNG2Q9Y698 323 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 A0A0J9YW62 118 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 OR5H15A6NDH6 313 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 A6NLC8 198 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 ARPC1BO15143 372 aaKnown RBP13.58□□□□□ -0.24
MCF2L-205ENST00000397017 PLPP2O43688 288 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 LCN1P31025 176 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 SUMO3P55854 103 aaPredicted RBP13.58□□□□□ -0.24
MCF2L-205ENST00000397017 ZNF121P58317 390 aaPredicted RBP13.58□□□□□ -0.24
MCF2L-205ENST00000397017 CMTM4Q8IZR5 234 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 ZSCAN1Q8NBB4 408 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 OR2AE1Q8NHA4 323 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 CREB3L1Q96BA8 519 aa13.58□□□□□ -0.24
MCF2L-205ENST00000397017 PPIL3Q9H2H8 161 aaKnown RBP13.58□□□□□ -0.24
MCF2L-205ENST00000397017 FCGR2AP12318 317 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 MSR1P21757 451 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 EVX1P49640 407 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 ANGPTL5Q86XS5 388 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 ZNF454Q8N9F8 522 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 OR51T1Q8NGJ9 327 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 PCDHGA5Q9Y5G8 931 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 MED13LQ71F56 2210 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 A0A0G2JMM0 328 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 A0A1W2PPB8 328 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 A0A1W2PRS3 328 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 IFITM5A6NNB3 132 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 KIR3DP1A8MWS1 328 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 SGCEO43556 437 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 ITGB2P05107 769 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 H2AFB2P0C5Z0 115 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 RFPL3SP0C7P2 107 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 ZNF362Q5T0B9 420 aaPredicted RBP13.57□□□□□ -0.24
MCF2L-205ENST00000397017 SLC43A2Q8N370 569 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 RNASE11Q8TAA1 199 aaKnown RBP13.57□□□□□ -0.24
MCF2L-205ENST00000397017 ADAMTS14Q8WXS8 1223 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 ZBTB8AQ96BR9 441 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 ZNF416Q9BWM5 594 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 RNF32Q9H0A6 362 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 ABRACLQ9P1F3 81 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 KLK11Q9UBX7 282 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 LOC101059948A0A1B0GTJ6 334 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 PIAS4Q8N2W9 510 aaPredicted RBP13.57□□□□□ -0.24
MCF2L-205ENST00000397017 FAM71CQ8NEG0 241 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 GJC3Q8NFK1 279 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 OR52I2Q8NH67 350 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 PPP1R14BQ96C90 147 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 CPNE5Q9HCH3 593 aa13.57□□□□□ -0.24
MCF2L-205ENST00000397017 REV3LO60673 3130 aa13.56□□□□□ -0.24
MCF2L-205ENST00000397017 C13orf42A0A1B0GVH6 325 aa13.56□□□□□ -0.24
MCF2L-205ENST00000397017 MFGE8Q08431 387 aaPredicted RBP13.56□□□□□ -0.24
MCF2L-205ENST00000397017 VHLLQ6RSH7 139 aa13.56□□□□□ -0.24
MCF2L-205ENST00000397017 PPP1R32Q7Z5V6 425 aa13.56□□□□□ -0.24
MCF2L-205ENST00000397017 TMEM178AQ8NBL3 297 aa13.56□□□□□ -0.24
MCF2L-205ENST00000397017 OR2V1Q8NHB1 315 aa13.56□□□□□ -0.24
MCF2L-205ENST00000397017 ZNF524Q96C55 264 aa13.56□□□□□ -0.24
MCF2L-205ENST00000397017 BORCS8Q96FH0 119 aa13.56□□□□□ -0.24
MCF2L-205ENST00000397017 PRMT8Q9NR22 394 aaPredicted RBP13.56□□□□□ -0.24
MCF2L-205ENST00000397017 SHISA3A0PJX4 238 aa13.56□□□□□ -0.24
MCF2L-205ENST00000397017 SMLR1H3BR10 107 aa13.56□□□□□ -0.24
MCF2L-205ENST00000397017 TO15178 435 aa13.56□□□□□ -0.24
MCF2L-205ENST00000397017 ABHD16AO95870 558 aa13.56□□□□□ -0.24
MCF2L-205ENST00000397017 CDK2P24941 298 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms