RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 BTG2P78543 158 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 DCDP81605 110 aaKnown RBP11.95□□□□□ -0.5
TRIM40-207ENST00000396581 MFGE8Q08431 387 aaPredicted RBP11.95□□□□□ -0.5
TRIM40-207ENST00000396581 KIR2DS5Q14953 304 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 ELOCQ15369 112 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 INPP5JQ15735 1006 aaPredicted RBP11.95□□□□□ -0.5
TRIM40-207ENST00000396581 CCDC157Q569K6 752 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 PAPD4Q6PIY7 484 aaKnown RBP11.95□□□□□ -0.5
TRIM40-207ENST00000396581 NDUFAF7Q7L592 441 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 ZNF627Q7L945 461 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 GATSQ8NAP1 163 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 ZNF519Q8TB69 540 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 PHOSPHO1Q8TCT1 267 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 PRRT1Q99946 306 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 ZNF471Q9BX82 626 aaPredicted RBP11.95□□□□□ -0.5
TRIM40-207ENST00000396581 TAS2R4Q9NYW5 299 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 VSX1Q9NZR4 365 aaPredicted RBP11.95□□□□□ -0.5
TRIM40-207ENST00000396581 CKLFQ9UBR5 152 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 NOP16Q9Y3C1 178 aaKnown RBP11.95□□□□□ -0.5
TRIM40-207ENST00000396581 FANCMQ8IYD8 2048 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 IGLV1-36A0A0B4J1U3 117 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 DISC1C4P0D8 188 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 CLDN4O14493 209 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 CD2P06729 351 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 CELA2BP08218 269 aaPredicted RBP11.95□□□□□ -0.5
TRIM40-207ENST00000396581 ST6GAL1P15907 406 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 CD38P28907 300 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 BDKRB2P30411 391 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 ATP1B3P54709 279 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 MICBQ29980 383 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 CORO6Q6QEF8 472 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 ABCA7Q8IZY2 2146 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 SVBPQ8N300 66 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 OR1S2Q8NGQ3 325 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 PPP1R14AQ96A00 147 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 LAT2Q9GZY6 243 aa11.95□□□□□ -0.5
TRIM40-207ENST00000396581 TRBV6-7A0A0A0MS04 114 aa11.94□□□□□ -0.5
TRIM40-207ENST00000396581 C9orf170A2RU37 121 aa11.94□□□□□ -0.5
TRIM40-207ENST00000396581 PRSS37A4D1T9 235 aa11.94□□□□□ -0.5
TRIM40-207ENST00000396581 WIPF3A6NGB9 483 aa11.94□□□□□ -0.5
TRIM40-207ENST00000396581 ISG15P05161 165 aa11.94□□□□□ -0.5
TRIM40-207ENST00000396581 CTSEP14091 401 aa11.94□□□□□ -0.5
TRIM40-207ENST00000396581 ADCYAP1P18509 176 aa11.94□□□□□ -0.5
TRIM40-207ENST00000396581 MAOBP27338 520 aa11.94□□□□□ -0.5
TRIM40-207ENST00000396581 CAPZA1P52907 286 aa11.94□□□□□ -0.5
TRIM40-207ENST00000396581 HSD17B7P56937 341 aa11.94□□□□□ -0.5
TRIM40-207ENST00000396581 SKP1P63208 163 aa11.94□□□□□ -0.5
TRIM40-207ENST00000396581 TAF13Q15543 124 aa11.94□□□□□ -0.5
TRIM40-207ENST00000396581 DEFB110Q30KQ9 67 aa11.94□□□□□ -0.5
TRIM40-207ENST00000396581 MOGAT2Q3SYC2 334 aa11.94□□□□□ -0.5
TRIM40-207ENST00000396581 ZNF260Q3ZCT1 412 aa11.94□□□□□ -0.5
TRIM40-207ENST00000396581 KCTD18Q6PI47 426 aaPredicted RBP11.94□□□□□ -0.5
TRIM40-207ENST00000396581 SLC35D2Q76EJ3 337 aa11.94□□□□□ -0.5
TRIM40-207ENST00000396581 PUSL1Q8N0Z8 303 aaKnown RBP11.94□□□□□ -0.5
TRIM40-207ENST00000396581 KLHDC3Q9BQ90 382 aa11.94□□□□□ -0.5
TRIM40-207ENST00000396581 PDCD10Q9BUL8 212 aa11.94□□□□□ -0.5
TRIM40-207ENST00000396581 GMEB2Q9UKD1 530 aa11.94□□□□□ -0.5
TRIM40-207ENST00000396581 CARHSP1Q9Y2V2 147 aaKnown RBP11.94□□□□□ -0.5
TRIM40-207ENST00000396581 SIT1Q9Y3P8 196 aa11.94□□□□□ -0.5
TRIM40-207ENST00000396581 USP34Q70CQ2 3546 aa11.94□□□□□ -0.5
TRIM40-207ENST00000396581 CACNA1IQ9P0X4 2223 aa11.94□□□□□ -0.5
TRIM40-207ENST00000396581 CPED1A4D0V7 1026 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 DBX1A6NMT0 343 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 NUDT19A8MXV4 375 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 H7C2Y5 167 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 SCDO00767 359 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 NSA2O95478 260 aaKnown RBP11.93□□□□□ -0.5
TRIM40-207ENST00000396581 CD79AP11912 226 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 RORAP35398 523 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 SLC6A8P48029 635 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 CXCL12P48061 93 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 ARRB1P49407 418 aaPredicted RBP11.93□□□□□ -0.5
TRIM40-207ENST00000396581 CCR4P51679 360 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 ARHGDIBP52566 201 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 RPL27P61353 136 aaKnown RBP11.93□□□□□ -0.5
TRIM40-207ENST00000396581 INSM1Q01101 510 aaPredicted RBP11.93□□□□□ -0.5
TRIM40-207ENST00000396581 NAAAQ02083 359 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 PPP1R1AQ13522 171 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 PNLIPRP3Q17RR3 467 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 DHRS7BQ6IAN0 325 aaPredicted RBP11.93□□□□□ -0.5
TRIM40-207ENST00000396581 RAB12Q6IQ22 244 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 OOSP2Q86WS3 158 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 LDLRAD3Q86YD5 345 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 ZNF584Q8IVC4 421 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 DEFB119Q8N690 84 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 OR5AP2Q8NGF4 316 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 PIK3IP1Q96FE7 263 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 SLC25A44Q96H78 314 aaPredicted RBP11.93□□□□□ -0.5
TRIM40-207ENST00000396581 ELF4Q99607 663 aaPredicted RBP11.93□□□□□ -0.5
TRIM40-207ENST00000396581 NKX3-1Q99801 234 aaPredicted RBP11.93□□□□□ -0.5
TRIM40-207ENST00000396581 LRRC61Q9BV99 259 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 PTDSS2Q9BVG9 487 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 NUDT9Q9BW91 350 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 CST11Q9H112 138 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 MPDZO75970 2070 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 TRAV36DV7A0A075B6V5 113 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 K7ESF4 209 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 EIF1AYO14602 144 aaKnown RBP11.93□□□□□ -0.5
TRIM40-207ENST00000396581 XKRYO14609 159 aa11.93□□□□□ -0.5
TRIM40-207ENST00000396581 CCSO14618 274 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms