RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 MRGPRX4Q96LA9 322 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 MACROD1Q9BQ69 325 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 NUDT9Q9BW91 350 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 TPSD1Q9BZJ3 242 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 OR52D1Q9H346 318 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 EGLN3Q9H6Z9 239 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 ISG20L2Q9H9L3 353 aaKnown RBP4.81□□□□□ -1.64
VPS41-203ENST00000395969 ADGRL4Q9HBW9 690 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 NOX3Q9HBY0 568 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 GPN1Q9HCN4 374 aaPredicted RBP4.81□□□□□ -1.64
VPS41-203ENST00000395969 SDHAF3Q9NRP4 125 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 RXFP3Q9NSD7 469 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 ZFP57Q9NU63 452 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 TRAV36DV7A0A075B6V5 113 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 IGHV1-45A0A0A0MS14 117 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 GLOD5A6NK44 160 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 DISC1C4P0D8 188 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 WRBO00258 174 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 PEX12O00623 359 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 GPRIN2O60269 458 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 OR10H2O60403 315 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 SPDEFO95238 335 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 EDN3P14138 238 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 PAX6P26367 422 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 NOS3P29474 1203 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 POLR2HP52434 150 aaKnown RBP4.81□□□□□ -1.64
VPS41-203ENST00000395969 LSM11P83369 360 aaKnown RBP eCLIP4.81□□□□□ -1.64
VPS41-203ENST00000395969 PCOLCEQ15113 449 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 MPPED2Q15777 294 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 DEFB133Q30KQ1 61 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 KRTAP27-1Q3LI81 207 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 FAM27D1Q5T7N8 215 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 OR7E24Q6IFN5 339 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 LRRN1Q6UXK5 716 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 SSX6Q7RTT6 188 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 PRSS45Q7RTY3 260 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 SLC36A1Q7Z2H8 476 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 STX12Q86Y82 276 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 DEFB123Q8N688 67 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 TMEM105Q8N8V8 129 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 CCDC54Q8NEL0 328 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 ZCCHC10Q8TBK6 192 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 RXFP4Q8TDU9 374 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 MEGF10Q96KG7 1140 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 ZFP3Q96NJ6 502 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 TGM7Q96PF1 710 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 TSNAXQ99598 290 aaKnown RBP4.81□□□□□ -1.64
VPS41-203ENST00000395969 PAPOLGQ9BWT3 736 aaKnown RBP4.81□□□□□ -1.64
VPS41-203ENST00000395969 ANGPTL4Q9BY76 406 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 EGLN1Q9GZT9 426 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 FGF21Q9NSA1 209 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 RCE1Q9Y256 329 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 ATG2BQ96BY7 2078 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 ANKRD20A5PA0PJZ0 165 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 C21orf140B9A014 251 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 E9PI62 339 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 LAMTOR5O43504 91 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 ALOX12BO75342 701 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 SH3BGRLO75368 114 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 SRSF10O75494 262 aaKnown RBP4.81□□□□□ -1.64
VPS41-203ENST00000395969 NDUFB6O95139 128 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 SPTBP11277 2137 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 ATF1P18846 271 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 CTSSP25774 331 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 SDHAP31040 664 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 P2RY4P51582 365 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 RNF4P78317 190 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 BTG2P78543 158 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 CCL7P80098 99 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 PLA2G7Q13093 441 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 CBFBQ13951 182 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 CRMP1Q14194 572 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 HABP2Q14520 560 aaPredicted RBP4.81□□□□□ -1.64
VPS41-203ENST00000395969 C2orf68Q2NKX9 166 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 LINC01559Q495D7 138 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 NRN1LQ496H8 165 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 C4orf48Q5BLP8 95 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 DEGS2Q6QHC5 323 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 KIRREL2Q6UWL6 708 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 CDK20Q8IZL9 346 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 SIRT6Q8N6T7 355 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 PHOSPHO1Q8TCT1 267 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 SLC25A43Q8WUT9 341 aaPredicted RBP4.81□□□□□ -1.64
VPS41-203ENST00000395969 RLN3Q8WXF3 142 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 SLC25A28Q96A46 364 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 ZBTB8AQ96BR9 441 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 PHYHIPLQ96FC7 376 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 CCDC74BQ96LY2 380 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 PRRX2Q99811 253 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 GPR87Q9BY21 358 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 FBXO34Q9NWN3 711 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 ST6GALNAC2Q9UJ37 374 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 SLC13A4Q9UKG4 626 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 FXYD6-FXYD2A0A087WZ82 144 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 ZNF729A6NN14 1252 aaPredicted RBP4.8□□□□□ -1.64
VPS41-203ENST00000395969 GABARAPH6UMI1 98 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 KHDRBS3O75525 346 aaKnown RBP4.8□□□□□ -1.64
VPS41-203ENST00000395969 KLF7O75840 302 aaPredicted RBP4.8□□□□□ -1.64
VPS41-203ENST00000395969 NUDT14O95848 222 aa4.8□□□□□ -1.64
VPS41-203ENST00000395969 ABHD16AO95870 558 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms