RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 CRYBB2P43320 205 aa17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 SH3BGRP55822 239 aaPredicted RBP17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 NANOS3P60323 173 aaKnown RBP17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 VBP1P61758 197 aa17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 HIST1H3AP68431 136 aa17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 HIST2H3PS2Q5TEC6 136 aa17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 HIST2H3AQ71DI3 136 aa17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 BTLAQ7Z6A9 289 aa17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 GHSRQ92847 366 aa17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 PGLYRP3Q96LB9 341 aa17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 PLSCR4Q9NRQ2 329 aa17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 FBXL3Q9UKT7 428 aa17.91■□□□□ 0.46
VCPKMT-202ENST00000395860 A0A096LPE4 126 aa17.9■□□□□ 0.46
VCPKMT-202ENST00000395860 A0A1W2PPZ6 126 aa17.9■□□□□ 0.46
VCPKMT-202ENST00000395860 ATE1O95260 518 aa17.9■□□□□ 0.46
VCPKMT-202ENST00000395860 CNOT4O95628 575 aaKnown RBP17.9■□□□□ 0.46
VCPKMT-202ENST00000395860 HLA-DPB1P04440 258 aa17.9■□□□□ 0.46
VCPKMT-202ENST00000395860 ITGA5P08648 1049 aa17.9■□□□□ 0.46
VCPKMT-202ENST00000395860 GLI4P10075 376 aa17.9■□□□□ 0.46
VCPKMT-202ENST00000395860 HSD11B1P28845 292 aa17.9■□□□□ 0.46
VCPKMT-202ENST00000395860 PCBD1P61457 104 aa17.9■□□□□ 0.46
VCPKMT-202ENST00000395860 NCS1P62166 190 aa17.9■□□□□ 0.46
VCPKMT-202ENST00000395860 SCRN3Q0VDG4 424 aa17.9■□□□□ 0.46
VCPKMT-202ENST00000395860 TRAM1Q15629 374 aa17.9■□□□□ 0.46
VCPKMT-202ENST00000395860 ZNF544Q6NX49 715 aa17.9■□□□□ 0.46
VCPKMT-202ENST00000395860 GDPGP1Q6ZNW5 385 aa17.9■□□□□ 0.46
VCPKMT-202ENST00000395860 SYT9Q86SS6 491 aa17.9■□□□□ 0.46
VCPKMT-202ENST00000395860 NAXEQ8NCW5 288 aa17.9■□□□□ 0.46
VCPKMT-202ENST00000395860 WACQ9BTA9 647 aa17.9■□□□□ 0.46
VCPKMT-202ENST00000395860 CENPOQ9BU64 300 aa17.9■□□□□ 0.46
VCPKMT-202ENST00000395860 PLEK2Q9NYT0 353 aa17.9■□□□□ 0.46
VCPKMT-202ENST00000395860 FRRS1LQ9P0K9 344 aa17.9■□□□□ 0.46
VCPKMT-202ENST00000395860 SH3BGRL2Q9UJC5 107 aa17.9■□□□□ 0.46
VCPKMT-202ENST00000395860 GTF2A1LQ9UNN4 478 aa17.9■□□□□ 0.46
VCPKMT-202ENST00000395860 SLC5A6Q9Y289 635 aa17.9■□□□□ 0.46
VCPKMT-202ENST00000395860 SLC22A1O15245 554 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 CD1AP06126 327 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 ZNF32P17041 273 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 CEACAM8P31997 349 aaPredicted RBP17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 FABP5Q01469 135 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 CCDC92Q53HC0 331 aaPredicted RBP17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 SOWAHCQ53LP3 525 aaPredicted RBP17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 ELFN2Q5R3F8 820 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 FDX2Q6P4F2 183 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 Q6ZT83 130 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 OR1K1Q8NGR3 316 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 OR2G2Q8NGZ5 317 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 RPS4Y2Q8TD47 263 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 STARD4Q96DR4 205 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 WBP1Q96G27 269 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 ATF6BQ99941 703 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 PDCD1LG2Q9BQ51 273 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 TIMM10BQ9Y5J6 103 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 R4GMQ9 66 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 INTS1Q8N201 2190 aaKnown RBP17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 SGCEO43556 437 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 IL18BPO95998 194 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 PATE4P0C8F1 98 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 DCTDP32321 178 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 GRB2P62993 217 aaKnown RBP17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 ZNF829Q3KNS6 432 aaPredicted RBP17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 SLC36A2Q495M3 483 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 ANKRD16Q6P6B7 361 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 MS4A15Q8N5U1 240 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 HDHD5Q9BXW7 423 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 NIPAL2Q9H841 368 aa17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 DDX28Q9NUL7 540 aaKnown RBP17.89■□□□□ 0.45
VCPKMT-202ENST00000395860 TMEM269A0A1B0GVZ9 245 aa17.88■□□□□ 0.45
VCPKMT-202ENST00000395860 TRDV1A0A1B0GX56 115 aa17.88■□□□□ 0.45
VCPKMT-202ENST00000395860 LOC110117498-PIK3R3F6TDL0 507 aa17.88■□□□□ 0.45
VCPKMT-202ENST00000395860 PNPP00491 289 aa17.88■□□□□ 0.45
VCPKMT-202ENST00000395860 IGHV1-2P23083 117 aa17.88■□□□□ 0.45
VCPKMT-202ENST00000395860 TGFBR1P36897 503 aa17.88■□□□□ 0.45
VCPKMT-202ENST00000395860 MFGE8Q08431 387 aaPredicted RBP17.88■□□□□ 0.45
VCPKMT-202ENST00000395860 SPCS2Q15005 226 aa17.88■□□□□ 0.45
VCPKMT-202ENST00000395860 RAB35Q15286 201 aa17.88■□□□□ 0.45
VCPKMT-202ENST00000395860 CD200R1LQ6Q8B3 271 aa17.88■□□□□ 0.45
VCPKMT-202ENST00000395860 PRSS35Q8N3Z0 413 aa17.88■□□□□ 0.45
VCPKMT-202ENST00000395860 ST6GALNAC3Q8NDV1 305 aa17.88■□□□□ 0.45
VCPKMT-202ENST00000395860 OR5AK2Q8NH90 309 aa17.88■□□□□ 0.45
VCPKMT-202ENST00000395860 FGFBP3Q8TAT2 258 aa17.88■□□□□ 0.45
VCPKMT-202ENST00000395860 TRMT61AQ96FX7 289 aaKnown RBP17.88■□□□□ 0.45
VCPKMT-202ENST00000395860 RNF167Q9H6Y7 350 aa17.88■□□□□ 0.45
VCPKMT-202ENST00000395860 RNF121Q9H920 327 aa17.88■□□□□ 0.45
VCPKMT-202ENST00000395860 TLN1Q9Y490 2541 aaKnown RBP17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 A0A1W2PPW3 197 aa17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 GABRPO00591 440 aa17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 GPRIN2O60269 458 aa17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 DOK2O60496 412 aa17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 SRSF10O75494 262 aaKnown RBP17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 RGS9O75916 674 aaPredicted RBP17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 ZFPL1O95159 310 aa17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 CGAP01215 116 aa17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 CD8BP10966 210 aa17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 CTSSP25774 331 aa17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 CCR9P51686 369 aa17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 TGFBR3Q03167 851 aa17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 PMPCAQ10713 525 aa17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 NFATC3Q12968 1075 aa17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 WDR38Q5JTN6 314 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms