RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 CREBBPQ92793 2442 aa17.15■□□□□ 0.34
SNCA-203ENST00000394986 NDUFS7O75251 213 aa17.14■□□□□ 0.33
SNCA-203ENST00000394986 GLCEO94923 617 aa17.14■□□□□ 0.33
SNCA-203ENST00000394986 LCKP06239 509 aa17.14■□□□□ 0.33
SNCA-203ENST00000394986 GLRXP35754 106 aa17.14■□□□□ 0.33
SNCA-203ENST00000394986 UCP2P55851 309 aa17.14■□□□□ 0.33
SNCA-203ENST00000394986 TESK1Q15569 626 aa17.14■□□□□ 0.33
SNCA-203ENST00000394986 SWI5Q1ZZU3 235 aa17.14■□□□□ 0.33
SNCA-203ENST00000394986 ELFN2Q5R3F8 820 aa17.14■□□□□ 0.33
SNCA-203ENST00000394986 LRP11Q86VZ4 500 aa17.14■□□□□ 0.33
SNCA-203ENST00000394986 OR2AJ1Q8NGZ0 328 aa17.14■□□□□ 0.33
SNCA-203ENST00000394986 OR1F12Q8NHA8 337 aa17.14■□□□□ 0.33
SNCA-203ENST00000394986 MAP6Q96JE9 813 aa17.14■□□□□ 0.33
SNCA-203ENST00000394986 C9orf16Q9BUW7 83 aa17.14■□□□□ 0.33
SNCA-203ENST00000394986 MRPL37Q9BZE1 423 aaKnown RBP17.14■□□□□ 0.33
SNCA-203ENST00000394986 CXXC4Q9H2H0 198 aa17.14■□□□□ 0.33
SNCA-203ENST00000394986 ZNF701Q9NV72 531 aaPredicted RBP17.14■□□□□ 0.33
SNCA-203ENST00000394986 ENOPH1Q9UHY7 261 aa17.14■□□□□ 0.33
SNCA-203ENST00000394986 CMAHPQ9Y471 501 aa17.14■□□□□ 0.33
SNCA-203ENST00000394986 ZNF593O00488 134 aaPredicted RBP17.13■□□□□ 0.33
SNCA-203ENST00000394986 COX5BP10606 129 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 ANPEPP15144 967 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 GSTT1P30711 240 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 ENTPD1P49961 510 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 RPS7P62081 194 aaKnown RBP17.13■□□□□ 0.33
SNCA-203ENST00000394986 SPATA46Q5T0L3 261 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 ERI1Q8IV48 349 aaKnown RBP17.13■□□□□ 0.33
SNCA-203ENST00000394986 TCEANCQ8N8B7 351 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 OR6N2Q8NGY6 317 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 ABHD4Q8TB40 342 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 PITX2Q99697 317 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 SYT3Q9BQG1 590 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 GSX2Q9BZM3 304 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 PNRC2Q9NPJ4 139 aaKnown RBP17.13■□□□□ 0.33
SNCA-203ENST00000394986 MYEF2Q9P2K5 600 aaKnown RBP17.13■□□□□ 0.33
SNCA-203ENST00000394986 KCNG2Q9UJ96 466 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 TMEM129A0AVI4 362 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 TLX2O43763 284 aaPredicted RBP17.13■□□□□ 0.33
SNCA-203ENST00000394986 NGFP01138 241 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 SLC2A5P22732 501 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 PCSK6P29122 969 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 RPS23P62266 143 aaKnown RBP17.13■□□□□ 0.33
SNCA-203ENST00000394986 APOFQ13790 326 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 EFNB3Q15768 340 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 RGS7BPQ6MZT1 257 aaPredicted RBP17.13■□□□□ 0.33
SNCA-203ENST00000394986 ZBTB49Q6ZSB9 765 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 KRTAP1-3Q8IUG1 177 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 OR10S1Q8NGN2 331 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 OR1J1Q8NGS3 322 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 MRPL24Q96A35 216 aaKnown RBP17.13■□□□□ 0.33
SNCA-203ENST00000394986 EME1Q96AY2 570 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 IL4I1Q96RQ9 567 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 MBOAT4Q96T53 435 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 PRRG3Q9BZD7 231 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 HDHD2Q9H0R4 259 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 PLK3Q9H4B4 646 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 GRIP1Q9Y3R0 1128 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 ORC6Q9Y5N6 252 aa17.13■□□□□ 0.33
SNCA-203ENST00000394986 USF3Q68DE3 2245 aa17.12■□□□□ 0.33
SNCA-203ENST00000394986 B9A039 149 aa17.12■□□□□ 0.33
SNCA-203ENST00000394986 PRODHO43272 600 aa17.12■□□□□ 0.33
SNCA-203ENST00000394986 SELENOFO60613 162 aa17.12■□□□□ 0.33
SNCA-203ENST00000394986 TMCC2O75069 709 aa17.12■□□□□ 0.33
SNCA-203ENST00000394986 ABHD16AO95870 558 aa17.12■□□□□ 0.33
SNCA-203ENST00000394986 CLPTM1O96005 669 aa17.12■□□□□ 0.33
SNCA-203ENST00000394986 RAD52P43351 418 aa17.12■□□□□ 0.33
SNCA-203ENST00000394986 ATP5J2P56134 94 aa17.12■□□□□ 0.33
SNCA-203ENST00000394986 DCXRQ7Z4W1 244 aa17.12■□□□□ 0.33
SNCA-203ENST00000394986 TIGD4Q8IY51 512 aa17.12■□□□□ 0.33
SNCA-203ENST00000394986 TMEM163Q8TC26 289 aa17.12■□□□□ 0.33
SNCA-203ENST00000394986 C4orf45Q96LM5 186 aa17.12■□□□□ 0.33
SNCA-203ENST00000394986 INTS14Q96SY0 518 aa17.12■□□□□ 0.33
SNCA-203ENST00000394986 COQ7Q99807 217 aa17.12■□□□□ 0.33
SNCA-203ENST00000394986 BCL2L14Q9BZR8 327 aa17.12■□□□□ 0.33
SNCA-203ENST00000394986 POFUT1Q9H488 388 aa17.12■□□□□ 0.33
SNCA-203ENST00000394986 TOR3AQ9H497 397 aa17.12■□□□□ 0.33
SNCA-203ENST00000394986 EIF3KQ9UBQ5 218 aaKnown RBP17.12■□□□□ 0.33
SNCA-203ENST00000394986 DUSP13Q9UII6 198 aa17.12■□□□□ 0.33
SNCA-203ENST00000394986 CCDC182A6NF36 153 aa17.11■□□□□ 0.33
SNCA-203ENST00000394986 IGHV4-39P01824 125 aa17.11■□□□□ 0.33
SNCA-203ENST00000394986 PAX1P15863 534 aa17.11■□□□□ 0.33
SNCA-203ENST00000394986 NAA10P41227 235 aaPredicted RBP17.11■□□□□ 0.33
SNCA-203ENST00000394986 BLVRAP53004 296 aa17.11■□□□□ 0.33
SNCA-203ENST00000394986 RAD23AP54725 363 aa17.11■□□□□ 0.33
SNCA-203ENST00000394986 SNRPD2P62316 118 aaKnown RBP17.11■□□□□ 0.33
SNCA-203ENST00000394986 ELF3P78545 371 aaPredicted RBP17.11■□□□□ 0.33
SNCA-203ENST00000394986 EFNB1P98172 346 aa17.11■□□□□ 0.33
SNCA-203ENST00000394986 MAD2L1BPQ15013 274 aaPredicted RBP17.11■□□□□ 0.33
SNCA-203ENST00000394986 TRIP10Q15642 601 aa17.11■□□□□ 0.33
SNCA-203ENST00000394986 PCK2Q16822 640 aa17.11■□□□□ 0.33
SNCA-203ENST00000394986 LRRC36Q1X8D7 754 aa17.11■□□□□ 0.33
SNCA-203ENST00000394986 RSPO1Q2MKA7 263 aaPredicted RBP17.11■□□□□ 0.33
SNCA-203ENST00000394986 Q5PR19 223 aa17.11■□□□□ 0.33
SNCA-203ENST00000394986 SPATC1Q76KD6 591 aa17.11■□□□□ 0.33
SNCA-203ENST00000394986 DPY19L4Q7Z388 723 aa17.11■□□□□ 0.33
SNCA-203ENST00000394986 LRRC75A-AS1Q8N1F1 130 aa17.11■□□□□ 0.33
SNCA-203ENST00000394986 MARCH7Q9H992 704 aa17.11■□□□□ 0.33
SNCA-203ENST00000394986 ATPIF1Q9UII2 106 aa17.11■□□□□ 0.33
SNCA-203ENST00000394986 VSTM5A8MXK1 200 aa17.1■□□□□ 0.33
SNCA-203ENST00000394986 MPV17P39210 176 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms