RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 XKR7Q5GH72 579 aa9.46□□□□□ -0.89
COL4A6-203ENST00000394872 PLXDC2Q6UX71 529 aa9.46□□□□□ -0.89
COL4A6-203ENST00000394872 ZNF573Q86YE8 665 aa9.46□□□□□ -0.89
COL4A6-203ENST00000394872 ZNF439Q8NDP4 499 aa9.46□□□□□ -0.89
COL4A6-203ENST00000394872 ZDHHC16Q969W1 377 aa9.46□□□□□ -0.89
COL4A6-203ENST00000394872 LRRC61Q9BV99 259 aa9.46□□□□□ -0.89
COL4A6-203ENST00000394872 NUDT9Q9BW91 350 aa9.46□□□□□ -0.89
COL4A6-203ENST00000394872 TAS2R5Q9NYW4 299 aa9.46□□□□□ -0.89
COL4A6-203ENST00000394872 FRG2CA6NGY1 282 aa9.46□□□□□ -0.89
COL4A6-203ENST00000394872 TCRBP04435 133 aa9.46□□□□□ -0.89
COL4A6-203ENST00000394872 ZNF385BQ569K4 471 aa9.46□□□□□ -0.89
COL4A6-203ENST00000394872 LAIR1Q6GTX8 287 aa9.46□□□□□ -0.89
COL4A6-203ENST00000394872 FUNDC1Q8IVP5 155 aa9.46□□□□□ -0.89
COL4A6-203ENST00000394872 OR2AE1Q8NHA4 323 aa9.46□□□□□ -0.89
COL4A6-203ENST00000394872 ROBO4Q8WZ75 1007 aa9.46□□□□□ -0.89
COL4A6-203ENST00000394872 OPALINQ96PE5 141 aa9.46□□□□□ -0.89
COL4A6-203ENST00000394872 SPACA1Q9HBV2 294 aa9.46□□□□□ -0.89
COL4A6-203ENST00000394872 TSTD3H0UI37 97 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 PMS2P2O95744 297 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 SCGB1D1O95968 90 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 NRASP01111 189 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 CHRM2P08172 466 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 M6PRP20645 277 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 DND1Q8IYX4 353 aaKnown RBP9.46□□□□□ -0.9
COL4A6-203ENST00000394872 UBAC2Q8NBM4 344 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 OR5M9Q8NGP3 310 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 MRGPRX4Q96LA9 322 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 TECTBQ96PL2 329 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 TINAGL1Q9GZM7 467 aaPredicted RBP9.46□□□□□ -0.9
COL4A6-203ENST00000394872 MEIKINA0A087WXM9 373 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 A0A087WZY1 265 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 ANKRD61A6NGH8 418 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 ATP1B1P05026 303 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 CLEC2LP0C7M8 214 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 APEX1P27695 318 aaKnown RBP9.46□□□□□ -0.9
COL4A6-203ENST00000394872 LAP3P28838 519 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 SLC6A12P48065 614 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 PSMB3P49720 205 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 RPL18Q07020 188 aaKnown RBP9.46□□□□□ -0.9
COL4A6-203ENST00000394872 HTR4Q13639 388 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 HMGN3Q15651 99 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 LIPNQ5VXI9 398 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 FAM199XQ6PEV8 388 aaPredicted RBP9.46□□□□□ -0.9
COL4A6-203ENST00000394872 Q6ZRG5 221 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 ADGRF3Q8IZF5 1079 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 ISL2Q96A47 359 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 TEX101Q9BY14 249 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 SSC5DA1L4H1 1573 aa9.46□□□□□ -0.9
COL4A6-203ENST00000394872 SLC2A10O95528 541 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 SLC35A2P78381 396 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 ZNF718Q3SXZ3 478 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 TMEM81Q6P7N7 255 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 PRSS45Q7RTY3 260 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 ZCCHC4Q9H5U6 513 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 RBFOX1Q9NWB1 397 aaKnown RBP9.45□□□□□ -0.9
COL4A6-203ENST00000394872 CRYABP02511 175 aaKnown RBP9.45□□□□□ -0.9
COL4A6-203ENST00000394872 CTXN2P0C2S0 81 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 SPI1P17947 270 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 GABRG2P18507 467 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 CNR1P21554 472 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 CASP3P42574 277 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 TCTN3Q6NUS6 607 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 ARIH2OSQ8N7S6 290 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 OR51A4Q8NGJ6 313 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 OR6K3Q8NGY3 331 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 KISS1RQ969F8 398 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-203ENST00000394872 MYEOVQ96EZ4 313 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 S1PR5Q9H228 398 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 A0A087WV62 115 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 TXNL1O43396 289 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 XRCC2O43543 280 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 SBK2P0C263 348 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 INSM1Q01101 510 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-203ENST00000394872 CAMKMTQ7Z624 323 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 POMT2Q9UKY4 750 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 PIAS2O75928 621 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 PIGAP37287 484 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 PNLIPRP2P54317 469 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 ZNF628Q5EBL2 1059 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 OR2B11Q5JQS5 317 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 TMEM99Q8N816 258 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 OR52N5Q8NH56 324 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 ARSGQ96EG1 525 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 ASTLQ6HA08 431 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-203ENST00000394872 DLEU7Q6UYE1 221 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 RNF141Q8WVD5 230 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 MRPS24Q96EL2 167 aaKnown RBP9.45□□□□□ -0.9
COL4A6-203ENST00000394872 MED29Q9NX70 200 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 LMO7DNF2Z398 122 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 H0Y8G0 127 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 ACVR1Q04771 509 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 FAM53BQ14153 422 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 CREB3L2Q70SY1 520 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 NLRC3Q7RTR2 1065 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 CDC20BQ86Y33 519 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 ZDHHC23Q8IYP9 409 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 NANOGP1Q8N7R0 232 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 DEFB124Q8NES8 71 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 MITD1Q8WV92 249 aa9.45□□□□□ -0.9
COL4A6-203ENST00000394872 GON7Q9BXV9 100 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms