RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 FGF13Q92913 245 aa11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 SEH1LQ96EE3 360 aa11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 PLEKHA2Q9HB19 425 aa11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 PIN4Q9Y237 131 aaKnown RBP11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 RCL1Q9Y2P8 373 aaKnown RBP11.32□□□□□ -0.6
SLC28A1-203ENST00000394573 SSC5DA1L4H1 1573 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 CTAG2O75638 210 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 WNT11O96014 354 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 CHATP28329 748 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 TEAD1P28347 426 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 PRAMEF8Q5VWM4 474 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 PRAMEF7Q5VXH5 474 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 STAC2Q6ZMT1 411 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 VRK2Q86Y07 508 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 MRPL41Q8IXM3 137 aaKnown RBP11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 ZNF101Q8IZC7 436 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 KLHDC9Q8NEP7 349 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 LMF1Q96S06 567 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 PAAF1Q9BRP4 392 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 CNTNAP3Q9BZ76 1288 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 IL26Q9NPH9 171 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 SLC2A8Q9NY64 477 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 CDV3Q9UKY7 258 aaKnown RBP11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 PLXND1Q9Y4D7 1925 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 PNPP00491 289 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 HKR1P10072 659 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 SERPINA2P20848 420 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 HOXD9P28356 352 aaPredicted RBP11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 ELLP55199 621 aaPredicted RBP11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 DLK1P80370 383 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 HAGHQ16775 308 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 THSD4Q6ZMP0 1018 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 PLPPR4Q7Z2D5 763 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 RTN4RL1Q86UN2 441 aaPredicted RBP11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 ZNF100Q8IYN0 542 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 LINC00471Q8N535 108 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 FAM210BQ96KR6 192 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 SLC5A7Q9GZV3 580 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 Q9N2J8 555 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 SH3BGRL2Q9UJC5 107 aa11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 POLR3KQ9Y2Y1 108 aaPredicted RBP11.31□□□□□ -0.6
SLC28A1-203ENST00000394573 M0QZK8 103 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 DOK2O60496 412 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 PRH1P02810 166 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 IL6RP08887 468 aaPredicted RBP11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 OR5H8P0DN80 308 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 CD37P11049 281 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 PPICP45877 212 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 RAB7AP51149 207 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 POLR2HP52434 150 aaKnown RBP11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 FXYD6P3P58550 94 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 PMS2P11Q13670 270 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 SLC22A25Q6T423 547 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 SLC16A14Q7RTX9 510 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 TMEM183AQ8IXX5 376 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 LYG1Q8N1E2 194 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 ACOT4Q8N9L9 421 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 PLPP5Q8NEB5 264 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 OR9K2Q8NGE7 335 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 NEURL3Q96EH8 262 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 SPATC1LQ9H0A9 340 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 PDFQ9HBH1 243 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 MSL2Q9HCI7 577 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 CSNK1G1Q9HCP0 422 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 HAO2Q9NYQ3 351 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 SRPK3Q9UPE1 567 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 A0A1B0GTH9 108 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 A6NIZ1 184 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 HSBP1L1C9JCN9 74 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 CLDN7O95471 211 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 RPS2P15880 293 aaKnown RBP11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 CD33P20138 364 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 ACRV1P26436 265 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 CHRNB4P30926 498 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 PPP1CCP36873 323 aaKnown RBP11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 NANOS3P60323 173 aaKnown RBP11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 RAP1BP61224 184 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 SRSF5Q13243 272 aaKnown RBP11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 AGERQ15109 404 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 IFI44Q8TCB0 444 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 SLC12A9Q9BXP2 914 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 OR2J1Q9GZK6 312 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 CREBZFQ9NS37 354 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 MSRAQ9UJ68 235 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 PITPNC1Q9UKF7 332 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 POMT1Q9Y6A1 747 aa11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 COL5A3P25940 1745 aaPredicted RBP11.3□□□□□ -0.6
SLC28A1-203ENST00000394573 TRAV8-7A0A075B6U6 113 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 SLC22A31A6NKX4 558 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 GMFGO60234 142 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 ZFPL1O95159 310 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 THY1P04216 161 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 CAMLGP49069 296 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 RAB32Q13637 225 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 SLC22A6Q4U2R8 563 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 FAM71E1Q6IPT2 247 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 EIF5AL1Q6IS14 154 aaKnown RBP11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 COMMD1Q8N668 190 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms