RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 SYT9Q86SS6 491 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 LSMEM1Q8N8F7 131 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 FAM208AQ9UK61 1670 aaKnown RBP12.36□□□□□ -0.43
USP49-203ENST00000394253 A0A1B0GUH1 482 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.36□□□□□ -0.43
USP49-203ENST00000394253 AP4M1O00189 453 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 AQP8O94778 261 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 CDKN2DP55273 166 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 PJVKQ0ZLH3 352 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 PEAK1Q9H792 1746 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 A0A0D9SEW6 157 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 SYT5O00445 386 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 TSPAN13O95857 204 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 TSPAN31Q12999 210 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 OR4S1Q8NGB4 309 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 APOBEC3BQ9UH17 382 aaKnown RBP12.35□□□□□ -0.43
USP49-203ENST00000394253 RNF225M0QZC1 329 aaPredicted RBP12.35□□□□□ -0.43
USP49-203ENST00000394253 GOSR1O95249 250 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 HIST1H1BP16401 226 aaKnown RBP12.35□□□□□ -0.43
USP49-203ENST00000394253 MLF1P58340 268 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 DOC2BQ14184 412 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 TXNDC8Q6A555 127 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 ALOXE3Q9BYJ1 711 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 CD207Q9UJ71 328 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 NXT1Q9UKK6 140 aaKnown RBP12.35□□□□□ -0.43
USP49-203ENST00000394253 SRPK3Q9UPE1 567 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 SOX21Q9Y651 276 aaPredicted RBP12.35□□□□□ -0.43
USP49-203ENST00000394253 TMX2-CTNND1H3BSU7 103 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 FZD6O60353 706 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 OR4D1Q15615 310 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 DND1Q8IYX4 353 aaKnown RBP12.35□□□□□ -0.43
USP49-203ENST00000394253 EXD3Q8N9H8 876 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 OR52L2PQ8NGH6 319 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 C19orf43Q9BQ61 176 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 INSL6Q9Y581 213 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 PIAS2O75928 621 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 ABCD3P28288 659 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 RING1Q06587 406 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 SLC35E4Q6ICL7 350 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 PLXDC2Q6UX71 529 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 GJC3Q8NFK1 279 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 LILRB1Q8NHL6 650 aaPredicted RBP12.35□□□□□ -0.43
USP49-203ENST00000394253 NECTIN4Q96NY8 510 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 MRPL37Q9BZE1 423 aaKnown RBP12.35□□□□□ -0.43
USP49-203ENST00000394253 WASHC3Q9Y3C0 194 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 IFT172Q9UG01 1749 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 ZNF716A6NP11 495 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 M0QYG6 137 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 IL1RNP18510 177 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 MFAP5Q13361 173 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 EXOSC2Q13868 293 aaKnown RBP12.35□□□□□ -0.43
USP49-203ENST00000394253 H1FXQ92522 213 aaKnown RBP12.35□□□□□ -0.43
USP49-203ENST00000394253 DEFB118Q96PH6 123 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 DOLPP1Q86YN1 238 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 FOXN4Q96NZ1 517 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 SLCO1B1Q9Y6L6 691 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 CD46P15529 392 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 FAM110CQ1W6H9 321 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 SLC35D3Q5M8T2 416 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 HSD17B8Q92506 261 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 ZFYVE21Q9BQ24 234 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 EPHX3Q9H6B9 360 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 ENTPD2Q9Y5L3 495 aa12.35□□□□□ -0.43
USP49-203ENST00000394253 GPR37O15354 613 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 BCL2L11O43521 198 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 RPL17P18621 184 aaKnown RBP12.34□□□□□ -0.43
USP49-203ENST00000394253 RPS25P62851 125 aaKnown RBP12.34□□□□□ -0.43
USP49-203ENST00000394253 C10orf71Q711Q0 1435 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 OR4D10Q8NGI6 311 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 BCO2Q9BYV7 579 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 FAM206AQ9NX38 181 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 CBLCQ9ULV8 474 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 ALKBH1Q13686 389 aaKnown RBP12.34□□□□□ -0.43
USP49-203ENST00000394253 OR1C1Q15619 314 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 ADIPOQQ15848 244 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 C11orf91Q3C1V1 193 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 COX19Q49B96 90 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 OR2A14Q96R47 310 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 RHBDL1O75783 438 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 SLC35G1Q2M3R5 365 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 VHLLQ6RSH7 139 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 TTC9Q92623 222 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 ANAPC16Q96DE5 110 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 AKIRIN1Q9H9L7 192 aaPredicted RBP12.34□□□□□ -0.43
USP49-203ENST00000394253 LAMB1P07942 1786 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 XRN1Q8IZH2 1706 aaKnown RBP12.34□□□□□ -0.43
USP49-203ENST00000394253 EIF1BO60739 113 aaKnown RBP12.34□□□□□ -0.43
USP49-203ENST00000394253 GYPAP02724 150 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 CEBPDP49716 269 aaPredicted RBP12.34□□□□□ -0.43
USP49-203ENST00000394253 EMP1P54849 157 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 AANATQ16613 207 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 C10orf126Q8N4M7 172 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 JAM3Q9BX67 310 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 ADM5C9JUS6 153 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 CD200P41217 278 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 EIF1P41567 113 aaKnown RBP12.34□□□□□ -0.43
USP49-203ENST00000394253 ARHGEF39Q8N4T4 335 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 ADPRHL1Q8NDY3 354 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 PLA2G12AQ9BZM1 189 aa12.34□□□□□ -0.43
USP49-203ENST00000394253 TMEM9BQ9NQ34 198 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms