RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 CCDC92Q53HC0 331 aaPredicted RBP26.26■■□□□ 1.79
CMTM4-202ENST00000394106 MBNL2Q5VZF2 373 aaKnown RBP26.26■■□□□ 1.79
CMTM4-202ENST00000394106 PGM2L1Q6PCE3 622 aa26.26■■□□□ 1.79
CMTM4-202ENST00000394106 AQP12AQ8IXF9 295 aa26.26■■□□□ 1.79
CMTM4-202ENST00000394106 OR1F12Q8NHA8 337 aa26.26■■□□□ 1.79
CMTM4-202ENST00000394106 CANT1Q8WVQ1 401 aa26.26■■□□□ 1.79
CMTM4-202ENST00000394106 IL20Q9NYY1 176 aa26.26■■□□□ 1.79
CMTM4-202ENST00000394106 DHRS12A0PJE2 317 aa26.25■■□□□ 1.79
CMTM4-202ENST00000394106 LRP5LA4QPB2 252 aa26.25■■□□□ 1.79
CMTM4-202ENST00000394106 BHLHE40O14503 412 aa26.25■■□□□ 1.79
CMTM4-202ENST00000394106 CRLF1O75462 422 aa26.25■■□□□ 1.79
CMTM4-202ENST00000394106 SOX14O95416 240 aa26.25■■□□□ 1.79
CMTM4-202ENST00000394106 CCL8P80075 99 aa26.25■■□□□ 1.79
CMTM4-202ENST00000394106 FLOT2Q14254 428 aa26.25■■□□□ 1.79
CMTM4-202ENST00000394106 TMEM255AQ5JRV8 349 aa26.25■■□□□ 1.79
CMTM4-202ENST00000394106 CORO6Q6QEF8 472 aa26.25■■□□□ 1.79
CMTM4-202ENST00000394106 ZBTB46Q86UZ6 589 aa26.25■■□□□ 1.79
CMTM4-202ENST00000394106 NPEPL1Q8NDH3 523 aa26.25■■□□□ 1.79
CMTM4-202ENST00000394106 SLC26A10Q8NG04 563 aa26.25■■□□□ 1.79
CMTM4-202ENST00000394106 LHFPL6Q9Y693 200 aa26.25■■□□□ 1.79
CMTM4-202ENST00000394106 OR6C6A6NF89 314 aa26.24■■□□□ 1.79
CMTM4-202ENST00000394106 DNAJC8O75937 253 aaPredicted RBP26.24■■□□□ 1.79
CMTM4-202ENST00000394106 HLA-DQA2P01906 255 aa26.24■■□□□ 1.79
CMTM4-202ENST00000394106 GSTM3P21266 225 aa26.24■■□□□ 1.79
CMTM4-202ENST00000394106 GZMKP49863 264 aa26.24■■□□□ 1.79
CMTM4-202ENST00000394106 TEKQ02763 1124 aa26.24■■□□□ 1.79
CMTM4-202ENST00000394106 PCGF3Q3KNV8 242 aa26.24■■□□□ 1.79
CMTM4-202ENST00000394106 SPATA24Q86W54 205 aa26.24■■□□□ 1.79
CMTM4-202ENST00000394106 CYB561A3Q8NBI2 242 aa26.24■■□□□ 1.79
CMTM4-202ENST00000394106 OR10G2Q8NGC3 310 aa26.24■■□□□ 1.79
CMTM4-202ENST00000394106 YIPF5Q969M3 257 aa26.24■■□□□ 1.79
CMTM4-202ENST00000394106 TSSK6Q9BXA6 273 aa26.24■■□□□ 1.79
CMTM4-202ENST00000394106 DGCR6LQ9BY27 220 aa26.24■■□□□ 1.79
CMTM4-202ENST00000394106 CHODLQ9H9P2 273 aa26.24■■□□□ 1.79
CMTM4-202ENST00000394106 GNGT2O14610 69 aa26.23■■□□□ 1.79
CMTM4-202ENST00000394106 TPD52L2O43399 206 aaKnown RBP26.23■■□□□ 1.79
CMTM4-202ENST00000394106 TFP02787 698 aa26.23■■□□□ 1.79
CMTM4-202ENST00000394106 ACHEP22303 614 aa26.23■■□□□ 1.79
CMTM4-202ENST00000394106 ZNF81P51508 661 aa26.23■■□□□ 1.79
CMTM4-202ENST00000394106 CHN2P52757 468 aa26.23■■□□□ 1.79
CMTM4-202ENST00000394106 TRIP10Q15642 601 aa26.23■■□□□ 1.79
CMTM4-202ENST00000394106 TSTQ16762 297 aaKnown RBP26.23■■□□□ 1.79
CMTM4-202ENST00000394106 GJC3Q8NFK1 279 aa26.23■■□□□ 1.79
CMTM4-202ENST00000394106 POFUT1Q9H488 388 aa26.23■■□□□ 1.79
CMTM4-202ENST00000394106 TBCCD1Q9NVR7 557 aa26.23■■□□□ 1.79
CMTM4-202ENST00000394106 SONP18583 2426 aaKnown RBP26.23■■□□□ 1.79
CMTM4-202ENST00000394106 PLSCR5A0PG75 271 aa26.22■■□□□ 1.79
CMTM4-202ENST00000394106 H3BSA7 217 aa26.22■■□□□ 1.79
CMTM4-202ENST00000394106 SLC36A3Q495N2 470 aa26.22■■□□□ 1.79
CMTM4-202ENST00000394106 LINC00346Q8IVM7 164 aa26.22■■□□□ 1.79
CMTM4-202ENST00000394106 GIPC3Q8TF64 312 aa26.22■■□□□ 1.79
CMTM4-202ENST00000394106 DECR2Q9NUI1 292 aa26.22■■□□□ 1.79
CMTM4-202ENST00000394106 ARMC1Q9NVT9 282 aa26.22■■□□□ 1.79
CMTM4-202ENST00000394106 SPRY3O43610 288 aa26.21■■□□□ 1.79
CMTM4-202ENST00000394106 CDC14BO60729 498 aa26.21■■□□□ 1.79
CMTM4-202ENST00000394106 LILRA1O75019 489 aa26.21■■□□□ 1.79
CMTM4-202ENST00000394106 DBHP09172 617 aa26.21■■□□□ 1.79
CMTM4-202ENST00000394106 TACSTD2P09758 323 aa26.21■■□□□ 1.79
CMTM4-202ENST00000394106 PYCR1P32322 319 aa26.21■■□□□ 1.79
CMTM4-202ENST00000394106 GPR6P46095 362 aaPredicted RBP26.21■■□□□ 1.79
CMTM4-202ENST00000394106 ERFP50548 548 aa26.21■■□□□ 1.79
CMTM4-202ENST00000394106 PROKR2Q8NFJ6 384 aa26.21■■□□□ 1.79
CMTM4-202ENST00000394106 OR4Q3Q8NH05 313 aa26.21■■□□□ 1.79
CMTM4-202ENST00000394106 NIPSNAP1Q9BPW8 284 aa26.21■■□□□ 1.79
CMTM4-202ENST00000394106 CDADC1Q9BWV3 514 aa26.21■■□□□ 1.79
CMTM4-202ENST00000394106 ZNF275Q9NSD4 429 aaPredicted RBP26.21■■□□□ 1.79
CMTM4-202ENST00000394106 NKIRAS2Q9NYR9 191 aa26.21■■□□□ 1.79
CMTM4-202ENST00000394106 POMPQ9Y244 141 aa26.21■■□□□ 1.79
CMTM4-202ENST00000394106 TIMM8AO60220 97 aaPredicted RBP26.2■■□□□ 1.78
CMTM4-202ENST00000394106 MMP15P51511 669 aa26.2■■□□□ 1.78
CMTM4-202ENST00000394106 HIST1H3AP68431 136 aa26.2■■□□□ 1.78
CMTM4-202ENST00000394106 MRPS11P82912 194 aaKnown RBP26.2■■□□□ 1.78
CMTM4-202ENST00000394106 COX10Q12887 443 aa26.2■■□□□ 1.78
CMTM4-202ENST00000394106 GK3PQ14409 553 aa26.2■■□□□ 1.78
CMTM4-202ENST00000394106 HIST2H3PS2Q5TEC6 136 aa26.2■■□□□ 1.78
CMTM4-202ENST00000394106 HIST2H3AQ71DI3 136 aa26.2■■□□□ 1.78
CMTM4-202ENST00000394106 LNX2Q8N448 690 aa26.2■■□□□ 1.78
CMTM4-202ENST00000394106 SLC37A3Q8NCC5 494 aa26.2■■□□□ 1.78
CMTM4-202ENST00000394106 MSI2Q96DH6 328 aaKnown RBP26.2■■□□□ 1.78
CMTM4-202ENST00000394106 FEVQ99581 238 aa26.2■■□□□ 1.78
CMTM4-202ENST00000394106 HDHD2Q9H0R4 259 aa26.2■■□□□ 1.78
CMTM4-202ENST00000394106 ATPIF1Q9UII2 106 aa26.2■■□□□ 1.78
CMTM4-202ENST00000394106 STARD10Q9Y365 291 aa26.2■■□□□ 1.78
CMTM4-202ENST00000394106 LOC100289279A0A1B0GTE1 492 aa26.19■■□□□ 1.78
CMTM4-202ENST00000394106 ZSCAN5BA6NJL1 495 aa26.19■■□□□ 1.78
CMTM4-202ENST00000394106 IGHV1-46P01743 117 aa26.19■■□□□ 1.78
CMTM4-202ENST00000394106 IL2RGP31785 369 aa26.19■■□□□ 1.78
CMTM4-202ENST00000394106 BNIP1Q12981 228 aa26.19■■□□□ 1.78
CMTM4-202ENST00000394106 SLC18B1Q6NT16 456 aa26.19■■□□□ 1.78
CMTM4-202ENST00000394106 OR2T33Q8NG76 320 aa26.19■■□□□ 1.78
CMTM4-202ENST00000394106 OR2AJ1Q8NGZ0 328 aa26.19■■□□□ 1.78
CMTM4-202ENST00000394106 OR2T4Q8NH00 348 aa26.19■■□□□ 1.78
CMTM4-202ENST00000394106 DDOQ99489 341 aa26.19■■□□□ 1.78
CMTM4-202ENST00000394106 SOX7Q9BT81 388 aa26.19■■□□□ 1.78
CMTM4-202ENST00000394106 NARFLQ9H6Q4 476 aa26.19■■□□□ 1.78
CMTM4-202ENST00000394106 CYSLTR2Q9NS75 346 aa26.19■■□□□ 1.78
CMTM4-202ENST00000394106 BAIAP2Q9UQB8 552 aa26.19■■□□□ 1.78
CMTM4-202ENST00000394106 PPIHO43447 177 aaKnown RBP26.18■■□□□ 1.78
CMTM4-202ENST00000394106 PSG7Q13046 419 aa26.18■■□□□ 1.78
CMTM4-202ENST00000394106 CCNIQ14094 377 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms