RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 VASH1Q7L8A9 365 aaPredicted RBP14.72□□□□□ -0.05
SNRPA1-202ENST00000394082 MUC20Q8N307 709 aaPredicted RBP14.72□□□□□ -0.05
SNRPA1-202ENST00000394082 OR2Z1Q8NG97 314 aa14.72□□□□□ -0.05
SNRPA1-202ENST00000394082 OR13C2Q8NGS9 318 aa14.72□□□□□ -0.05
SNRPA1-202ENST00000394082 DCLRE1CQ96SD1 692 aaKnown RBP14.72□□□□□ -0.05
SNRPA1-202ENST00000394082 MRI1Q9BV20 369 aa14.72□□□□□ -0.05
SNRPA1-202ENST00000394082 DCAF16Q9NXF7 216 aa14.72□□□□□ -0.05
SNRPA1-202ENST00000394082 IL20RAQ9UHF4 553 aa14.72□□□□□ -0.05
SNRPA1-202ENST00000394082 LRCH1Q9Y2L9 728 aa14.72□□□□□ -0.05
SNRPA1-202ENST00000394082 OR6C6A6NF89 314 aa14.71□□□□□ -0.05
SNRPA1-202ENST00000394082 RGS6P49758 472 aa14.71□□□□□ -0.05
SNRPA1-202ENST00000394082 GUCY1A3Q02108 690 aa14.71□□□□□ -0.05
SNRPA1-202ENST00000394082 PAX8Q06710 450 aa14.71□□□□□ -0.05
SNRPA1-202ENST00000394082 ZMYND11Q15326 602 aa14.71□□□□□ -0.05
SNRPA1-202ENST00000394082 ZBED5Q49AG3 693 aa14.71□□□□□ -0.05
SNRPA1-202ENST00000394082 KLF17Q5JT82 389 aaPredicted RBP14.71□□□□□ -0.05
SNRPA1-202ENST00000394082 ZNF730Q6ZMV8 503 aa14.71□□□□□ -0.05
SNRPA1-202ENST00000394082 SIGLECL1Q8N7X8 197 aa14.71□□□□□ -0.05
SNRPA1-202ENST00000394082 C22orf15Q8WYQ4 148 aa14.71□□□□□ -0.05
SNRPA1-202ENST00000394082 CMBLQ96DG6 245 aa14.71□□□□□ -0.05
SNRPA1-202ENST00000394082 NMNAT1Q9HAN9 279 aaPredicted RBP14.71□□□□□ -0.05
SNRPA1-202ENST00000394082 EMC7Q9NPA0 242 aa14.71□□□□□ -0.05
SNRPA1-202ENST00000394082 TMEM5Q9Y2B1 443 aa14.71□□□□□ -0.05
SNRPA1-202ENST00000394082 STARD10Q9Y365 291 aa14.71□□□□□ -0.05
SNRPA1-202ENST00000394082 PPIAL4AQ9Y536 164 aa14.71□□□□□ -0.05
SNRPA1-202ENST00000394082 SNX13Q9Y5W8 968 aa14.71□□□□□ -0.05
SNRPA1-202ENST00000394082 LOC100653049A0A140TA62 436 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 TMEM178BH3BS89 294 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 CDC42EP2O14613 210 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 TMPRSS2O15393 492 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 KRT34O76011 436 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 FUT4P22083 530 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 RPL4P36578 427 aaKnown RBP14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 KCNMB1Q16558 191 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 ZNF181Q2M3W8 571 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 ESCO2Q56NI9 601 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 MESTQ5EB52 335 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 GPR139Q6DWJ6 353 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 FBXW12Q6X9E4 464 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 C9orf139Q6ZV77 190 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 CBLL1Q75N03 491 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 VTCN1Q7Z7D3 282 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 OR5L1Q8NGL2 311 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 ITLN1Q8WWA0 313 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 RASD2Q96D21 266 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 Q96M85 177 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 OR2V2Q96R30 315 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 GPX7Q96SL4 187 aaPredicted RBP14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 POFUT1Q9H488 388 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 GCM1Q9NP62 436 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 ZNF69Q9UC07 566 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 ADAM18Q9Y3Q7 739 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 TRRAPQ9Y4A5 3859 aa14.7□□□□□ -0.06
SNRPA1-202ENST00000394082 A0A1B0GWJ7 208 aa14.69□□□□□ -0.06
SNRPA1-202ENST00000394082 POM121CA8CG34 1229 aa14.69□□□□□ -0.06
SNRPA1-202ENST00000394082 H7C1C5 153 aa14.69□□□□□ -0.06
SNRPA1-202ENST00000394082 J3KTA2 159 aa14.69□□□□□ -0.06
SNRPA1-202ENST00000394082 RNASE1P07998 156 aaKnown RBP14.69□□□□□ -0.06
SNRPA1-202ENST00000394082 WNT2P09544 360 aa14.69□□□□□ -0.06
SNRPA1-202ENST00000394082 CTLA4P16410 223 aa14.69□□□□□ -0.06
SNRPA1-202ENST00000394082 ZNF26P17031 533 aaPredicted RBP14.69□□□□□ -0.06
SNRPA1-202ENST00000394082 SDHAP31040 664 aa14.69□□□□□ -0.06
SNRPA1-202ENST00000394082 LCN6P62502 163 aa14.69□□□□□ -0.06
SNRPA1-202ENST00000394082 PAX2Q02962 417 aa14.69□□□□□ -0.06
SNRPA1-202ENST00000394082 IFI44LQ53G44 452 aa14.69□□□□□ -0.06
SNRPA1-202ENST00000394082 RRM2BQ7LG56 351 aa14.69□□□□□ -0.06
SNRPA1-202ENST00000394082 ADCK1Q86TW2 530 aa14.69□□□□□ -0.06
SNRPA1-202ENST00000394082 GLB1L2Q8IW92 636 aa14.69□□□□□ -0.06
SNRPA1-202ENST00000394082 OR1F12Q8NHA8 337 aa14.69□□□□□ -0.06
SNRPA1-202ENST00000394082 ZNF570Q96NI8 536 aa14.69□□□□□ -0.06
SNRPA1-202ENST00000394082 NRIP3Q9NQ35 241 aa14.69□□□□□ -0.06
SNRPA1-202ENST00000394082 CMTM6Q9NX76 183 aa14.69□□□□□ -0.06
SNRPA1-202ENST00000394082 VSX1Q9NZR4 365 aaPredicted RBP14.69□□□□□ -0.06
SNRPA1-202ENST00000394082 RHCGQ9UBD6 479 aa14.69□□□□□ -0.06
SNRPA1-202ENST00000394082 OR5V1Q9UGF6 321 aa14.69□□□□□ -0.06
SNRPA1-202ENST00000394082 PCDHGB1Q9Y5G3 927 aa14.69□□□□□ -0.06
SNRPA1-202ENST00000394082 A0A1W2PRQ8 180 aa14.68□□□□□ -0.06
SNRPA1-202ENST00000394082 DNAJC9-AS1A6NH13 148 aa14.68□□□□□ -0.06
SNRPA1-202ENST00000394082 PTP4A3O75365 173 aa14.68□□□□□ -0.06
SNRPA1-202ENST00000394082 KHDRBS3O75525 346 aaKnown RBP14.68□□□□□ -0.06
SNRPA1-202ENST00000394082 SASH3O75995 380 aa14.68□□□□□ -0.06
SNRPA1-202ENST00000394082 YAP1P46937 504 aaKnown RBP14.68□□□□□ -0.06
SNRPA1-202ENST00000394082 MMP16P51512 607 aa14.68□□□□□ -0.06
SNRPA1-202ENST00000394082 SEC61A1P61619 476 aaKnown RBP14.68□□□□□ -0.06
SNRPA1-202ENST00000394082 DGCR6Q14129 220 aa14.68□□□□□ -0.06
SNRPA1-202ENST00000394082 PGM2L1Q6PCE3 622 aa14.68□□□□□ -0.06
SNRPA1-202ENST00000394082 LRRN1Q6UXK5 716 aa14.68□□□□□ -0.06
SNRPA1-202ENST00000394082 ZNF771Q7L3S4 317 aaPredicted RBP14.68□□□□□ -0.06
SNRPA1-202ENST00000394082 SLC15A3Q8IY34 581 aa14.68□□□□□ -0.06
SNRPA1-202ENST00000394082 OR8G5Q8NG78 346 aa14.68□□□□□ -0.06
SNRPA1-202ENST00000394082 OR13G1Q8NGZ3 307 aa14.68□□□□□ -0.06
SNRPA1-202ENST00000394082 RP9Q8TA86 221 aaKnown RBP14.68□□□□□ -0.06
SNRPA1-202ENST00000394082 C1orf147Q96MC9 270 aaPredicted RBP14.68□□□□□ -0.06
SNRPA1-202ENST00000394082 ASH2LQ9UBL3 628 aa14.68□□□□□ -0.06
SNRPA1-202ENST00000394082 SIGLEC7Q9Y286 467 aa14.68□□□□□ -0.06
SNRPA1-202ENST00000394082 CAPN7Q9Y6W3 813 aa14.68□□□□□ -0.06
SNRPA1-202ENST00000394082 CEACAM18A8MTB9 384 aa14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 CXCR6O00574 342 aa14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 NDUFAB1O14561 156 aa14.67□□□□□ -0.06
SNRPA1-202ENST00000394082 NDUFB2O95178 105 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms