RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 RBP7Q96R05 134 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 CMSS1Q9BQ75 279 aaKnown RBP3.08□□□□□ -1.92
XRN1-202ENST00000392981 SLC25A33Q9BSK2 321 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 MLST8Q9BVC4 326 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 EDA2RQ9HAV5 297 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 PATZ1Q9HBE1 687 aaKnown RBP3.08□□□□□ -1.92
XRN1-202ENST00000392981 TAAR2Q9P1P5 351 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 ZNF221Q9UK13 617 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 ERGIC3Q9Y282 383 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 ALG5Q9Y673 324 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 C9J4A7 227 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 MAGEB4O15481 346 aaPredicted RBP3.08□□□□□ -1.92
XRN1-202ENST00000392981 OR8U9P0C7N5 309 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 SLC35E2BP0CK96 405 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 PRPS1L1P21108 318 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 AK4P27144 223 aaPredicted RBP3.08□□□□□ -1.92
XRN1-202ENST00000392981 GTF2H1P32780 548 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 ELK3P41970 407 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 OR4D2P58180 307 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 CXCR4P61073 352 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 BLOC1S1P78537 153 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 TCP10Q12799 353 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 SLAMF1Q13291 335 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 CLINT1Q14677 625 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 GPNMBQ14956 572 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 ISXQ2M1V0 245 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 ACTBL2Q562R1 376 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 TFDP3Q5H9I0 405 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 HIST2H3AQ71DI3 136 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 BHLHA15Q7RTS1 189 aaPredicted RBP3.08□□□□□ -1.92
XRN1-202ENST00000392981 ATG4DQ86TL0 474 aaPredicted RBP3.08□□□□□ -1.92
XRN1-202ENST00000392981 OR4N5Q8IXE1 308 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 PRSS58Q8IYP2 241 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 RDH10Q8IZV5 341 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 FAM89BQ8N5H3 189 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 RFLNBQ8N5W9 214 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 OR8U1Q8NH10 309 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 C20orf173Q96LM9 149 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 C2orf48Q96LS8 159 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 CPXM1Q96SM3 734 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 THAP7Q9BT49 309 aaPredicted RBP3.08□□□□□ -1.92
XRN1-202ENST00000392981 SSBP4Q9BWG4 385 aaPredicted RBP3.08□□□□□ -1.92
XRN1-202ENST00000392981 POTEKPQ9BYX7 375 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 LHX5Q9H2C1 402 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 KLK15Q9H2R5 256 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 IMP3Q9NV31 184 aaKnown RBP3.08□□□□□ -1.92
XRN1-202ENST00000392981 CYB5R1Q9UHQ9 305 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 ZNF107Q9UII5 783 aaPredicted RBP3.08□□□□□ -1.92
XRN1-202ENST00000392981 PCYT1BQ9Y5K3 369 aaPredicted RBP3.08□□□□□ -1.92
XRN1-202ENST00000392981 TNFRSF18Q9Y5U5 241 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 TSPOAP1O95153 1857 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 TRPM3Q9HCF6 1732 aaPredicted RBP3.08□□□□□ -1.92
XRN1-202ENST00000392981 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.08□□□□□ -1.92
XRN1-202ENST00000392981 HFM1A2PYH4 1435 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 CASKIN1Q8WXD9 1431 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 KCNE1BA0A087WTH5 132 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 SAA2-SAA4A0A096LPE2 208 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 SMIM31A0A1B0GVY4 71 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 SLC22A1O15245 554 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 FABP7O15540 132 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 RGS14O43566 566 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 PI15O43692 258 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 NOS1APO75052 506 aaPredicted RBP3.08□□□□□ -1.92
XRN1-202ENST00000392981 SOX30O94993 753 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 CD160O95971 181 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 CCNE1P24864 410 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 PYCR1P32322 319 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 OPRL1P41146 370 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 NR4A2P43354 598 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 CDK9P50750 372 aaKnown RBP3.08□□□□□ -1.92
XRN1-202ENST00000392981 OR2T5Q6IEZ7 315 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 LCN10Q6JVE6 187 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 TRNP1Q6NT89 227 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 FRRS1Q6ZNA5 592 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 ZNF843Q8N446 348 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 OR2T29Q8NH02 315 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 EXTL1Q92935 676 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 HGDQ93099 445 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 KAZALD1Q96I82 304 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 PSMB7Q99436 277 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 SHARPINQ9H0F6 387 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 ZCCHC4Q9H5U6 513 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 MAP6D1Q9H9H5 199 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 PURGQ9UJV8 347 aaKnown RBP3.08□□□□□ -1.92
XRN1-202ENST00000392981 CPQQ9Y646 472 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 LMTK2Q8IWU2 1503 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 RGPD1P0DJD0 1748 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 STK36Q9NRP7 1315 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 CAMTA1Q9Y6Y1 1673 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 FUOMA2VDF0 154 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 TNFRSF13BO14836 293 aaPredicted RBP3.08□□□□□ -1.92
XRN1-202ENST00000392981 HPGDSO60760 199 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 RFPL2O75678 378 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 PROZP22891 400 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 IVDP26440 423 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 NKX2-5P52952 324 aaPredicted RBP3.08□□□□□ -1.92
XRN1-202ENST00000392981 EMP2P54851 167 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 MAPK14Q16539 360 aa3.08□□□□□ -1.92
XRN1-202ENST00000392981 RBM48Q5RL73 367 aaKnown RBP3.08□□□□□ -1.92
XRN1-202ENST00000392981 RWDD4Q6NW29 188 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms