RNA–Protein interactions for RNA: ENST00000392004.7

COL6A3-205, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best) BASIC

Gene COL6A3, Length 4,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-205ENST00000392004 THSD4Q6ZMP0 1018 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 GID4Q8IVV7 300 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 OR9K2Q8NGE7 335 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 PIGCQ92535 297 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 ADIPOR1Q96A54 375 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 RFT1Q96AA3 541 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 TMEM43Q9BTV4 400 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 DIMT1Q9UNQ2 313 aaKnown RBP9.22□□□□□ -0.93
COL6A3-205ENST00000392004 HELZP42694 1942 aaKnown RBP9.22□□□□□ -0.93
COL6A3-205ENST00000392004 A6NIZ1 184 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 SLC19A2O60779 497 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 B3GALNT1O75752 331 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 CSTBP04080 98 aaKnown RBP9.22□□□□□ -0.93
COL6A3-205ENST00000392004 IGKV3-11P04433 115 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 GUSBP08236 651 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 OMPP47874 163 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 HMGA2P52926 109 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 RAP1BP61224 184 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 RAP1AP62834 184 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 MGAT2Q10469 447 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 BCL2L15Q5TBC7 163 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 ESPNLQ6ZVH7 1005 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 DCXRQ7Z4W1 244 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 ZNF680Q8NEM1 530 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 OR4M1Q8NGD0 313 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 NANOS1Q8WY41 292 aaKnown RBP9.22□□□□□ -0.93
COL6A3-205ENST00000392004 IMMP1LQ96LU5 166 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 MARVELD1Q9BSK0 173 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 UFSP2Q9NUQ7 469 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 NKIRAS2Q9NYR9 191 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 EXTL2Q9UBQ6 330 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 SESN1Q9Y6P5 492 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 SETD2Q9BYW2 2564 aaPredicted RBP9.22□□□□□ -0.93
COL6A3-205ENST00000392004 DNAH14Q0VDD8 3507 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 HIVEP3Q5T1R4 2406 aa9.22□□□□□ -0.93
COL6A3-205ENST00000392004 ARRDC5A6NEK1 342 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 NPIPB8E9PQR5 432 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 GCM2O75603 506 aaPredicted RBP9.21□□□□□ -0.93
COL6A3-205ENST00000392004 MPZL1O95297 269 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 HLA-DPB1P04440 258 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 PTBP1P26599 531 aaKnown RBP eCLIP9.21□□□□□ -0.93
COL6A3-205ENST00000392004 MALLQ13021 153 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.21□□□□□ -0.93
COL6A3-205ENST00000392004 FAM122CQ6P4D5 195 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 ADGRG3Q86Y34 549 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 OR52I1Q8NGK6 324 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 MARVELD3Q96A59 401 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 UPRTQ96BW1 309 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 C4orf36Q96KX1 117 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 ALG8Q9BVK2 526 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 BCL2L14Q9BZR8 327 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 CHMP1AQ9HD42 196 aaPredicted RBP9.21□□□□□ -0.93
COL6A3-205ENST00000392004 HINT3Q9NQE9 182 aaKnown RBP9.21□□□□□ -0.93
COL6A3-205ENST00000392004 UBQLN2Q9UHD9 624 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 ZMIZ1Q9ULJ6 1067 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 TRAV6A0A075B6T7 132 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 SERTM1A2A2V5 107 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 LINC00862A6NCI5 91 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 TBX19O60806 448 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 C4BPBP20851 252 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 SELENOPP49908 381 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 ETV1P50549 477 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 ZNF81P51508 661 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 MVDP53602 400 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 RPL27P61353 136 aaKnown RBP9.21□□□□□ -0.93
COL6A3-205ENST00000392004 BTG1P62324 171 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 RAC1P63000 192 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 P2RY14Q15391 338 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 OCLNQ16625 522 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 NKAPLQ5M9Q1 402 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 PIP4P1Q86T03 277 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 SLC35F2Q8IXU6 374 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 OR2M3Q8NG83 312 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 NEIL3Q8TAT5 605 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 KISS1RQ969F8 398 aaPredicted RBP9.21□□□□□ -0.93
COL6A3-205ENST00000392004 FBXO17Q96EF6 278 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 NKX3-1Q99801 234 aaPredicted RBP9.21□□□□□ -0.93
COL6A3-205ENST00000392004 RTN4RQ9BZR6 473 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 ABCG5Q9H222 651 aa9.21□□□□□ -0.93
COL6A3-205ENST00000392004 A0A0B4J2E0 115 aa9.21□□□□□ -0.94
COL6A3-205ENST00000392004 A0A1B0GX12 115 aa9.21□□□□□ -0.94
COL6A3-205ENST00000392004 C5orf49A4QMS7 147 aa9.21□□□□□ -0.94
COL6A3-205ENST00000392004 PRB1P04280 392 aa9.21□□□□□ -0.94
COL6A3-205ENST00000392004 TMIGD3P0DMS9 266 aaPredicted RBP9.21□□□□□ -0.94
COL6A3-205ENST00000392004 SHC1P29353 583 aa9.21□□□□□ -0.94
COL6A3-205ENST00000392004 EVX1P49640 407 aa9.21□□□□□ -0.94
COL6A3-205ENST00000392004 GALEQ14376 348 aa9.21□□□□□ -0.94
COL6A3-205ENST00000392004 TEX261Q6UWH6 196 aa9.21□□□□□ -0.94
COL6A3-205ENST00000392004 CEACAM19Q7Z692 300 aa9.21□□□□□ -0.94
COL6A3-205ENST00000392004 RNF113BQ8IZP6 322 aaKnown RBP9.21□□□□□ -0.94
COL6A3-205ENST00000392004 C9orf62Q8N4C0 152 aa9.21□□□□□ -0.94
COL6A3-205ENST00000392004 DEFB108BQ8NET1 73 aa9.21□□□□□ -0.94
COL6A3-205ENST00000392004 FAM46BQ96A09 425 aa9.21□□□□□ -0.94
COL6A3-205ENST00000392004 ZBTB8AQ96BR9 441 aa9.21□□□□□ -0.94
COL6A3-205ENST00000392004 SLC25A18Q9H1K4 315 aa9.21□□□□□ -0.94
COL6A3-205ENST00000392004 EXOSC1Q9Y3B2 195 aaKnown RBP9.21□□□□□ -0.94
COL6A3-205ENST00000392004 U3KQ87 197 aa9.21□□□□□ -0.94
COL6A3-205ENST00000392004 NUP210Q8TEM1 1887 aaPredicted RBP9.21□□□□□ -0.94
COL6A3-205ENST00000392004 SYT7O43581 403 aa9.21□□□□□ -0.94
COL6A3-205ENST00000392004 NTRK2Q16620 822 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms