RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 SRSF12Q8WXF0 261 aaKnown RBP3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 FOPNLQ96NB1 174 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 VCXQ9H320 206 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 TMEM38AQ9H6F2 299 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 CRLF2Q9HC73 371 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 RPRD1BQ9NQG5 326 aaKnown RBP3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 ZC4H2Q9NQZ6 224 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 AHSPQ9NZD4 102 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 RAB26Q9ULW5 256 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 PSG8Q9UQ74 426 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 TET2Q6N021 2002 aaPredicted RBP3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 MN1Q10571 1320 aaPredicted RBP3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 GOLGA6L7A0A1B0GV03 622 aa3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 A0A1W2PP18 115 aa3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 A0A1W2PRD5 423 aa3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 TMEM120BA0PK00 339 aa3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 L7N2F9 121 aa3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 SLC9A3R1O14745 358 aaPredicted RBP3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 FCN3O75636 299 aa3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 FLOT1O75955 427 aa3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 IFNW1P05000 195 aa3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 EIF4EP06730 217 aaKnown RBP3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 UBTFL6P0CB48 400 aaPredicted RBP3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 ERGP11308 486 aa3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 RAB3AP20336 220 aa3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 P2RX1P51575 399 aa3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 LRRC63Q05C16 580 aa3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 CDH17Q12864 832 aa3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 ART3Q13508 389 aa3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 CAPRIN1Q14444 709 aaKnown RBP3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 C12orf54Q6X4T0 127 aa3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 C12orf56Q8IXR9 622 aa3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 METTL13Q8N6R0 699 aa3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 ZFP41Q8N8Y5 198 aa3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 OR52E2Q8NGJ4 325 aa3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 OR6Q1Q8NGQ2 317 aa3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 ISG20Q96AZ6 181 aaKnown RBP3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 C9orf72Q96LT7 481 aa3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 OR2A5Q96R48 311 aa3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 TBX21Q9UL17 535 aa3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 PLEKHG2Q9H7P9 1386 aa3.5□□□□□ -1.85
RNU6-40P-201ENST00000384254 TSPAN11A1L157 253 aa3.49□□□□□ -1.85
RNU6-40P-201ENST00000384254 MAGEB4O15481 346 aaPredicted RBP3.49□□□□□ -1.85
RNU6-40P-201ENST00000384254 MED6O75586 246 aa3.49□□□□□ -1.85
RNU6-40P-201ENST00000384254 AQP8O94778 261 aa3.49□□□□□ -1.85
RNU6-40P-201ENST00000384254 CD160O95971 181 aa3.49□□□□□ -1.85
RNU6-40P-201ENST00000384254 BCHEP06276 602 aa3.49□□□□□ -1.85
RNU6-40P-201ENST00000384254 RPS9P46781 194 aaKnown RBP3.49□□□□□ -1.85
RNU6-40P-201ENST00000384254 HCAR3P49019 387 aa3.49□□□□□ -1.85
RNU6-40P-201ENST00000384254 PPP1CBP62140 327 aa3.49□□□□□ -1.85
RNU6-40P-201ENST00000384254 RAB11AP62491 216 aa3.49□□□□□ -1.85
RNU6-40P-201ENST00000384254 DNAJC3Q13217 504 aa3.49□□□□□ -1.85
RNU6-40P-201ENST00000384254 DOC2AQ14183 400 aa3.49□□□□□ -1.85
RNU6-40P-201ENST00000384254 RAB11BQ15907 218 aa3.49□□□□□ -1.85
RNU6-40P-201ENST00000384254 DEFB116Q30KQ4 102 aa3.49□□□□□ -1.85
RNU6-40P-201ENST00000384254 PLET1Q6UQ28 207 aa3.49□□□□□ -1.85
RNU6-40P-201ENST00000384254 APRG1Q8IVJ8 170 aa3.49□□□□□ -1.85
RNU6-40P-201ENST00000384254 ZNF547Q8IVP9 402 aa3.49□□□□□ -1.85
RNU6-40P-201ENST00000384254 FAM71AQ8IYT1 594 aa3.49□□□□□ -1.85
RNU6-40P-201ENST00000384254 OR52E5Q8NH55 327 aa3.49□□□□□ -1.85
RNU6-40P-201ENST00000384254 OPALINQ96PE5 141 aa3.49□□□□□ -1.85
RNU6-40P-201ENST00000384254 ANKRD60Q9BZ19 345 aa3.49□□□□□ -1.85
RNU6-40P-201ENST00000384254 BLZF1Q9H2G9 400 aa3.49□□□□□ -1.85
RNU6-40P-201ENST00000384254 CLN6Q9NWW5 311 aa3.49□□□□□ -1.85
RNU6-40P-201ENST00000384254 KLK12Q9UKR0 248 aa3.49□□□□□ -1.85
RNU6-40P-201ENST00000384254 A6NDN8 102 aa3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 SYCE1LA8MT33 242 aa3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 HSBP1O75506 76 aa3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 KRT16P08779 473 aa3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 CD3GP09693 182 aa3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 IL32P24001 234 aa3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 RFC3P40938 356 aa3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 RAB7AP51149 207 aa3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 SPAG1Q07617 926 aa3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 MADCAM1Q13477 382 aa3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 IRF4Q15306 451 aa3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 TRMT5Q32P41 509 aaKnown RBP3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 CHRFAM7AQ494W8 412 aa3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 ORMDL2Q53FV1 153 aa3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 DNAJC24Q6P3W2 148 aa3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 NPSR1Q6W5P4 371 aa3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 FAM86B1Q8N7N1 296 aa3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 C8orf31Q8N9H6 132 aa3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 INO80EQ8NBZ0 244 aaPredicted RBP3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 CA5BP1Q8WTZ4 195 aa3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 MRGPRFQ96AM1 343 aa3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 DCPSQ96C86 337 aaKnown RBP3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 CHAC1Q9BUX1 264 aa3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 SPNS1Q9H2V7 528 aa3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 RPP21Q9H633 154 aaKnown RBP3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 SYNDIG1Q9H7V2 258 aa3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 SLC39A1Q9NY26 324 aa3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 PRRC2AP48634 2157 aaKnown RBP3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 COL16A1Q07092 1604 aaPredicted RBP3.48□□□□□ -1.85
RNU6-40P-201ENST00000384254 DENND4AQ7Z401 1863 aa3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 K7EMT4 169 aa3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 BCKDKO14874 412 aa3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 AKR7A2O43488 359 aa3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 ENTPD5O75356 428 aa3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 HPRT1P00492 218 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms