RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 PLEKHF2Q9H8W4 249 aa12.77□□□□□ -0.36
SNPH-201ENST00000381867 HSD17B6O14756 317 aa12.77□□□□□ -0.37
SNPH-201ENST00000381867 TPOP07202 933 aa12.77□□□□□ -0.37
SNPH-201ENST00000381867 NKAIN2Q5VXU1 208 aa12.77□□□□□ -0.37
SNPH-201ENST00000381867 RFLNAQ6ZTI6 216 aa12.77□□□□□ -0.37
SNPH-201ENST00000381867 SEMA6DQ8NFY4 1073 aa12.77□□□□□ -0.37
SNPH-201ENST00000381867 C6orf106Q9H6K1 298 aaPredicted RBP12.77□□□□□ -0.37
SNPH-201ENST00000381867 LYRM4Q9HD34 91 aa12.77□□□□□ -0.37
SNPH-201ENST00000381867 OR5H14A6NHG9 310 aa12.77□□□□□ -0.37
SNPH-201ENST00000381867 TGFBR1P36897 503 aa12.77□□□□□ -0.37
SNPH-201ENST00000381867 CCL11P51671 97 aa12.77□□□□□ -0.37
SNPH-201ENST00000381867 P2RX3P56373 397 aa12.77□□□□□ -0.37
SNPH-201ENST00000381867 IL34Q6ZMJ4 242 aa12.77□□□□□ -0.37
SNPH-201ENST00000381867 DBX2Q6ZNG2 339 aa12.77□□□□□ -0.37
SNPH-201ENST00000381867 OLIG1Q8TAK6 271 aa12.77□□□□□ -0.37
SNPH-201ENST00000381867 TMEM231Q9H6L2 316 aa12.77□□□□□ -0.37
SNPH-201ENST00000381867 HEYLQ9NQ87 328 aaPredicted RBP12.77□□□□□ -0.37
SNPH-201ENST00000381867 MT-ATP6P00846 226 aa12.77□□□□□ -0.37
SNPH-201ENST00000381867 P2RX1P51575 399 aa12.77□□□□□ -0.37
SNPH-201ENST00000381867 PAQR6Q6TCH4 344 aa12.77□□□□□ -0.37
SNPH-201ENST00000381867 NKAIN4Q8IVV8 208 aa12.77□□□□□ -0.37
SNPH-201ENST00000381867 ZNF561Q8N587 486 aa12.77□□□□□ -0.37
SNPH-201ENST00000381867 ASB13Q8WXK3 278 aa12.77□□□□□ -0.37
SNPH-201ENST00000381867 VPS25Q9BRG1 176 aa12.77□□□□□ -0.37
SNPH-201ENST00000381867 SPNS1Q9H2V7 528 aa12.77□□□□□ -0.37
SNPH-201ENST00000381867 RYDENQ9NUL5 291 aaKnown RBP12.77□□□□□ -0.37
SNPH-201ENST00000381867 GFYI3L273 518 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 MGMTP16455 207 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 SSR4P51571 173 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 OR2B8PP59922 312 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 C17orf67Q0P5P2 114 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.76□□□□□ -0.37
SNPH-201ENST00000381867 DHRS4L2Q6PKH6 230 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 FGF14Q92915 247 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 Q96M85 177 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 LRFN5Q96NI6 719 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 OPALINQ96PE5 141 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 STACQ99469 402 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 FGF22Q9HCT0 170 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 PRELID3BQ9Y3B1 194 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 XRCC3O43542 346 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 ABHD17CQ6PCB6 329 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 OLIG3Q7RTU3 272 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 KMT5CQ86Y97 462 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 KCND3Q9UK17 655 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 SCO1O75880 301 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 PDGFBP01127 241 aaPredicted RBP12.76□□□□□ -0.37
SNPH-201ENST00000381867 EIF4EP06730 217 aaKnown RBP12.76□□□□□ -0.37
SNPH-201ENST00000381867 ALOX5APP20292 161 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 OR8G2PQ6IF36 304 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 VHLLQ6RSH7 139 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 FAM185AQ8N0U4 392 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 RELL2Q8NC24 303 aaPredicted RBP12.76□□□□□ -0.37
SNPH-201ENST00000381867 SEMA4CQ9C0C4 833 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 TAS2R4Q9NYW5 299 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 FCGR2CP31995 323 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 H3F3AP84243 136 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 ARHGAP11BQ3KRB8 267 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 LIPNQ5VXI9 398 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 TMEM64Q6YI46 380 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 RIMKLAQ8IXN7 391 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 CLRN3Q8NCR9 226 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 CADM4Q8NFZ8 388 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 MED18Q9BUE0 208 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 MBNL1Q9NR56 388 aaKnown RBP12.76□□□□□ -0.37
SNPH-201ENST00000381867 PIGLQ9Y2B2 252 aa12.76□□□□□ -0.37
SNPH-201ENST00000381867 NPPBP16860 134 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 HAGHQ16775 308 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 PRAMEF20Q5VT98 475 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 BTNL8Q6UX41 500 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 SLC35G3Q8N808 338 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 SLC16A11Q8NCK7 471 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 SUCNR1Q9BXA5 334 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 FAM234AQ9H0X4 552 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 PADI1Q9ULC6 663 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 PPIL1Q9Y3C6 166 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 OR10J4P0C629 311 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 ZNF750Q32MQ0 723 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 TMEM196Q5HYL7 178 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 ACSM5Q6NUN0 579 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 ANGPTL6Q8NI99 470 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 ZNF707Q96C28 371 aaPredicted RBP12.75□□□□□ -0.37
SNPH-201ENST00000381867 PDXPQ96GD0 296 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 BCO1Q9HAY6 547 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 HINT3Q9NQE9 182 aaKnown RBP12.75□□□□□ -0.37
SNPH-201ENST00000381867 CMC2Q9NRP2 79 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 ARNTP27540 789 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 CSNK1G2P78368 415 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 FCRL6Q6DN72 434 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 DOK3Q7L591 496 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 ANKRD53Q8N9V6 530 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 OR51A2Q8NGJ7 313 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 UCN3Q969E3 161 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 TEX101Q9BY14 249 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 TM7SF3Q9NS93 570 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 FGF21Q9NSA1 209 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 POLR2AP24928 1970 aaKnown RBP12.75□□□□□ -0.37
SNPH-201ENST00000381867 KIR2DS1A0A191URI9 304 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 KIR2DS4P43632 304 aa12.75□□□□□ -0.37
SNPH-201ENST00000381867 AQP6Q13520 282 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms