RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 TRAT1Q6PIZ9 186 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 Q6ZVL8 140 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 GCNT2Q8N0V5 402 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 OR52P1PQ8NH57 321 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 VAMP8Q9BV40 100 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 NMNAT2Q9BZQ4 307 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 CSNK1G1Q9HCP0 422 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 FZD3Q9NPG1 666 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 UBE2J1Q9Y385 318 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-203ENST00000381196 CASP8AP2Q9UKL3 1982 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 NLRC5Q86WI3 1866 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 CSF2P04141 144 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 CST5P28325 142 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-203ENST00000381196 ID2Q02363 134 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 SRSF4Q08170 494 aaKnown RBP4.48□□□□□ -1.69
PTPRD-203ENST00000381196 IHHQ14623 411 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 HLA-BQ31612 363 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.48□□□□□ -1.69
PTPRD-203ENST00000381196 MRPL54Q6P161 138 aaKnown RBP4.48□□□□□ -1.69
PTPRD-203ENST00000381196 Q6ZSR6 202 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 ABI3BPQ7Z7G0 1075 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 TP53I13Q8NBR0 393 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-203ENST00000381196 LCORQ96JN0 433 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-203ENST00000381196 TEPSINQ96N21 525 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 BET1LQ9NYM9 111 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 BRWD3Q6RI45 1802 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 SAP18O00422 153 aaKnown RBP4.47□□□□□ -1.69
PTPRD-203ENST00000381196 AKR7A2O43488 359 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 PLPP2O43688 288 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 MMP23AO75900 390 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 SIX3O95343 332 aaPredicted RBP4.47□□□□□ -1.69
PTPRD-203ENST00000381196 RPL29P47914 159 aaKnown RBP4.47□□□□□ -1.69
PTPRD-203ENST00000381196 NKX2-5P52952 324 aaPredicted RBP4.47□□□□□ -1.69
PTPRD-203ENST00000381196 ZNF92Q03936 586 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 C21orf62-AS1Q17RA5 79 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 HSF5Q4G112 596 aaPredicted RBP4.47□□□□□ -1.69
PTPRD-203ENST00000381196 C11orf87Q6NUJ2 197 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 C17orf107Q6ZR85 190 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 SNX29P2Q8IUI4 249 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 VN1R2Q8NFZ6 395 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 OR52H1Q8NGJ2 320 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 ZNF516Q92618 1163 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 HAS2Q92819 552 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 SLCO4A1Q96BD0 722 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 MRPS24Q96EL2 167 aaKnown RBP4.47□□□□□ -1.69
PTPRD-203ENST00000381196 MCHR1Q99705 422 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 TAS2R16Q9NYV7 291 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 KIAA1456Q9P272 454 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 PLAGL1Q9UM63 463 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 KMT2EQ8IZD2 1858 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 A0A087WUU8 490 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 C4orf47A7E2U8 309 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 A8MVM7 634 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 M0R296 226 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 NUDT3O95989 172 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 SRMP19623 302 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 DAPP51397 102 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 FAM3AP98173 230 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 RPE65Q16518 533 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 TMEM241Q24JQ0 296 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 OR7E24Q6IFN5 339 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 SDR9C7Q8NEX9 313 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 ZNF2Q9BSG1 426 aaPredicted RBP4.47□□□□□ -1.69
PTPRD-203ENST00000381196 SLC2A8Q9NY64 477 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 NOTCH2Q04721 2471 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 H3BNC9 293 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 BCHEP06276 602 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 PGCP20142 388 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 AADACP22760 399 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 DDTP30046 118 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 KCNJ10P78508 379 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 SRSF5Q13243 272 aaKnown RBP4.47□□□□□ -1.69
PTPRD-203ENST00000381196 PLGLAQ15195 96 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 CDKN3Q16667 212 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 ACSM3Q53FZ2 586 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 SYPL2Q5VXT5 272 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 TMEM225Q6GV28 225 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 C19orf48Q6RUI8 117 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 VTCN1Q7Z7D3 282 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 ABHD1Q96SE0 405 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 SMOQ99835 787 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 PCGF1Q9BSM1 259 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 NAA50Q9GZZ1 169 aaKnown RBP4.47□□□□□ -1.69
PTPRD-203ENST00000381196 RABAC1Q9UI14 185 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 NPIPB15A6NHN6 443 aaPredicted RBP4.47□□□□□ -1.69
PTPRD-203ENST00000381196 IFITM5A6NNB3 132 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 H7BYZ3 331 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 K7ERQ8 282 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 SOX1O00570 391 aaPredicted RBP4.47□□□□□ -1.69
PTPRD-203ENST00000381196 ST8SIA3O43173 380 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 PDE6DO43924 150 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 PTH2RP49190 550 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 UBE2G2P60604 165 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 SMUG1Q53HV7 270 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 NADSYN1Q6IA69 706 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 NXPE4Q6UWF7 544 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 NLRC3Q7RTR2 1065 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 CATSPERDQ86XM0 798 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 PRR22Q8IZ63 422 aa4.47□□□□□ -1.69
PTPRD-203ENST00000381196 RLN3Q8WXF3 142 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms