RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 AQP6Q13520 282 aa16.75■□□□□ 0.27
GTF3A-201ENST00000381140 MAD2L1BPQ15013 274 aaPredicted RBP16.75■□□□□ 0.27
GTF3A-201ENST00000381140 CORO6Q6QEF8 472 aa16.75■□□□□ 0.27
GTF3A-201ENST00000381140 SYT9Q86SS6 491 aa16.75■□□□□ 0.27
GTF3A-201ENST00000381140 LINC00346Q8IVM7 164 aa16.75■□□□□ 0.27
GTF3A-201ENST00000381140 NUP37Q8NFH4 326 aa16.75■□□□□ 0.27
GTF3A-201ENST00000381140 FAM81AQ8TBF8 368 aa16.75■□□□□ 0.27
GTF3A-201ENST00000381140 ZNRF4Q8WWF5 429 aa16.75■□□□□ 0.27
GTF3A-201ENST00000381140 FOXC2Q99958 501 aa16.75■□□□□ 0.27
GTF3A-201ENST00000381140 TEX12Q9BXU0 123 aa16.75■□□□□ 0.27
GTF3A-201ENST00000381140 CBLN4Q9NTU7 201 aa16.75■□□□□ 0.27
GTF3A-201ENST00000381140 C5orf49A4QMS7 147 aa16.74■□□□□ 0.27
GTF3A-201ENST00000381140 GPRIN2O60269 458 aa16.74■□□□□ 0.27
GTF3A-201ENST00000381140 HMGN1P05114 100 aa16.74■□□□□ 0.27
GTF3A-201ENST00000381140 RPSAP08865 295 aaKnown RBP16.74■□□□□ 0.27
GTF3A-201ENST00000381140 OR4A8P0C604 315 aa16.74■□□□□ 0.27
GTF3A-201ENST00000381140 SPI1P17947 270 aa16.74■□□□□ 0.27
GTF3A-201ENST00000381140 PAICSP22234 425 aaKnown RBP16.74■□□□□ 0.27
GTF3A-201ENST00000381140 SERPINF1P36955 418 aa16.74■□□□□ 0.27
GTF3A-201ENST00000381140 HTR5AP47898 357 aa16.74■□□□□ 0.27
GTF3A-201ENST00000381140 PTH2RP49190 550 aa16.74■□□□□ 0.27
GTF3A-201ENST00000381140 ADIPOQQ15848 244 aa16.74■□□□□ 0.27
GTF3A-201ENST00000381140 KCNMB1Q16558 191 aa16.74■□□□□ 0.27
GTF3A-201ENST00000381140 LYPD4Q6UWN0 246 aa16.74■□□□□ 0.27
GTF3A-201ENST00000381140 DTX2Q86UW9 622 aa16.74■□□□□ 0.27
GTF3A-201ENST00000381140 ENTHD1Q8IYW4 607 aa16.74■□□□□ 0.27
GTF3A-201ENST00000381140 OR6K6Q8NGW6 343 aa16.74■□□□□ 0.27
GTF3A-201ENST00000381140 IGFBPL1Q8WX77 278 aa16.74■□□□□ 0.27
GTF3A-201ENST00000381140 CDADC1Q9BWV3 514 aa16.74■□□□□ 0.27
GTF3A-201ENST00000381140 HCAR1Q9BXC0 346 aa16.74■□□□□ 0.27
GTF3A-201ENST00000381140 YTHDF1Q9BYJ9 559 aaKnown RBP16.74■□□□□ 0.27
GTF3A-201ENST00000381140 PRRG3Q9BZD7 231 aa16.74■□□□□ 0.27
GTF3A-201ENST00000381140 IMPAD1Q9NX62 359 aa16.74■□□□□ 0.27
GTF3A-201ENST00000381140 PLEK2Q9NYT0 353 aa16.74■□□□□ 0.27
GTF3A-201ENST00000381140 FZR1Q9UM11 496 aa16.74■□□□□ 0.27
GTF3A-201ENST00000381140 LHFPL6Q9Y693 200 aa16.74■□□□□ 0.27
GTF3A-201ENST00000381140 LOC100509620A0A075B734 347 aa16.73■□□□□ 0.27
GTF3A-201ENST00000381140 VSTM5A8MXK1 200 aa16.73■□□□□ 0.27
GTF3A-201ENST00000381140 RER1O15258 196 aa16.73■□□□□ 0.27
GTF3A-201ENST00000381140 SURF4O15260 269 aa16.73■□□□□ 0.27
GTF3A-201ENST00000381140 MPZL2O60487 215 aa16.73■□□□□ 0.27
GTF3A-201ENST00000381140 TNFAIP8O95379 198 aa16.73■□□□□ 0.27
GTF3A-201ENST00000381140 ZNF823P16415 610 aa16.73■□□□□ 0.27
GTF3A-201ENST00000381140 GABRB1P18505 474 aa16.73■□□□□ 0.27
GTF3A-201ENST00000381140 SLC25A1P53007 311 aa16.73■□□□□ 0.27
GTF3A-201ENST00000381140 NKX6-1P78426 367 aaPredicted RBP16.73■□□□□ 0.27
GTF3A-201ENST00000381140 PLBD1Q6P4A8 553 aa16.73■□□□□ 0.27
GTF3A-201ENST00000381140 TMEM154Q6P9G4 183 aa16.73■□□□□ 0.27
GTF3A-201ENST00000381140 RHOXF1Q8NHV9 184 aa16.73■□□□□ 0.27
GTF3A-201ENST00000381140 TRUB1Q8WWH5 349 aaKnown RBP16.73■□□□□ 0.27
GTF3A-201ENST00000381140 WACQ9BTA9 647 aa16.73■□□□□ 0.27
GTF3A-201ENST00000381140 CACNG6Q9BXT2 260 aa16.73■□□□□ 0.27
GTF3A-201ENST00000381140 ZNF696Q9H7X3 374 aa16.73■□□□□ 0.27
GTF3A-201ENST00000381140 MRPL22Q9NWU5 206 aaKnown RBP16.73■□□□□ 0.27
GTF3A-201ENST00000381140 TVP23BQ9NYZ1 205 aa16.73■□□□□ 0.27
GTF3A-201ENST00000381140 MAGEA13PA6NCF6 341 aa16.72■□□□□ 0.27
GTF3A-201ENST00000381140 PRR23D1E9PI22 279 aaPredicted RBP16.72■□□□□ 0.27
GTF3A-201ENST00000381140 LCKP06239 509 aa16.72■□□□□ 0.27
GTF3A-201ENST00000381140 LYNP07948 512 aa16.72■□□□□ 0.27
GTF3A-201ENST00000381140 PRR23D2P0DMB1 279 aaPredicted RBP16.72■□□□□ 0.27
GTF3A-201ENST00000381140 RPS27P42677 84 aaKnown RBP16.72■□□□□ 0.27
GTF3A-201ENST00000381140 ATP5J2P56134 94 aa16.72■□□□□ 0.27
GTF3A-201ENST00000381140 ADAM8P78325 824 aa16.72■□□□□ 0.27
GTF3A-201ENST00000381140 CDK5R2Q13319 367 aa16.72■□□□□ 0.27
GTF3A-201ENST00000381140 SNAPC1Q16533 368 aa16.72■□□□□ 0.27
GTF3A-201ENST00000381140 VASH1Q7L8A9 365 aaPredicted RBP16.72■□□□□ 0.27
GTF3A-201ENST00000381140 ZNF511Q8NB15 262 aa16.72■□□□□ 0.27
GTF3A-201ENST00000381140 OR2AJ1Q8NGZ0 328 aa16.72■□□□□ 0.27
GTF3A-201ENST00000381140 POM121L2Q96KW2 1035 aa16.72■□□□□ 0.27
GTF3A-201ENST00000381140 NMNAT2Q9BZQ4 307 aa16.72■□□□□ 0.27
GTF3A-201ENST00000381140 OR51V1Q9H2C8 321 aa16.72■□□□□ 0.27
GTF3A-201ENST00000381140 ZNF442Q9H7R0 627 aa16.72■□□□□ 0.27
GTF3A-201ENST00000381140 EIF3KQ9UBQ5 218 aaKnown RBP16.72■□□□□ 0.27
GTF3A-201ENST00000381140 CMAHPQ9Y471 501 aa16.72■□□□□ 0.27
GTF3A-201ENST00000381140 CSMD1Q96PZ7 3565 aa16.71■□□□□ 0.27
GTF3A-201ENST00000381140 FMO3P31513 532 aa16.71■□□□□ 0.27
GTF3A-201ENST00000381140 CXCR4P61073 352 aa16.71■□□□□ 0.27
GTF3A-201ENST00000381140 RPS23P62266 143 aaKnown RBP16.71■□□□□ 0.27
GTF3A-201ENST00000381140 SNRPGP62308 76 aaKnown RBP16.71■□□□□ 0.27
GTF3A-201ENST00000381140 SNRPD2P62316 118 aaKnown RBP16.71■□□□□ 0.27
GTF3A-201ENST00000381140 KCTD21Q4G0X4 260 aa16.71■□□□□ 0.27
GTF3A-201ENST00000381140 KLHL12Q53G59 568 aa16.71■□□□□ 0.27
GTF3A-201ENST00000381140 CCDC92Q53HC0 331 aaPredicted RBP16.71■□□□□ 0.27
GTF3A-201ENST00000381140 RBM48Q5RL73 367 aaKnown RBP16.71■□□□□ 0.27
GTF3A-201ENST00000381140 C6orf141Q5SZD1 244 aa16.71■□□□□ 0.27
GTF3A-201ENST00000381140 C11orf71Q6IPW1 123 aa16.71■□□□□ 0.27
GTF3A-201ENST00000381140 LAIR2Q6ISS4 152 aa16.71■□□□□ 0.27
GTF3A-201ENST00000381140 CPOQ8IVL8 374 aa16.71■□□□□ 0.27
GTF3A-201ENST00000381140 ZNF786Q8N393 782 aa16.71■□□□□ 0.27
GTF3A-201ENST00000381140 GJC3Q8NFK1 279 aa16.71■□□□□ 0.27
GTF3A-201ENST00000381140 OR8J1Q8NGP2 316 aa16.71■□□□□ 0.27
GTF3A-201ENST00000381140 APH1BQ8WW43 257 aa16.71■□□□□ 0.27
GTF3A-201ENST00000381140 SLC7A6Q92536 515 aa16.71■□□□□ 0.27
GTF3A-201ENST00000381140 TRMT61AQ96FX7 289 aaKnown RBP16.71■□□□□ 0.27
GTF3A-201ENST00000381140 SYT3Q9BQG1 590 aa16.71■□□□□ 0.27
GTF3A-201ENST00000381140 PLK3Q9H4B4 646 aa16.71■□□□□ 0.27
GTF3A-201ENST00000381140 MYRFQ9Y2G1 1151 aa16.71■□□□□ 0.27
GTF3A-201ENST00000381140 M0R129 80 aa16.7■□□□□ 0.26
GTF3A-201ENST00000381140 OVOL3O00110 214 aa16.7■□□□□ 0.26
GTF3A-201ENST00000381140 WBP4O75554 376 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms