RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 NID1P14543 1247 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 PSMB6P28072 239 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 PAFAH1B3Q15102 231 aaKnown RBP9.9□□□□□ -0.82
CLCN4-202ENST00000380833 SLC16A14Q7RTX9 510 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 SERPINA11Q86U17 422 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 ZDHHC14Q8IZN3 488 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 FAM131CQ96AQ9 280 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 PRRC1Q96M27 445 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 SLC46A1Q96NT5 459 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 A0A1B0GTW7 788 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 ZNF729A6NN14 1252 aaPredicted RBP9.9□□□□□ -0.82
CLCN4-202ENST00000380833 ZNF354AO60765 605 aaPredicted RBP9.9□□□□□ -0.82
CLCN4-202ENST00000380833 WDR1O75083 606 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 LAMP1P11279 417 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 C21orf58P58505 322 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 ZNF92Q03936 586 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 PLA1AQ53H76 456 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 PAGE3Q5JUK9 113 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 UBE3DQ7Z6J8 389 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 MISPQ8IVT2 679 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 ZFP62Q8NB50 900 aaPredicted RBP9.9□□□□□ -0.82
CLCN4-202ENST00000380833 APH1AQ96BI3 265 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 SLC6A18Q96N87 628 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 ULBP2Q9BZM5 246 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 ELF5Q9UKW6 265 aaPredicted RBP9.9□□□□□ -0.82
CLCN4-202ENST00000380833 NRG2O14511 850 aaPredicted RBP9.9□□□□□ -0.82
CLCN4-202ENST00000380833 FUT1P19526 365 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 BSGP35613 385 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 KCNAB1Q14722 419 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 HENMT1Q5T8I9 393 aaKnown RBP9.9□□□□□ -0.82
CLCN4-202ENST00000380833 TRMT61AQ96FX7 289 aaKnown RBP9.9□□□□□ -0.82
CLCN4-202ENST00000380833 OR10A2Q9H208 303 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 GNG12Q9UBI6 72 aa9.9□□□□□ -0.82
CLCN4-202ENST00000380833 CDRT15L2A8MXV6 281 aa9.9□□□□□ -0.83
CLCN4-202ENST00000380833 H3BVH4 76 aa9.9□□□□□ -0.83
CLCN4-202ENST00000380833 CTSAP10619 480 aa9.9□□□□□ -0.83
CLCN4-202ENST00000380833 MPEG1Q2M385 716 aa9.9□□□□□ -0.83
CLCN4-202ENST00000380833 MAMSTRQ6ZN01 415 aa9.9□□□□□ -0.83
CLCN4-202ENST00000380833 ESPNLQ6ZVH7 1005 aa9.9□□□□□ -0.83
CLCN4-202ENST00000380833 COMMD6Q7Z4G1 85 aa9.9□□□□□ -0.83
CLCN4-202ENST00000380833 ZNF485Q8NCK3 441 aa9.9□□□□□ -0.83
CLCN4-202ENST00000380833 OR51F2Q8NH61 342 aa9.9□□□□□ -0.83
CLCN4-202ENST00000380833 ISL2Q96A47 359 aa9.9□□□□□ -0.83
CLCN4-202ENST00000380833 TBX15Q96SF7 602 aa9.9□□□□□ -0.83
CLCN4-202ENST00000380833 NKX3-1Q99801 234 aaPredicted RBP9.9□□□□□ -0.83
CLCN4-202ENST00000380833 PLK3Q9H4B4 646 aa9.9□□□□□ -0.83
CLCN4-202ENST00000380833 POPDC3Q9HBV1 291 aa9.9□□□□□ -0.83
CLCN4-202ENST00000380833 PRKRAO75569 313 aaKnown RBP9.9□□□□□ -0.83
CLCN4-202ENST00000380833 ERVPABLB-1P60509 514 aa9.9□□□□□ -0.83
CLCN4-202ENST00000380833 TGFBR3Q03167 851 aa9.9□□□□□ -0.83
CLCN4-202ENST00000380833 ABHD6Q9BV23 337 aa9.9□□□□□ -0.83
CLCN4-202ENST00000380833 ATP23Q9Y6H3 246 aa9.9□□□□□ -0.83
CLCN4-202ENST00000380833 BCL6P41182 706 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 ECI1P42126 302 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 KIR2DL3P43628 341 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 CLEC12BQ2HXU8 276 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 ZADH2Q8N4Q0 377 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 ZDHHC16Q969W1 377 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 SNX22Q96L94 193 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 NPY6RQ99463 290 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 SLC35B3Q9H1N7 401 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 RNF150Q9ULK6 438 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 TRDV1A0A1B0GX56 115 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 FBLL1A6NHQ2 334 aaKnown RBP9.89□□□□□ -0.83
CLCN4-202ENST00000380833 SERPINE3A8MV23 424 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 CTBSQ01459 385 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 DUSP2Q05923 314 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 INCA1Q0VD86 236 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 ANKRD9Q96BM1 317 aaPredicted RBP9.89□□□□□ -0.83
CLCN4-202ENST00000380833 RPUSD4Q96CM3 377 aaKnown RBP9.89□□□□□ -0.83
CLCN4-202ENST00000380833 ST6GAL2Q96JF0 529 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 C4orf36Q96KX1 117 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 OPN4Q9UHM6 478 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 AFDNP55196 1824 aaKnown RBP9.89□□□□□ -0.83
CLCN4-202ENST00000380833 A0A087WV62 115 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 FAM183AA6NL82 134 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 GABARAPH6UMI1 98 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 HSD17B6O14756 317 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 AESQ08117 197 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 LYPD8Q6UX82 237 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 VASH2Q86V25 355 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 VRK2Q86Y07 508 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 CDC20BQ86Y33 519 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 SLC26A10Q8NG04 563 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 OR8J2Q8NGG1 315 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 OR13C8Q8NGS7 320 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 NAGKQ9UJ70 344 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 FCGR2CP31995 323 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 GJA4P35212 333 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 SLC10A2Q12908 348 aaPredicted RBP9.89□□□□□ -0.83
CLCN4-202ENST00000380833 RPL7L1Q6DKI1 246 aaKnown RBP9.89□□□□□ -0.83
CLCN4-202ENST00000380833 BPIFA4PQ86YQ2 179 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 OR5AU1Q8NGC0 362 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 OR52L2PQ8NGH6 319 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 DUSP23Q9BVJ7 150 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 UQCC1Q9NVA1 299 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 MTCH1Q9NZJ7 389 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 KIAA1210Q9ULL0 1709 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 OPN1MWP04001 364 aa9.89□□□□□ -0.83
CLCN4-202ENST00000380833 OPN1MW2P0DN77 364 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms