RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 APOBEC1P41238 236 aaKnown RBP11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 FASLGP48023 281 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 CXCL12P48061 93 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 AFF3P51826 1226 aaKnown RBP11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 RABEPKQ7Z6M1 372 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 CDH26Q8IXH8 852 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 MKXQ8IYA7 352 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 OR4D9Q8NGE8 314 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 ST8SIA2Q92186 375 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 CCDC74AQ96AQ1 378 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 NKX6-2Q9C056 277 aaPredicted RBP11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 MED29Q9NX70 200 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 ASH2LQ9UBL3 628 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 MTFP1Q9UDX5 166 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 ZNF629Q9UEG4 869 aaPredicted RBP11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 CAPZBP47756 277 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 HTR5AP47898 357 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 SLC25A1P53007 311 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 OR1D5P58170 312 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 SNRPNP63162 240 aaKnown RBP11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 PRICKLE4Q2TBC4 344 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 CDONQ4KMG0 1287 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 OTOSQ8NHW6 89 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 KTI12Q96EK9 354 aaPredicted RBP11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 STRADBQ9C0K7 418 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 CHST11Q9NPF2 352 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 HAO2Q9NYQ3 351 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 KLF15Q9UIH9 416 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 TRIOBPQ9H2D6 2365 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 CCDC163A0A0D9SF12 145 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 A0A1W2PPV9 198 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 BCAT2O15382 392 aaPredicted RBP11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 DCDP81605 110 aaKnown RBP11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 ZNF85Q03923 595 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 ZNF674Q2M3X9 581 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 MOB3CQ70IA8 216 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 SFTPA1Q8IWL2 248 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 SLC25A31Q9H0C2 315 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 FOXJ3Q9UPW0 622 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 B3GALT5Q9Y2C3 310 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 R4GMQ9 66 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 PLXNB2O15031 1838 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 LTBP1Q14766 1721 aa11.53□□□□□ -0.56
DNMT3A-204ENST00000380756 SGCEO43556 437 aa11.52□□□□□ -0.56
DNMT3A-204ENST00000380756 OMGP23515 440 aa11.52□□□□□ -0.56
DNMT3A-204ENST00000380756 DPP4P27487 766 aa11.52□□□□□ -0.56
DNMT3A-204ENST00000380756 GFERP55789 205 aa11.52□□□□□ -0.56
DNMT3A-204ENST00000380756 RPS18P62269 152 aaKnown RBP11.52□□□□□ -0.56
DNMT3A-204ENST00000380756 SSBP1Q04837 148 aaKnown RBP11.52□□□□□ -0.56
DNMT3A-204ENST00000380756 ELFN2Q5R3F8 820 aa11.52□□□□□ -0.56
DNMT3A-204ENST00000380756 AVPI1Q5T686 147 aa11.52□□□□□ -0.56
DNMT3A-204ENST00000380756 HSD17B11Q8NBQ5 300 aa11.52□□□□□ -0.56
DNMT3A-204ENST00000380756 ZNF707Q96C28 371 aaPredicted RBP11.52□□□□□ -0.56
DNMT3A-204ENST00000380756 TDRD15B5MCY1 1934 aaKnown RBP11.52□□□□□ -0.56
DNMT3A-204ENST00000380756 PRAMEF25A6NGN4 478 aa11.52□□□□□ -0.56
DNMT3A-204ENST00000380756 GREM1O60565 184 aa11.52□□□□□ -0.56
DNMT3A-204ENST00000380756 CD79AP11912 226 aa11.52□□□□□ -0.56
DNMT3A-204ENST00000380756 CD27P26842 260 aa11.52□□□□□ -0.56
DNMT3A-204ENST00000380756 CHATP28329 748 aa11.52□□□□□ -0.56
DNMT3A-204ENST00000380756 EIF1P41567 113 aaKnown RBP11.52□□□□□ -0.56
DNMT3A-204ENST00000380756 TCTN1Q2MV58 587 aa11.52□□□□□ -0.56
DNMT3A-204ENST00000380756 KCNRGQ8N5I3 272 aa11.52□□□□□ -0.56
DNMT3A-204ENST00000380756 GJC3Q8NFK1 279 aa11.52□□□□□ -0.56
DNMT3A-204ENST00000380756 IMPA2O14732 288 aa11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 CT62P0C5K7 136 aa11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 ZNF728P0DKX0 622 aa11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 PI3P19957 117 aa11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 MSX1P28360 303 aa11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 PRR18Q8N4B5 295 aa11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 TEX19Q8NA77 164 aa11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 FAM213BQ8TBF2 198 aa11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 NAT6Q93015 286 aa11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 C4orf45Q96LM5 186 aa11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 OR6C1Q96RD1 312 aa11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 TCEAL7Q9BRU2 100 aa11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 KCNIP1Q9NZI2 227 aa11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 PUS1Q9Y606 427 aaKnown RBP eCLIP11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 NSG1A0A0A6YYJ2 146 aa11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 RPS10-NUDT3A0A1W2PQS6 291 aa11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 STMND1H3BQB6 276 aa11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 HRH1P35367 487 aa11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 RPS10P46783 165 aaKnown RBP11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 PCBD1P61457 104 aa11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 UBE2IP63279 158 aaKnown RBP11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 NKAIN1Q4KMZ8 207 aa11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 SLC16A14Q7RTX9 510 aa11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 BAP18Q8IXM2 172 aa11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 DUSP23Q9BVJ7 150 aa11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 TINAGL1Q9GZM7 467 aaPredicted RBP11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 AHCTF1Q8WYP5 2266 aa11.52□□□□□ -0.57
DNMT3A-204ENST00000380756 A0A1B0GTH9 108 aa11.51□□□□□ -0.57
DNMT3A-204ENST00000380756 G3V3Y1 287 aa11.51□□□□□ -0.57
DNMT3A-204ENST00000380756 FOLR3P41439 243 aa11.51□□□□□ -0.57
DNMT3A-204ENST00000380756 CDKN2AP42771 156 aaKnown RBP11.51□□□□□ -0.57
DNMT3A-204ENST00000380756 ALDH3B1P43353 468 aa11.51□□□□□ -0.57
DNMT3A-204ENST00000380756 LIMS1P48059 325 aa11.51□□□□□ -0.57
DNMT3A-204ENST00000380756 RIN1Q13671 783 aa11.51□□□□□ -0.57
DNMT3A-204ENST00000380756 WDR38Q5JTN6 314 aa11.51□□□□□ -0.57
DNMT3A-204ENST00000380756 ABHD17BQ5VST6 288 aa11.51□□□□□ -0.57
DNMT3A-204ENST00000380756 C9orf62Q8N4C0 152 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms