RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 APOBEC3AP31941 199 aaPredicted RBP11.94□□□□□ -0.5
PRPF18-202ENST00000378572 MTNR1AP48039 350 aa11.94□□□□□ -0.5
PRPF18-202ENST00000378572 EFNA4P52798 201 aa11.94□□□□□ -0.5
PRPF18-202ENST00000378572 RAB40BQ12829 278 aa11.94□□□□□ -0.5
PRPF18-202ENST00000378572 BLMHQ13867 455 aa11.94□□□□□ -0.5
PRPF18-202ENST00000378572 GGTLC2Q14390 218 aa11.94□□□□□ -0.5
PRPF18-202ENST00000378572 TMEM154Q6P9G4 183 aa11.94□□□□□ -0.5
PRPF18-202ENST00000378572 CREB3L2Q70SY1 520 aa11.94□□□□□ -0.5
PRPF18-202ENST00000378572 AHSA2Q719I0 299 aa11.94□□□□□ -0.5
PRPF18-202ENST00000378572 POMGNT2Q8NAT1 580 aa11.94□□□□□ -0.5
PRPF18-202ENST00000378572 BBS1Q8NFJ9 593 aa11.94□□□□□ -0.5
PRPF18-202ENST00000378572 OR6X1Q8NH79 312 aa11.94□□□□□ -0.5
PRPF18-202ENST00000378572 TMEM45BQ96B21 275 aa11.94□□□□□ -0.5
PRPF18-202ENST00000378572 ZNF385AQ96PM9 386 aaKnown RBP11.94□□□□□ -0.5
PRPF18-202ENST00000378572 ALKBH3Q96Q83 286 aaPredicted RBP11.94□□□□□ -0.5
PRPF18-202ENST00000378572 COPS4Q9BT78 406 aa11.94□□□□□ -0.5
PRPF18-202ENST00000378572 HCAR1Q9BXC0 346 aa11.94□□□□□ -0.5
PRPF18-202ENST00000378572 PCDHGB1Q9Y5G3 927 aa11.94□□□□□ -0.5
PRPF18-202ENST00000378572 MXRA5Q9NR99 2828 aa11.93□□□□□ -0.5
PRPF18-202ENST00000378572 CCDC182A6NF36 153 aa11.93□□□□□ -0.5
PRPF18-202ENST00000378572 AKAP8O43823 692 aaKnown RBP11.93□□□□□ -0.5
PRPF18-202ENST00000378572 HTR1AP08908 422 aa11.93□□□□□ -0.5
PRPF18-202ENST00000378572 SPI1P17947 270 aa11.93□□□□□ -0.5
PRPF18-202ENST00000378572 CENPAP49450 140 aa11.93□□□□□ -0.5
PRPF18-202ENST00000378572 CDH15P55291 814 aa11.93□□□□□ -0.5
PRPF18-202ENST00000378572 LOXL1Q08397 574 aaPredicted RBP11.93□□□□□ -0.5
PRPF18-202ENST00000378572 POU4F2Q12837 409 aa11.93□□□□□ -0.5
PRPF18-202ENST00000378572 MELKQ14680 651 aa11.93□□□□□ -0.5
PRPF18-202ENST00000378572 LCN1P1Q5VSP4 162 aa11.93□□□□□ -0.5
PRPF18-202ENST00000378572 CYB5R2Q6BCY4 276 aa11.93□□□□□ -0.5
PRPF18-202ENST00000378572 VHLLQ6RSH7 139 aa11.93□□□□□ -0.5
PRPF18-202ENST00000378572 PHC2Q8IXK0 858 aa11.93□□□□□ -0.5
PRPF18-202ENST00000378572 OR2T4Q8NH00 348 aa11.93□□□□□ -0.5
PRPF18-202ENST00000378572 FNDC8Q8TC99 324 aa11.93□□□□□ -0.5
PRPF18-202ENST00000378572 SLC25A44Q96H78 314 aaPredicted RBP11.93□□□□□ -0.5
PRPF18-202ENST00000378572 TXNDC15Q96J42 360 aa11.93□□□□□ -0.5
PRPF18-202ENST00000378572 TEAD3Q99594 435 aa11.93□□□□□ -0.5
PRPF18-202ENST00000378572 VRK1Q99986 396 aaPredicted RBP11.93□□□□□ -0.5
PRPF18-202ENST00000378572 PIMREGQ9BSJ6 248 aa11.93□□□□□ -0.5
PRPF18-202ENST00000378572 MRPL13Q9BYD1 178 aaKnown RBP11.93□□□□□ -0.5
PRPF18-202ENST00000378572 SHARPINQ9H0F6 387 aa11.93□□□□□ -0.5
PRPF18-202ENST00000378572 MED20Q9H944 212 aa11.93□□□□□ -0.5
PRPF18-202ENST00000378572 CHODLQ9H9P2 273 aa11.93□□□□□ -0.5
PRPF18-202ENST00000378572 FGF20Q9NP95 211 aaPredicted RBP11.93□□□□□ -0.5
PRPF18-202ENST00000378572 MED29Q9NX70 200 aa11.93□□□□□ -0.5
PRPF18-202ENST00000378572 EXOGQ9Y2C4 368 aaKnown RBP11.93□□□□□ -0.5
PRPF18-202ENST00000378572 STAB1Q9NY15 2570 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 SLC22A23A1A5C7 686 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 PHF1O43189 567 aaPredicted RBP11.92□□□□□ -0.5
PRPF18-202ENST00000378572 TRMUO75648 421 aaKnown RBP11.92□□□□□ -0.5
PRPF18-202ENST00000378572 GLCEO94923 617 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 CLPTM1O96005 669 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 FAM157CP0CG43 387 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 NR2C1P13056 603 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 USF1P22415 310 aaPredicted RBP11.92□□□□□ -0.5
PRPF18-202ENST00000378572 PDLIM4P50479 330 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 BIDP55957 195 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 ST3GAL4Q11206 333 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 KLHL12Q53G59 568 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 RNLSQ5VYX0 342 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 ZBTB46Q86UZ6 589 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 STX19Q8N4C7 294 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 SVOPQ8N4V2 548 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 OR9Q1Q8NGQ5 310 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 C10orf105Q8TEF2 133 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 SGCDQ92629 289 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 OTULINQ96BN8 352 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 LGALS12Q96DT0 336 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 RNFT2Q96EX2 444 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 RACGAP1Q9H0H5 632 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 SYT4Q9H2B2 425 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 OR51V1Q9H2C8 321 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 RPRD1BQ9NQG5 326 aaKnown RBP11.92□□□□□ -0.5
PRPF18-202ENST00000378572 RCE1Q9Y256 329 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 SNX5Q9Y5X3 404 aa11.92□□□□□ -0.5
PRPF18-202ENST00000378572 HEATR1Q9H583 2144 aaKnown RBP11.92□□□□□ -0.5
PRPF18-202ENST00000378572 SLC35F4A4IF30 521 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 ZNF726A6NNF4 738 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 IGHG1P01857 330 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 DCKP27707 260 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 CRABP1P29762 137 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 BLVRAP53004 296 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 TUBA1BP68363 451 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 MVKQ03426 396 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 RUNX1T1Q06455 604 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 TBRG1Q3YBR2 411 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 LINC01590Q5TEZ4 76 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 DNM1P34Q6PK57 102 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 TUBA1AQ71U36 451 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 SPARTQ8N0X7 666 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 ZIC4Q8N9L1 334 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 TMEM80Q96HE8 168 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 JAM3Q9BX67 310 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 CDCA4Q9BXL8 241 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 ERVK-18Q9QC07 812 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 LPAR3Q9UBY5 353 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 DIMT1Q9UNQ2 313 aaKnown RBP11.91□□□□□ -0.5
PRPF18-202ENST00000378572 A0A096LNT2 108 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 A0A096LPE4 126 aa11.91□□□□□ -0.5
PRPF18-202ENST00000378572 A0A1W2PPZ6 126 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms