RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 J3KRW8 73 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 GPR31O00270 319 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 CDX4O14627 284 aaPredicted RBP12.87□□□□□ -0.35
TRIM13-202ENST00000378182 C7P10643 843 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 SDHBP21912 280 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 RPL27P61353 136 aaKnown RBP12.87□□□□□ -0.35
TRIM13-202ENST00000378182 RAB35Q15286 201 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 TMEM52BQ4KMG9 183 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 SLC48A1Q6P1K1 146 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 ZC3H3Q8IXZ2 948 aaKnown RBP12.87□□□□□ -0.35
TRIM13-202ENST00000378182 SLC16A11Q8NCK7 471 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 OR52I1Q8NGK6 324 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 SFT2D1Q8WV19 159 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 LRP5LA4QPB2 252 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 SLC25A6P12236 298 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 SRMP19623 302 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 GUSBP11Q6P575 273 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 TFAP2EQ6VUC0 442 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 WSB2Q9NYS7 404 aaPredicted RBP12.87□□□□□ -0.35
TRIM13-202ENST00000378182 GFYI3L273 518 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 NDUFB3O43676 98 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 COX7A2P2O60397 106 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 ST6GAL1P15907 406 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 SRP9P49458 86 aaKnown RBP12.87□□□□□ -0.35
TRIM13-202ENST00000378182 LHFPL2Q6ZUX7 228 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 CBLL1Q75N03 491 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 HSD17B11Q8NBQ5 300 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 IP6K3Q96PC2 410 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 CCDC88CQ9P219 2028 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 TAPBPO15533 448 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 RBP2P50120 134 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 ZDHHC5Q9C0B5 715 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 SLX4Q8IY92 1834 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 TMEM41BQ5BJD5 291 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 NT5DC2Q9H857 520 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 ZNF346Q9UL40 294 aaKnown RBP12.87□□□□□ -0.35
TRIM13-202ENST00000378182 GAB2Q9UQC2 676 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 POLDIP2Q9Y2S7 368 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 FAM157AC9JC47 383 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 K7EQS6 105 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 CYTIPO60759 359 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 HPNP05981 417 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 ALDOCP09972 364 aaKnown RBP12.86□□□□□ -0.35
TRIM13-202ENST00000378182 IHHQ14623 411 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 C1orf210Q8IVY1 113 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 ADAMTS14Q8WXS8 1223 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 COMMD5Q9GZQ3 224 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 ADAM29Q9UKF5 820 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 GPR55Q9Y2T6 319 aaPredicted RBP12.86□□□□□ -0.35
TRIM13-202ENST00000378182 NUP205Q92621 2012 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 KLKB1P03952 638 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 LAP3P28838 519 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 ZDHHC23Q8IYP9 409 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 OR2AE1Q8NHA4 323 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 FAM3DQ96BQ1 224 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 OR52A5Q9H2C5 316 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 N4BP2Q86UW6 1770 aaPredicted RBP12.86□□□□□ -0.35
TRIM13-202ENST00000378182 RAB5CP51148 216 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 CCR6P51684 374 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 METRNLQ641Q3 311 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 F5H697 171 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 METTL15P1P0C7V9 234 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 SLCO4C1Q6ZQN7 724 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 DPF1Q92782 380 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 ZNF331Q9NQX6 463 aaPredicted RBP12.86□□□□□ -0.35
TRIM13-202ENST00000378182 NDRG4Q9ULP0 352 aaKnown RBP12.86□□□□□ -0.35
TRIM13-202ENST00000378182 CNTRLQ7Z7A1 2325 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 IGHV3-13P01766 116 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 IGHV3-7P01780 117 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 HLA-HP01893 362 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 RNF224P0DH78 156 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 FPR3P25089 353 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 G0S2P27469 103 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 NXNL2Q5VZ03 156 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 SMAP2Q8WU79 429 aaPredicted RBP12.86□□□□□ -0.35
TRIM13-202ENST00000378182 ZNF251Q9BRH9 671 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 RAB22AQ9UL26 194 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 CLDN24A6NM45 220 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 PRAF2O60831 178 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 NTF3P20783 257 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 ACKR3P25106 362 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 MPLP40238 635 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 PFN3P60673 137 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 GLCCI1Q86VQ1 547 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 CLDN22Q8N7P3 220 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 SLC35D1Q9NTN3 355 aa12.86□□□□□ -0.35
TRIM13-202ENST00000378182 XRCC2O43543 280 aa12.85□□□□□ -0.35
TRIM13-202ENST00000378182 MLLT11Q13015 90 aaPredicted RBP12.85□□□□□ -0.35
TRIM13-202ENST00000378182 TRIP6Q15654 476 aaKnown RBP12.85□□□□□ -0.35
TRIM13-202ENST00000378182 PRSS36Q5K4E3 855 aa12.85□□□□□ -0.35
TRIM13-202ENST00000378182 STEAP1BQ6NZ63 245 aa12.85□□□□□ -0.35
TRIM13-202ENST00000378182 ZNF573Q86YE8 665 aa12.85□□□□□ -0.35
TRIM13-202ENST00000378182 CMBLQ96DG6 245 aa12.85□□□□□ -0.35
TRIM13-202ENST00000378182 GORASP2Q9H8Y8 452 aa12.85□□□□□ -0.35
TRIM13-202ENST00000378182 CSNK1G1Q9HCP0 422 aa12.85□□□□□ -0.35
TRIM13-202ENST00000378182 MED9Q9NWA0 146 aa12.85□□□□□ -0.35
TRIM13-202ENST00000378182 USP3Q9Y6I4 520 aa12.85□□□□□ -0.35
TRIM13-202ENST00000378182 DEFB108AA8MXU0 73 aa12.85□□□□□ -0.35
TRIM13-202ENST00000378182 CYR61O00622 381 aa12.85□□□□□ -0.35
TRIM13-202ENST00000378182 OPRM1P35372 400 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms