RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 PDLIM3Q53GG5 364 aaPredicted RBP7.64□□□□□ -1.19
VPS36-201ENST00000378060 LILRA6Q6PI73 481 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 HIST2H3AQ71DI3 136 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 RHOUQ7L0Q8 258 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 MARCH3Q86UD3 253 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 PRR18Q8N4B5 295 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 HSD17B11Q8NBQ5 300 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 CLEC1AQ8NC01 280 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 OR13C8Q8NGS7 320 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 OR10Z1Q8NGY1 313 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 OR2G2Q8NGZ5 317 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 ANKRD9Q96BM1 317 aaPredicted RBP7.64□□□□□ -1.19
VPS36-201ENST00000378060 HHIPQ96QV1 700 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 ISG20L2Q9H9L3 353 aaKnown RBP7.64□□□□□ -1.19
VPS36-201ENST00000378060 BCO1Q9HAY6 547 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 SLC23A2Q9UGH3 650 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 CHRNA9Q9UGM1 479 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 OR51B4Q9Y5P0 310 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 ANAPC1Q9H1A4 1944 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 CEBPZOSA8MTT3 80 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 BET1O15155 118 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 IGHEP01854 428 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 OR4E1P0C645 316 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 LIMS3P0CW19 117 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 LIMS4P0CW20 117 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 C2orf76Q3KRA6 126 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 CDH26Q8IXH8 852 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 SECTM1Q8WVN6 248 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 RLN3Q8WXF3 142 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 EMG1Q92979 244 aaKnown RBP7.64□□□□□ -1.19
VPS36-201ENST00000378060 TAAR8Q969N4 342 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 SLC39A9Q9NUM3 307 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 TAS2R4Q9NYW5 299 aa7.64□□□□□ -1.19
VPS36-201ENST00000378060 ZNF223Q9UK11 482 aaPredicted RBP7.64□□□□□ -1.19
VPS36-201ENST00000378060 ZNF346Q9UL40 294 aaKnown RBP7.64□□□□□ -1.19
VPS36-201ENST00000378060 H7C1Q1 480 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 PLPP2O43688 288 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 SCRG1O75711 98 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 OMGP23515 440 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 GDF1P27539 372 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 PCBP3P57721 371 aaKnown RBP7.63□□□□□ -1.19
VPS36-201ENST00000378060 RPL18Q07020 188 aaKnown RBP7.63□□□□□ -1.19
VPS36-201ENST00000378060 HYAL1Q12794 435 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 SLC17A1Q14916 467 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 TOR2AQ5JU69 321 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 NLRC3Q7RTR2 1065 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 BCORP1Q8N888 145 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 AGBL5Q8NDL9 886 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 DUSP18Q8NEJ0 188 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 OR51A4Q8NGJ6 313 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 APH1BQ8WW43 257 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 RAB39BQ96DA2 213 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 PLA2G12AQ9BZM1 189 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 PLEKHA2Q9HB19 425 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 DHCR7Q9UBM7 475 aaKnown RBP7.63□□□□□ -1.19
VPS36-201ENST00000378060 ASCC3Q8N3C0 2202 aaKnown RBP7.63□□□□□ -1.19
VPS36-201ENST00000378060 TRBV5-3A0A0A0MS03 114 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 KIR2DS1A0A191URI9 304 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 TMEM235A6NFC5 223 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 ZNF705GA8MUZ8 300 aaPredicted RBP7.63□□□□□ -1.19
VPS36-201ENST00000378060 NPIPB8E9PQR5 432 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 ADAM10O14672 748 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 PPP1R2P9O14990 202 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 PHF1O43189 567 aaPredicted RBP7.63□□□□□ -1.19
VPS36-201ENST00000378060 MAGEB1P43366 347 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 KIR2DS4P43632 304 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 CXCL12P48061 93 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 RAE1P78406 368 aaKnown RBP7.63□□□□□ -1.19
VPS36-201ENST00000378060 KIR2DS1Q14954 304 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 AANATQ16613 207 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 RNLSQ5VYX0 342 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 OGFOD3Q6PK18 319 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 FJX1Q86VR8 437 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 OR13H1Q8NG92 308 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 OR51A2Q8NGJ7 313 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 ST8SIA1Q92185 356 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 MSI2Q96DH6 328 aaKnown RBP7.63□□□□□ -1.19
VPS36-201ENST00000378060 MVB12AQ96EY5 273 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 JAM3Q9BX67 310 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 S1PR5Q9H228 398 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 CHST11Q9NPF2 352 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 DNAJB11Q9UBS4 358 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 CSAG2Q9Y5P2 127 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 A0A1B0GX78 115 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 PRAMEF25A6NGN4 478 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 SLC17A2O00624 439 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 CCSO14618 274 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 DSCR3O14972 297 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 CD3DP04234 171 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 SCAND1P57086 179 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 MRPS34P82930 218 aaKnown RBP7.63□□□□□ -1.19
VPS36-201ENST00000378060 AADACL3Q5VUY0 350 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 GALNT16Q8N428 558 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 LRRC18Q8N456 261 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 ANKRD53Q8N9V6 530 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 OR13C5Q8NGS8 318 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 KIRREL1Q96J84 757 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 TEX101Q9BY14 249 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 TXNIPQ9H3M7 391 aa7.63□□□□□ -1.19
VPS36-201ENST00000378060 ZCCHC4Q9H5U6 513 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms