RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 ISPDA4D126 451 aa16.23■□□□□ 0.19
CBWD3-204ENST00000377349 SGCEO43556 437 aa16.23■□□□□ 0.19
CBWD3-204ENST00000377349 KHDRBS3O75525 346 aaKnown RBP16.23■□□□□ 0.19
CBWD3-204ENST00000377349 IGHV1-46P01743 117 aa16.23■□□□□ 0.19
CBWD3-204ENST00000377349 OMPP47874 163 aa16.23■□□□□ 0.19
CBWD3-204ENST00000377349 LIMS1P48059 325 aa16.23■□□□□ 0.19
CBWD3-204ENST00000377349 RPS6KA3P51812 740 aa16.23■□□□□ 0.19
CBWD3-204ENST00000377349 TEKQ02763 1124 aa16.23■□□□□ 0.19
CBWD3-204ENST00000377349 HFEQ30201 348 aa16.23■□□□□ 0.19
CBWD3-204ENST00000377349 SAMD4BQ5PRF9 694 aaKnown RBP16.23■□□□□ 0.19
CBWD3-204ENST00000377349 FOXL2NBQ6ZUU3 175 aa16.23■□□□□ 0.19
CBWD3-204ENST00000377349 FAM122BQ7Z309 247 aa16.23■□□□□ 0.19
CBWD3-204ENST00000377349 CCL17Q92583 94 aa16.23■□□□□ 0.19
CBWD3-204ENST00000377349 RAB39BQ96DA2 213 aa16.23■□□□□ 0.19
CBWD3-204ENST00000377349 PYURFQ96I23 114 aa16.23■□□□□ 0.19
CBWD3-204ENST00000377349 C7orf34Q96L11 122 aa16.23■□□□□ 0.19
CBWD3-204ENST00000377349 SLC6A7Q99884 636 aa16.23■□□□□ 0.19
CBWD3-204ENST00000377349 MSL2Q9HCI7 577 aa16.23■□□□□ 0.19
CBWD3-204ENST00000377349 ASH2LQ9UBL3 628 aa16.23■□□□□ 0.19
CBWD3-204ENST00000377349 OPN4Q9UHM6 478 aa16.23■□□□□ 0.19
CBWD3-204ENST00000377349 ARL2BPQ9Y2Y0 163 aa16.23■□□□□ 0.19
CBWD3-204ENST00000377349 A0A0G2JMP0 313 aa16.22■□□□□ 0.19
CBWD3-204ENST00000377349 A0A0X1KG70 313 aa16.22■□□□□ 0.19
CBWD3-204ENST00000377349 ZSCAN5BA6NJL1 495 aa16.22■□□□□ 0.19
CBWD3-204ENST00000377349 CLDN25C9JDP6 229 aa16.22■□□□□ 0.19
CBWD3-204ENST00000377349 ARPC2O15144 300 aa16.22■□□□□ 0.19
CBWD3-204ENST00000377349 OR10H3O60404 316 aa16.22■□□□□ 0.19
CBWD3-204ENST00000377349 GPANK1O95872 356 aa16.22■□□□□ 0.19
CBWD3-204ENST00000377349 FABP3P05413 133 aa16.22■□□□□ 0.19
CBWD3-204ENST00000377349 HNRNPA0Q13151 305 aaKnown RBP16.22■□□□□ 0.19
CBWD3-204ENST00000377349 GPR139Q6DWJ6 353 aa16.22■□□□□ 0.19
CBWD3-204ENST00000377349 SMARCD3Q6STE5 483 aa16.22■□□□□ 0.19
CBWD3-204ENST00000377349 JAZF1Q86VZ6 243 aa16.22■□□□□ 0.19
CBWD3-204ENST00000377349 GLB1L2Q8IW92 636 aa16.22■□□□□ 0.19
CBWD3-204ENST00000377349 DEFB107AQ8IZN7 70 aa16.22■□□□□ 0.19
CBWD3-204ENST00000377349 PGAM4Q8N0Y7 254 aa16.22■□□□□ 0.19
CBWD3-204ENST00000377349 ZDHHC22Q8N966 263 aa16.22■□□□□ 0.19
CBWD3-204ENST00000377349 OR4M2Q8NGB6 313 aa16.22■□□□□ 0.19
CBWD3-204ENST00000377349 SLC7A6Q92536 515 aa16.22■□□□□ 0.19
CBWD3-204ENST00000377349 GCDHQ92947 438 aaPredicted RBP16.22■□□□□ 0.19
CBWD3-204ENST00000377349 ERMAPQ96PL5 475 aaPredicted RBP16.22■□□□□ 0.19
CBWD3-204ENST00000377349 TRIM77I1YAP6 450 aa16.21■□□□□ 0.19
CBWD3-204ENST00000377349 J3QLI3 93 aa16.21■□□□□ 0.19
CBWD3-204ENST00000377349 DCTN3O75935 186 aa16.21■□□□□ 0.19
CBWD3-204ENST00000377349 UBOX5O94941 541 aa16.21■□□□□ 0.19
CBWD3-204ENST00000377349 GSTM3P21266 225 aa16.21■□□□□ 0.19
CBWD3-204ENST00000377349 SMIM11AP58511 58 aa16.21■□□□□ 0.19
CBWD3-204ENST00000377349 TUSC1Q2TAM9 212 aa16.21■□□□□ 0.19
CBWD3-204ENST00000377349 SPRNQ5BIV9 151 aa16.21■□□□□ 0.19
CBWD3-204ENST00000377349 FAM209AQ5JX71 171 aa16.21■□□□□ 0.19
CBWD3-204ENST00000377349 MBNL2Q5VZF2 373 aaKnown RBP16.21■□□□□ 0.19
CBWD3-204ENST00000377349 C16orf89Q6UX73 402 aa16.21■□□□□ 0.19
CBWD3-204ENST00000377349 PTCHD4Q6ZW05 846 aa16.21■□□□□ 0.19
CBWD3-204ENST00000377349 TEX29Q8N6K0 151 aa16.21■□□□□ 0.19
CBWD3-204ENST00000377349 ELMOD3Q96FG2 381 aa16.21■□□□□ 0.19
CBWD3-204ENST00000377349 TIMD4Q96H15 378 aa16.21■□□□□ 0.19
CBWD3-204ENST00000377349 TSSK2Q96PF2 358 aa16.21■□□□□ 0.19
CBWD3-204ENST00000377349 IFT27Q9BW83 186 aa16.21■□□□□ 0.19
CBWD3-204ENST00000377349 RBM4Q9BWF3 364 aaKnown RBP16.21■□□□□ 0.19
CBWD3-204ENST00000377349 EGLN1Q9GZT9 426 aa16.21■□□□□ 0.19
CBWD3-204ENST00000377349 NUAK2Q9H093 628 aa16.21■□□□□ 0.19
CBWD3-204ENST00000377349 GORASP2Q9H8Y8 452 aa16.21■□□□□ 0.19
CBWD3-204ENST00000377349 NRIP3Q9NQ35 241 aa16.21■□□□□ 0.19
CBWD3-204ENST00000377349 TMCC3Q9ULS5 477 aa16.21■□□□□ 0.19
CBWD3-204ENST00000377349 PTP4A3O75365 173 aa16.2■□□□□ 0.18
CBWD3-204ENST00000377349 NOS3P29474 1203 aa16.2■□□□□ 0.18
CBWD3-204ENST00000377349 RRM2P31350 389 aa16.2■□□□□ 0.18
CBWD3-204ENST00000377349 DBPQ10586 325 aaPredicted RBP16.2■□□□□ 0.18
CBWD3-204ENST00000377349 AQP6Q13520 282 aa16.2■□□□□ 0.18
CBWD3-204ENST00000377349 MEP1BQ16820 701 aa16.2■□□□□ 0.18
CBWD3-204ENST00000377349 LEG1Q6P5S2 330 aa16.2■□□□□ 0.18
CBWD3-204ENST00000377349 DPY19L2P2Q6ZN68 376 aa16.2■□□□□ 0.18
CBWD3-204ENST00000377349 VASH1Q7L8A9 365 aaPredicted RBP16.2■□□□□ 0.18
CBWD3-204ENST00000377349 SYT9Q86SS6 491 aa16.2■□□□□ 0.18
CBWD3-204ENST00000377349 ADCK1Q86TW2 530 aa16.2■□□□□ 0.18
CBWD3-204ENST00000377349 C3orf56Q8N813 242 aa16.2■□□□□ 0.18
CBWD3-204ENST00000377349 GPA33Q99795 319 aa16.2■□□□□ 0.18
CBWD3-204ENST00000377349 POFUT1Q9H488 388 aa16.2■□□□□ 0.18
CBWD3-204ENST00000377349 UBAP1Q9NZ09 502 aa16.2■□□□□ 0.18
CBWD3-204ENST00000377349 AHCYL1O43865 530 aa16.19■□□□□ 0.18
CBWD3-204ENST00000377349 ICMTO60725 284 aa16.19■□□□□ 0.18
CBWD3-204ENST00000377349 ADH4P08319 380 aa16.19■□□□□ 0.18
CBWD3-204ENST00000377349 HSD17B1P14061 328 aa16.19■□□□□ 0.18
CBWD3-204ENST00000377349 CDKN2AP42771 156 aaKnown RBP16.19■□□□□ 0.18
CBWD3-204ENST00000377349 FXYD6P3P58550 94 aa16.19■□□□□ 0.18
CBWD3-204ENST00000377349 ZMAT1Q5H9K5 638 aa16.19■□□□□ 0.18
CBWD3-204ENST00000377349 DCAF12L2Q5VW00 463 aa16.19■□□□□ 0.18
CBWD3-204ENST00000377349 DNM1P34Q6PK57 102 aa16.19■□□□□ 0.18
CBWD3-204ENST00000377349 CYP2R1Q6VVX0 501 aa16.19■□□□□ 0.18
CBWD3-204ENST00000377349 DVL3Q92997 716 aaPredicted RBP16.19■□□□□ 0.18
CBWD3-204ENST00000377349 ZMYND19Q96E35 227 aaPredicted RBP16.19■□□□□ 0.18
CBWD3-204ENST00000377349 JMJD8Q96S16 334 aa16.19■□□□□ 0.18
CBWD3-204ENST00000377349 GPX7Q96SL4 187 aaPredicted RBP16.19■□□□□ 0.18
CBWD3-204ENST00000377349 GAL3ST1Q99999 423 aa16.19■□□□□ 0.18
CBWD3-204ENST00000377349 OR52D1Q9H346 318 aa16.19■□□□□ 0.18
CBWD3-204ENST00000377349 SRA1Q9HD15 236 aaKnown RBP16.19■□□□□ 0.18
CBWD3-204ENST00000377349 CYSLTR2Q9NS75 346 aa16.19■□□□□ 0.18
CBWD3-204ENST00000377349 DCAF16Q9NXF7 216 aa16.19■□□□□ 0.18
CBWD3-204ENST00000377349 VSX1Q9NZR4 365 aaPredicted RBP16.19■□□□□ 0.18
CBWD3-204ENST00000377349 KLHL21Q9UJP4 597 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms