RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 RNASE10Q5GAN6 216 aaKnown RBP7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 ZNF774Q6NX45 483 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 APOOLQ6UXV4 268 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 SYT9Q86SS6 491 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 SEMA6DQ8NFY4 1073 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 ORAI1Q96D31 301 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 TIMD4Q96H15 378 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 USB1Q9BQ65 265 aaKnown RBP7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 ERVK13-1Q9NX77 482 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 GNG12Q9UBI6 72 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 KCNN3Q9UGI6 736 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 NOP16Q9Y3C1 178 aaKnown RBP7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 ABCA2Q9BZC7 2435 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 TICRRQ7Z2Z1 1910 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 SLC16A6O15403 523 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 PABPC1L2AQ5JQF8 200 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 TMEM108Q6UXF1 575 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 UNQ6494/PRO21346Q6UXR6 183 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 SHISA5Q8N114 240 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 SCCPDHQ8NBX0 429 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 APCDD1LQ8NCL9 501 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 NOXO1Q8NFA2 376 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 MCHR2Q969V1 340 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 INPP5EQ9NRR6 644 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 ABRACLQ9P1F3 81 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 PSORS1C1Q9UIG5 152 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 KNG1P01042 644 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 CTLA4P16410 223 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 NFYBP25208 207 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 ZNF93P35789 620 aaPredicted RBP7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 RPS25P62851 125 aaKnown RBP7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 SNTB2Q13425 540 aaKnown RBP7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 CTU2Q2VPK5 515 aaKnown RBP7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 EMC4Q5J8M3 183 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 EXOSC6Q5RKV6 272 aaKnown RBP7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 GLYATL3Q5SZD4 288 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 SFRP4Q6FHJ7 346 aaPredicted RBP7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 OR2T2Q6IF00 324 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 Q8N402 240 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 DRAXINQ8NBI3 349 aaPredicted RBP7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 C15orf40Q8WUR7 153 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 MED28Q9H204 178 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 TP63Q9H3D4 680 aaPredicted RBP7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 TRAPPC2LQ9UL33 140 aa7.57□□□□□ -1.2
CRNKL1-202ENST00000377340 LOC107986453A0A1B0GWG9 222 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 OR6C68A6NDL8 312 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 B4DXG7 233 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 GABRPO00591 440 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 HLA-DOBP13765 273 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 BDKRB2P30411 391 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 OPRM1P35372 400 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 VEGFCP49767 419 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 AP2S1P53680 142 aaPredicted RBP7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 TCF15Q12870 199 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 TMPRSS11FQ6ZWK6 438 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 SSX6Q7RTT6 188 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 ZNF610Q8N9Z0 462 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 OR2AE1Q8NHA4 323 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 ZNF385AQ96PM9 386 aaKnown RBP7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 PTTG2Q9NZH5 202 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 SHANK1Q9Y566 2161 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 HS3ST1O14792 307 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 BET1O15155 118 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 GPRIN2O60269 458 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 SLC34A2O95436 690 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 UMODP07911 640 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 CELA3AP09093 270 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 RFPL3SP0C7P2 107 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 PRKACBP22694 351 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 PRSS3P35030 304 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 CDKN2AP42771 156 aaKnown RBP7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 ZFP36L2P47974 494 aaKnown RBP7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 KLRB1Q12918 225 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 Q499Y3 187 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 SLC35D3Q5M8T2 416 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 HAGHLQ6PII5 290 aaPredicted RBP7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 MRGPRGQ86SM5 289 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 FBXL14Q8N1E6 418 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 OR4Q3Q8NH05 313 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 RHNO1Q9BSD3 238 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 METTL9Q9H1A3 318 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 ABCG5Q9H222 651 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 BANF2Q9H503 90 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 ASF1BQ9NVP2 202 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 RALYQ9UKM9 306 aaKnown RBP7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 HIF3AQ9Y2N7 669 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 NAV3Q8IVL0 2385 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 NYNRINQ9P2P1 1898 aaKnown RBP7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 LIPT2A6NK58 231 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 ZAR1LA6NP61 321 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 H3BMH7 237 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 TGFBR3LH3BV60 316 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 PLPP3O14495 311 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 BLVRBP30043 206 aaPredicted RBP7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 EIF2B2P49770 351 aaKnown RBP7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 HIKESHIQ53FT3 197 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 LSRQ86X29 649 aaPredicted RBP7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 ANGPTL5Q86XS5 388 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 CROCCP3Q8IVE0 287 aa7.56□□□□□ -1.2
CRNKL1-202ENST00000377340 OR2Z1Q8NG97 314 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms