RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 MICU1Q9BPX6 476 aa14.83□□□□□ -0.04
TRIM39-201ENST00000376656 RNF126Q9BV68 326 aa14.83□□□□□ -0.04
TRIM39-201ENST00000376656 DHCR7Q9UBM7 475 aaKnown RBP14.83□□□□□ -0.04
TRIM39-201ENST00000376656 C11orf98E9PRG8 122 aa14.83□□□□□ -0.04
TRIM39-201ENST00000376656 GMFGO60234 142 aa14.83□□□□□ -0.04
TRIM39-201ENST00000376656 DEFB110Q30KQ9 67 aa14.83□□□□□ -0.04
TRIM39-201ENST00000376656 KLHL26Q53HC5 615 aa14.83□□□□□ -0.04
TRIM39-201ENST00000376656 TEX30Q5JUR7 227 aa14.83□□□□□ -0.04
TRIM39-201ENST00000376656 SLC16A13Q7RTY0 426 aa14.83□□□□□ -0.04
TRIM39-201ENST00000376656 ZSCAN4Q8NAM6 433 aaPredicted RBP14.83□□□□□ -0.04
TRIM39-201ENST00000376656 C16orf52Q8NHV5 167 aa14.83□□□□□ -0.04
TRIM39-201ENST00000376656 BAHD1Q8TBE0 780 aaPredicted RBP14.83□□□□□ -0.04
TRIM39-201ENST00000376656 ROBO4Q8WZ75 1007 aa14.83□□□□□ -0.04
TRIM39-201ENST00000376656 TAAR8Q969N4 342 aa14.83□□□□□ -0.04
TRIM39-201ENST00000376656 ZNF107Q9UII5 783 aaPredicted RBP14.83□□□□□ -0.04
TRIM39-201ENST00000376656 EFSO43281 561 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 PJVKQ0ZLH3 352 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 NUDCD2Q8WVJ2 157 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 PATE1Q8WXA2 126 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 RSC1A1Q92681 617 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 TOX2Q96NM4 488 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 NRIP2Q9BQI9 281 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 HRH4Q9H3N8 390 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 FN3KRPQ9HA64 309 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 TBC1D3DA0A087WVF3 549 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 TBC1D3LB9A6J9 549 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 H0YIZ8 118 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 LMX1BO60663 402 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 CD2P06729 351 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 HEXAP06865 529 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 TBC1D3HP0C7X1 549 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 MUC1P15941 1255 aaPredicted RBP14.82□□□□□ -0.04
TRIM39-201ENST00000376656 PPP1CAP62136 330 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 TBC1D3CQ6IPX1 549 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 SPRED2Q7Z698 418 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 TBC1D3Q8IZP1 549 aaPredicted RBP14.82□□□□□ -0.04
TRIM39-201ENST00000376656 ZDHHC22Q8N966 263 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 OR4D6Q8NGJ1 314 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 PHOSPHO1Q8TCT1 267 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 AQP3Q92482 292 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 ASB16Q96NS5 453 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 MSGN1A6NI15 193 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 GJA4P35212 333 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 CTNNB1P35222 781 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 ARRB1P49407 418 aaPredicted RBP14.82□□□□□ -0.04
TRIM39-201ENST00000376656 HABP2Q14520 560 aaPredicted RBP14.82□□□□□ -0.04
TRIM39-201ENST00000376656 IGSF11Q5DX21 431 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 FAM109BQ6ICB4 259 aaPredicted RBP14.82□□□□□ -0.04
TRIM39-201ENST00000376656 RBMS3Q6XE24 437 aaKnown RBP14.82□□□□□ -0.04
TRIM39-201ENST00000376656 TAF8Q7Z7C8 310 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 PARGQ86W56 976 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 LINC00469Q8N7U9 141 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 BHLHE23Q8NDY6 225 aa14.82□□□□□ -0.04
TRIM39-201ENST00000376656 MRPL22Q9NWU5 206 aaKnown RBP14.82□□□□□ -0.04
TRIM39-201ENST00000376656 RCC2Q9P258 522 aaKnown RBP14.82□□□□□ -0.04
TRIM39-201ENST00000376656 COLCA2A8K830 154 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 CBR1P16152 277 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 HRH1P35367 487 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 RBM39Q14498 530 aaKnown RBP14.81□□□□□ -0.04
TRIM39-201ENST00000376656 ZNF260Q3ZCT1 412 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 POMZP3Q6PJE2 187 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 ZSCAN1Q8NBB4 408 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 EIF1AYO14602 144 aaKnown RBP14.81□□□□□ -0.04
TRIM39-201ENST00000376656 SGCEO43556 437 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 ATXN8OSP0DMR3 200 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 GDI1P31150 447 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 EIF1AXP47813 144 aaKnown RBP14.81□□□□□ -0.04
TRIM39-201ENST00000376656 BTG2P78543 158 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 RTN4RL2Q86UN3 420 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 CATSPERDQ86XM0 798 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 SFTPA2Q8IWL1 248 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 CHST4Q8NCG5 386 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 CCDC3Q9BQI4 270 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 TWSG1Q9GZX9 223 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 RHOFQ9HBH0 211 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 NUDT19A8MXV4 375 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 DUS4LO95620 317 aaKnown RBP14.81□□□□□ -0.04
TRIM39-201ENST00000376656 POLR2GP62487 172 aaKnown RBP eCLIP14.81□□□□□ -0.04
TRIM39-201ENST00000376656 NAAAQ02083 359 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 SKP2Q13309 424 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 C1QL3Q5VWW1 255 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 SLC18B1Q6NT16 456 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 MARCH3Q86UD3 253 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 TMEM200AQ86VY9 491 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 FAM219AQ8IW50 185 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 ZNF440Q8IYI8 595 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 SPPL3Q8TCT6 385 aa14.81□□□□□ -0.04
TRIM39-201ENST00000376656 GDF2Q9UK05 429 aaPredicted RBP14.81□□□□□ -0.04
TRIM39-201ENST00000376656 DBX1A6NMT0 343 aa14.8□□□□□ -0.04
TRIM39-201ENST00000376656 FSTP19883 344 aa14.8□□□□□ -0.04
TRIM39-201ENST00000376656 DNASE1L1P49184 302 aa14.8□□□□□ -0.04
TRIM39-201ENST00000376656 PEA15Q15121 130 aa14.8□□□□□ -0.04
TRIM39-201ENST00000376656 FAM209BQ5JX69 171 aa14.8□□□□□ -0.04
TRIM39-201ENST00000376656 IL34Q6ZMJ4 242 aa14.8□□□□□ -0.04
TRIM39-201ENST00000376656 RTL10Q7L3V2 364 aa14.8□□□□□ -0.04
TRIM39-201ENST00000376656 SLC29A4Q7RTT9 530 aa14.8□□□□□ -0.04
TRIM39-201ENST00000376656 OR13C3Q8NGS6 347 aa14.8□□□□□ -0.04
TRIM39-201ENST00000376656 RELTQ969Z4 430 aa14.8□□□□□ -0.04
TRIM39-201ENST00000376656 LRP12Q9Y561 859 aa14.8□□□□□ -0.04
TRIM39-201ENST00000376656 TRBV6-7A0A0A0MS04 114 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms