RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 CASKO14936 926 aa18.66■□□□□ 0.58
HLA-C-201ENST00000376228 ARL6IP5O75915 188 aa18.66■□□□□ 0.58
HLA-C-201ENST00000376228 ZFPL1O95159 310 aa18.66■□□□□ 0.58
HLA-C-201ENST00000376228 UCHL1P09936 223 aa18.66■□□□□ 0.58
HLA-C-201ENST00000376228 S100A5P33763 92 aa18.66■□□□□ 0.58
HLA-C-201ENST00000376228 ETV6P41212 452 aa18.66■□□□□ 0.58
HLA-C-201ENST00000376228 RIDAP52758 137 aaKnown RBP18.66■□□□□ 0.58
HLA-C-201ENST00000376228 ZNF544Q6NX49 715 aa18.66■□□□□ 0.58
HLA-C-201ENST00000376228 LRRN1Q6UXK5 716 aa18.66■□□□□ 0.58
HLA-C-201ENST00000376228 DCXRQ7Z4W1 244 aa18.66■□□□□ 0.58
HLA-C-201ENST00000376228 MFSD4AQ8N468 514 aa18.66■□□□□ 0.58
HLA-C-201ENST00000376228 OR6N1Q8NGY5 312 aa18.66■□□□□ 0.58
HLA-C-201ENST00000376228 ROBO4Q8WZ75 1007 aa18.66■□□□□ 0.58
HLA-C-201ENST00000376228 PSMG3-AS1Q96PY0 264 aa18.66■□□□□ 0.58
HLA-C-201ENST00000376228 PDCD1LG2Q9BQ51 273 aa18.66■□□□□ 0.58
HLA-C-201ENST00000376228 POLE4Q9NR33 117 aa18.66■□□□□ 0.58
HLA-C-201ENST00000376228 TINAGQ9UJW2 476 aa18.66■□□□□ 0.58
HLA-C-201ENST00000376228 FLNBO75369 2602 aaKnown RBP18.66■□□□□ 0.58
HLA-C-201ENST00000376228 NCOA6Q14686 2063 aaPredicted RBP18.65■□□□□ 0.58
HLA-C-201ENST00000376228 SHISA3A0PJX4 238 aa18.65■□□□□ 0.58
HLA-C-201ENST00000376228 GPR171O14626 319 aa18.65■□□□□ 0.58
HLA-C-201ENST00000376228 RPP14O95059 124 aaKnown RBP18.65■□□□□ 0.58
HLA-C-201ENST00000376228 CLEC2LP0C7M8 214 aa18.65■□□□□ 0.58
HLA-C-201ENST00000376228 CPN1P15169 458 aa18.65■□□□□ 0.58
HLA-C-201ENST00000376228 MXD1Q05195 221 aa18.65■□□□□ 0.58
HLA-C-201ENST00000376228 FGD2Q7Z6J4 655 aa18.65■□□□□ 0.58
HLA-C-201ENST00000376228 OR5AK2Q8NH90 309 aa18.65■□□□□ 0.58
HLA-C-201ENST00000376228 AP3S1Q92572 193 aa18.65■□□□□ 0.58
HLA-C-201ENST00000376228 C4orf45Q96LM5 186 aa18.65■□□□□ 0.58
HLA-C-201ENST00000376228 C6orf62Q9GZU0 229 aaPredicted RBP18.65■□□□□ 0.58
HLA-C-201ENST00000376228 TPK1Q9H3S4 243 aa18.65■□□□□ 0.58
HLA-C-201ENST00000376228 ICE1Q9Y2F5 2266 aa18.65■□□□□ 0.58
HLA-C-201ENST00000376228 A0A1B0GTH9 108 aa18.64■□□□□ 0.58
HLA-C-201ENST00000376228 A0A1W2PPL8 197 aa18.64■□□□□ 0.58
HLA-C-201ENST00000376228 DHHO43323 396 aa18.64■□□□□ 0.58
HLA-C-201ENST00000376228 SLC43A1O75387 559 aa18.64■□□□□ 0.58
HLA-C-201ENST00000376228 SRSF10O75494 262 aaKnown RBP18.64■□□□□ 0.58
HLA-C-201ENST00000376228 IGHG3P01860 377 aa18.64■□□□□ 0.58
HLA-C-201ENST00000376228 BMP4P12644 408 aa18.64■□□□□ 0.58
HLA-C-201ENST00000376228 SELENOPP49908 381 aa18.64■□□□□ 0.58
HLA-C-201ENST00000376228 HNRNPA0Q13151 305 aaKnown RBP18.64■□□□□ 0.58
HLA-C-201ENST00000376228 C3AR1Q16581 482 aa18.64■□□□□ 0.58
HLA-C-201ENST00000376228 RIPPLY2Q5TAB7 128 aa18.64■□□□□ 0.58
HLA-C-201ENST00000376228 HSD17B8Q92506 261 aa18.64■□□□□ 0.58
HLA-C-201ENST00000376228 THRSPQ92748 146 aa18.64■□□□□ 0.58
HLA-C-201ENST00000376228 ZNF845Q96IR2 970 aaPredicted RBP18.64■□□□□ 0.58
HLA-C-201ENST00000376228 PPIL3Q9H2H8 161 aaKnown RBP18.64■□□□□ 0.58
HLA-C-201ENST00000376228 C1orf198Q9H425 327 aa18.64■□□□□ 0.58
HLA-C-201ENST00000376228 SMURF1Q9HCE7 757 aa18.64■□□□□ 0.58
HLA-C-201ENST00000376228 LRP12Q9Y561 859 aa18.64■□□□□ 0.58
HLA-C-201ENST00000376228 TRGV5A0A0B4J1U4 118 aa18.64■□□□□ 0.57
HLA-C-201ENST00000376228 TRBV5-5A0A0J9YX44 114 aa18.64■□□□□ 0.57
HLA-C-201ENST00000376228 DVL2O14641 736 aa18.64■□□□□ 0.57
HLA-C-201ENST00000376228 SYNGR4O95473 234 aa18.64■□□□□ 0.57
HLA-C-201ENST00000376228 ABOP16442 354 aa18.64■□□□□ 0.57
HLA-C-201ENST00000376228 MYL9P24844 172 aa18.64■□□□□ 0.57
HLA-C-201ENST00000376228 CALRP27797 417 aaKnown RBP18.64■□□□□ 0.57
HLA-C-201ENST00000376228 CA7P43166 264 aa18.64■□□□□ 0.57
HLA-C-201ENST00000376228 PHYHD1Q5SRE7 291 aa18.64■□□□□ 0.57
HLA-C-201ENST00000376228 OTPQ5XKR4 325 aa18.64■□□□□ 0.57
HLA-C-201ENST00000376228 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.64■□□□□ 0.57
HLA-C-201ENST00000376228 WDFY2Q96P53 400 aa18.64■□□□□ 0.57
HLA-C-201ENST00000376228 COMMD4Q9H0A8 199 aa18.64■□□□□ 0.57
HLA-C-201ENST00000376228 SEC61A2Q9H9S3 476 aa18.64■□□□□ 0.57
HLA-C-201ENST00000376228 MCTS1Q9ULC4 181 aaKnown RBP18.64■□□□□ 0.57
HLA-C-201ENST00000376228 ZNF835Q9Y2P0 537 aa18.64■□□□□ 0.57
HLA-C-201ENST00000376228 LIPGQ9Y5X9 500 aa18.64■□□□□ 0.57
HLA-C-201ENST00000376228 LHFPL6Q9Y693 200 aa18.64■□□□□ 0.57
HLA-C-201ENST00000376228 USP9YO00507 2555 aaPredicted RBP18.63■□□□□ 0.57
HLA-C-201ENST00000376228 A0A1B0GUH1 482 aa18.63■□□□□ 0.57
HLA-C-201ENST00000376228 WIPF3A6NGB9 483 aa18.63■□□□□ 0.57
HLA-C-201ENST00000376228 ZNF879B4DU55 563 aa18.63■□□□□ 0.57
HLA-C-201ENST00000376228 CCL21O00585 134 aa18.63■□□□□ 0.57
HLA-C-201ENST00000376228 ZG16O60844 167 aa18.63■□□□□ 0.57
HLA-C-201ENST00000376228 GUCA1AP43080 201 aaPredicted RBP18.63■□□□□ 0.57
HLA-C-201ENST00000376228 ZNF45Q02386 682 aa18.63■□□□□ 0.57
HLA-C-201ENST00000376228 AAED1Q7RTV5 226 aa18.63■□□□□ 0.57
HLA-C-201ENST00000376228 LINC00346Q8IVM7 164 aa18.63■□□□□ 0.57
HLA-C-201ENST00000376228 PRSS35Q8N3Z0 413 aa18.63■□□□□ 0.57
HLA-C-201ENST00000376228 OR13C5Q8NGS8 318 aa18.63■□□□□ 0.57
HLA-C-201ENST00000376228 RGP1Q92546 391 aaPredicted RBP18.63■□□□□ 0.57
HLA-C-201ENST00000376228 NELFAQ9H3P2 528 aa18.63■□□□□ 0.57
HLA-C-201ENST00000376228 NIPAL2Q9H841 368 aa18.63■□□□□ 0.57
HLA-C-201ENST00000376228 R4GMQ9 66 aa18.63■□□□□ 0.57
HLA-C-201ENST00000376228 ZNF724A8MTY0 619 aa18.62■□□□□ 0.57
HLA-C-201ENST00000376228 MSR1P21757 451 aa18.62■□□□□ 0.57
HLA-C-201ENST00000376228 MAPK3P27361 379 aaPredicted RBP18.62■□□□□ 0.57
HLA-C-201ENST00000376228 CD40LGP29965 261 aa18.62■□□□□ 0.57
HLA-C-201ENST00000376228 NTF4P34130 210 aa18.62■□□□□ 0.57
HLA-C-201ENST00000376228 KIR3DL2P43630 455 aa18.62■□□□□ 0.57
HLA-C-201ENST00000376228 ZNF84P51523 738 aa18.62■□□□□ 0.57
HLA-C-201ENST00000376228 MRPS34P82930 218 aaKnown RBP18.62■□□□□ 0.57
HLA-C-201ENST00000376228 STK11Q15831 433 aa18.62■□□□□ 0.57
HLA-C-201ENST00000376228 Q499Y3 187 aa18.62■□□□□ 0.57
HLA-C-201ENST00000376228 C3P1Q6ZMU1 363 aa18.62■□□□□ 0.57
HLA-C-201ENST00000376228 CCDC190Q86UF4 302 aa18.62■□□□□ 0.57
HLA-C-201ENST00000376228 CATSPERDQ86XM0 798 aa18.62■□□□□ 0.57
HLA-C-201ENST00000376228 OR2AJ1Q8NGZ0 328 aa18.62■□□□□ 0.57
HLA-C-201ENST00000376228 SLAMF6Q96DU3 332 aa18.62■□□□□ 0.57
HLA-C-201ENST00000376228 KCNS3Q9BQ31 491 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms