RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 CA13Q8N1Q1 262 aa11.63□□□□□ -0.55
MSH5-204ENST00000375755 OR13C8Q8NGS7 320 aa11.63□□□□□ -0.55
MSH5-204ENST00000375755 STOML3Q8TAV4 291 aa11.63□□□□□ -0.55
MSH5-204ENST00000375755 GAL3ST1Q99999 423 aa11.63□□□□□ -0.55
MSH5-204ENST00000375755 CCDC3Q9BQI4 270 aa11.63□□□□□ -0.55
MSH5-204ENST00000375755 ZNF426Q9BUY5 554 aa11.63□□□□□ -0.55
MSH5-204ENST00000375755 NMNAT2Q9BZQ4 307 aa11.63□□□□□ -0.55
MSH5-204ENST00000375755 C1orf196B1AJZ1 125 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 F8VVB4 439 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 F8VWA3 439 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 HRKO00198 91 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 S100A6P06703 90 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 FOSL2P15408 326 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 SCAND1P57086 179 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 ACTBP60709 375 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 ACTG1P63261 375 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 PJVKQ0ZLH3 352 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 SCGB2B2Q4G0G5 96 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 NKAPLQ5M9Q1 402 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 RNF141Q8WVD5 230 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 C14orf79Q96F83 325 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 LRFN5Q96NI6 719 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 TGM7Q96PF1 710 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 ATG5Q9H1Y0 275 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 SEMA6CQ9H3T2 930 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 SEC16AO15027 2179 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 TGFBR3LH3BV60 316 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 GATCO43716 136 aaKnown RBP11.62□□□□□ -0.55
MSH5-204ENST00000375755 PRKNO60260 465 aaPredicted RBP11.62□□□□□ -0.55
MSH5-204ENST00000375755 HTR3BO95264 441 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 LY86O95711 162 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 CSN2P05814 226 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 FAM157CP0CG43 387 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 TPT1P13693 172 aaKnown RBP11.62□□□□□ -0.55
MSH5-204ENST00000375755 CPMP14384 443 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 NME1P15531 152 aaKnown RBP11.62□□□□□ -0.55
MSH5-204ENST00000375755 ZNF28P17035 718 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 AVPR2P30518 371 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 C21orf62-AS1Q17RA5 79 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 ACER2Q5QJU3 275 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 RHOUQ7L0Q8 258 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 SLC29A4Q7RTT9 530 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 BAP18Q8IXM2 172 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 ZNF614Q8N883 585 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 TMEM229BQ8NBD8 167 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 SLC30A7Q8NEW0 376 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 ZNF285Q96NJ3 590 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 TSSK2Q96PF2 358 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 ALG12Q9BV10 488 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 EDEM2Q9BV94 578 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 RXFP3Q9NSD7 469 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 VSIG4Q9Y279 399 aa11.62□□□□□ -0.55
MSH5-204ENST00000375755 FARSAQ9Y285 508 aaKnown RBP11.62□□□□□ -0.55
MSH5-204ENST00000375755 A0A0B4J2A0 478 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 OR4C45A6NMZ5 311 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 ZNF208O43345 1280 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 TXNL1O43396 289 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 ZBTB25P24278 435 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 AQP2P41181 271 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 BLKP51451 505 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 STARD6P59095 220 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 FABP9Q0Z7S8 132 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 ALG10BQ5I7T1 473 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 SLC35D3Q5M8T2 416 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 ARMC6Q6NXE6 501 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 FAM220AQ7Z4H9 259 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 COX18Q8N8Q8 333 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 C19orf47Q8N9M1 422 aaKnown RBP11.61□□□□□ -0.55
MSH5-204ENST00000375755 ZNF417Q8TAU3 575 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 HIST1H2BAQ96A08 127 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 FAM3DQ96BQ1 224 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 CLCC1Q96S66 551 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 SLC6A7Q99884 636 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 NAA11Q9BSU3 229 aaPredicted RBP11.61□□□□□ -0.55
MSH5-204ENST00000375755 EGLN1Q9GZT9 426 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 SHPKQ9UHJ6 478 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 TMEM184BQ9Y519 407 aaPredicted RBP11.61□□□□□ -0.55
MSH5-204ENST00000375755 IGHV5-51A0A0C4DH38 117 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 NUDT19A8MXV4 375 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 EEF1E1-BLOC1S5C9J1V9 151 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 GLCEO94923 617 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 ABHD16AO95870 558 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 APEHP13798 732 aaKnown RBP11.61□□□□□ -0.55
MSH5-204ENST00000375755 AKR1C3P42330 323 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 F2RL1P55085 397 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 SSBP1Q04837 148 aaKnown RBP11.61□□□□□ -0.55
MSH5-204ENST00000375755 AIMP2Q13155 320 aaKnown RBP11.61□□□□□ -0.55
MSH5-204ENST00000375755 PPP1R1AQ13522 171 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 SGCAQ16586 387 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.61□□□□□ -0.55
MSH5-204ENST00000375755 ZNF595Q8IYB9 648 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 BPIFB2Q8N4F0 458 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 ADAD1Q96M93 576 aaKnown RBP11.61□□□□□ -0.55
MSH5-204ENST00000375755 LMF1Q96S06 567 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 WDR77Q9BQA1 342 aaPredicted RBP11.61□□□□□ -0.55
MSH5-204ENST00000375755 PAPOLGQ9BWT3 736 aaKnown RBP11.61□□□□□ -0.55
MSH5-204ENST00000375755 HRH4Q9H3N8 390 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 CYTL1Q9NRR1 136 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 CDC40O60508 579 aaKnown RBP eCLIP11.61□□□□□ -0.55
MSH5-204ENST00000375755 TACSTD2P09758 323 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms