RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 EEF1E1-BLOC1S5C9J1V9 151 aa18.98■□□□□ 0.63
UPF3A-202ENST00000375299 EIF1AYO14602 144 aaKnown RBP18.98■□□□□ 0.63
UPF3A-202ENST00000375299 BGLAPP02818 100 aa18.98■□□□□ 0.63
UPF3A-202ENST00000375299 HOXB1P14653 301 aaPredicted RBP18.98■□□□□ 0.63
UPF3A-202ENST00000375299 PGAM2P15259 253 aa18.98■□□□□ 0.63
UPF3A-202ENST00000375299 EIF1AXP47813 144 aaKnown RBP18.98■□□□□ 0.63
UPF3A-202ENST00000375299 DNASE1L1P49184 302 aa18.98■□□□□ 0.63
UPF3A-202ENST00000375299 ARRB1P49407 418 aaPredicted RBP18.98■□□□□ 0.63
UPF3A-202ENST00000375299 SPOCK1Q08629 439 aa18.98■□□□□ 0.63
UPF3A-202ENST00000375299 TMEM196Q5HYL7 178 aa18.98■□□□□ 0.63
UPF3A-202ENST00000375299 FBXO46Q6PJ61 603 aaPredicted RBP18.98■□□□□ 0.63
UPF3A-202ENST00000375299 OR4K17Q8NGC6 315 aa18.98■□□□□ 0.63
UPF3A-202ENST00000375299 TMEM100Q9NV29 134 aa18.98■□□□□ 0.63
UPF3A-202ENST00000375299 PRODH2Q9UF12 536 aa18.98■□□□□ 0.63
UPF3A-202ENST00000375299 LRP12Q9Y561 859 aa18.98■□□□□ 0.63
UPF3A-202ENST00000375299 PQLC2LA1A4F0 135 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 NUDT19A8MXV4 375 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 CLPSP04118 112 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 ST6GAL1P15907 406 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 MAOAP21397 527 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 H3F3CQ6NXT2 135 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 FAHD2BQ6P2I3 314 aaPredicted RBP18.97■□□□□ 0.63
UPF3A-202ENST00000375299 KCTD9Q7L273 389 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 MDGA2Q7Z553 956 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 TRAPPC6BQ86SZ2 158 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 OOSP2Q86WS3 158 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 CASTOR1Q8WTX7 329 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 METTL21AQ8WXB1 218 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 WNT2BQ93097 391 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 DNAJA3Q96EY1 480 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 FAHD2AQ96GK7 314 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 RPP25Q9BUL9 199 aaKnown RBP18.97■□□□□ 0.63
UPF3A-202ENST00000375299 SEMA6CQ9H3T2 930 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 PRSS37A4D1T9 235 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 WIPF3A6NGB9 483 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 KCNAB3O43448 404 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 STK17BO94768 372 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 PLGP00747 810 aaPredicted RBP18.97■□□□□ 0.63
UPF3A-202ENST00000375299 CRHP06850 196 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 TNFRSF4P43489 277 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 SRSF3P84103 164 aaKnown RBP18.97■□□□□ 0.63
UPF3A-202ENST00000375299 EIF2B1Q14232 305 aaKnown RBP18.97■□□□□ 0.63
UPF3A-202ENST00000375299 OR7A5Q15622 319 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 ZNF260Q3ZCT1 412 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 PLEKHN1Q494U1 663 aaPredicted RBP18.97■□□□□ 0.63
UPF3A-202ENST00000375299 C1orf100Q5SVJ3 147 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 PARM1Q6UWI2 310 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 PGAP1Q75T13 922 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 SFTPA2Q8IWL1 248 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 SLC30A7Q8NEW0 376 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 OR13C3Q8NGS6 347 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 RNF141Q8WVD5 230 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 FGF14Q92915 247 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 CNTNAP3BQ96NU0 1288 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 S1PR5Q9H228 398 aa18.97■□□□□ 0.63
UPF3A-202ENST00000375299 GDF2Q9UK05 429 aaPredicted RBP18.97■□□□□ 0.63
UPF3A-202ENST00000375299 XIRP2A4UGR9 3374 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 KIF26BQ2KJY2 2108 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 TEX13DA0A0J9YY54 714 aaPredicted RBP18.96■□□□□ 0.63
UPF3A-202ENST00000375299 LOC390937A0A1W2PQ73 354 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 CLDN4O14493 209 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 TNFRSF10CO14798 259 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 SLC16A7O60669 478 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 SNAPINO95295 136 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 RAB6AP20340 208 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 PSMB6P28072 239 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 OR1M1Q8NGA1 313 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 OIT3Q8WWZ8 545 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 NKD1Q969G9 470 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 ABHD6Q9BV23 337 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 ADAM19Q9H013 955 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 TLNRD1Q9H1K6 362 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 CHMP1AQ9HD42 196 aaPredicted RBP18.96■□□□□ 0.63
UPF3A-202ENST00000375299 HHLA2Q9UM44 414 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 CSAG2Q9Y5P2 127 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 IGLV1-36A0A0B4J1U3 117 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 BLACEA4D250 179 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 UTS2O95399 124 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 VAMP1P23763 118 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 NTSR1P30989 418 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 PNLIPRP2P54317 469 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 S100A12P80511 92 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 INSM1Q01101 510 aaPredicted RBP18.96■□□□□ 0.63
UPF3A-202ENST00000375299 ZNF761Q86XN6 746 aaPredicted RBP18.96■□□□□ 0.63
UPF3A-202ENST00000375299 BAP18Q8IXM2 172 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 OR4D6Q8NGJ1 314 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 DCUN1D4Q92564 292 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 IGFLR1Q9H665 355 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 CTSFQ9UBX1 484 aa18.96■□□□□ 0.63
UPF3A-202ENST00000375299 LRP4O75096 1905 aa18.95■□□□□ 0.62
UPF3A-202ENST00000375299 ALPK2Q86TB3 2170 aa18.95■□□□□ 0.62
UPF3A-202ENST00000375299 CPED1A4D0V7 1026 aa18.95■□□□□ 0.62
UPF3A-202ENST00000375299 IL33O95760 270 aa18.95■□□□□ 0.62
UPF3A-202ENST00000375299 ERCC1P07992 297 aaPredicted RBP18.95■□□□□ 0.62
UPF3A-202ENST00000375299 RPL27P61353 136 aaKnown RBP18.95■□□□□ 0.62
UPF3A-202ENST00000375299 NAAAQ02083 359 aa18.95■□□□□ 0.62
UPF3A-202ENST00000375299 BIKQ13323 160 aa18.95■□□□□ 0.62
UPF3A-202ENST00000375299 PAQR4Q8N4S7 273 aaPredicted RBP18.95■□□□□ 0.62
UPF3A-202ENST00000375299 GVQW1Q8N7I0 195 aa18.95■□□□□ 0.62
UPF3A-202ENST00000375299 ADAD2Q8NCV1 583 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms