RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 KIAA0100Q14667 2235 aaKnown RBP13.08□□□□□ -0.32
TRAF1-201ENST00000373887 SSSCA1O60232 199 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 SLC19A1P41440 591 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 H3F3CQ6NXT2 135 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 LCN15Q6UWW0 184 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 DHRS13Q6UX07 377 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 GOT1L1Q8NHS2 421 aaPredicted RBP13.08□□□□□ -0.32
TRAF1-201ENST00000373887 CPPED1Q9BRF8 314 aaPredicted RBP13.08□□□□□ -0.32
TRAF1-201ENST00000373887 PSORS1C1Q9UIG5 152 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 SCN7AQ01118 1682 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 MYO18AQ92614 2054 aaKnown RBP13.08□□□□□ -0.32
TRAF1-201ENST00000373887 UBL3O95164 117 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 PDZK1IP1Q13113 114 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 LGI3Q8N145 548 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 ZDHHC5Q9C0B5 715 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 RAB22AQ9UL26 194 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 IGHV3-15A0A0B4J1V0 119 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 ZC3H12DA2A288 527 aaKnown RBP13.08□□□□□ -0.32
TRAF1-201ENST00000373887 PLPP1O14494 284 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 WNT11O96014 354 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 PDGFAP04085 211 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 H2AFB1P0C5Y9 115 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 ELAVL4P26378 380 aaKnown RBP13.08□□□□□ -0.32
TRAF1-201ENST00000373887 OR5I1Q13606 314 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 ZNF425Q6IV72 752 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 PRR27Q6MZM9 219 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 SIGLECL1Q8N7X8 197 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 OR10X1Q8NGY0 326 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 EMC7Q9NPA0 242 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 DFFBO76075 338 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 PMS2P2O95744 297 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 CR2P20023 1033 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 ZNF133P52736 654 aaPredicted RBP13.07□□□□□ -0.32
TRAF1-201ENST00000373887 DUSP2Q05923 314 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 SPANXN5Q5MJ07 72 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 NXNL2Q5VZ03 156 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 GDF7Q7Z4P5 450 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 SLC16A11Q8NCK7 471 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 OR5M8Q8NGP6 311 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 ZNF251Q9BRH9 671 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 SPACA1Q9HBV2 294 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 NPAP1Q9NZP6 1156 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 CLEC2DQ9UHP7 191 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 MMACHCQ9Y4U1 282 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 FITM1A5D6W6 292 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 GABRG2P18507 467 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 MFSD12Q6NUT3 480 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 KCTD12Q96CX2 325 aaKnown RBP13.07□□□□□ -0.32
TRAF1-201ENST00000373887 BOD1Q96IK1 185 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 PRRC2BQ5JSZ5 2229 aaKnown RBP13.07□□□□□ -0.32
TRAF1-201ENST00000373887 C7orf72A4D263 438 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 BTBD17A6NE02 478 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 TNFRSF10CO14798 259 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 RAD52P43351 418 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 HCCSP53701 268 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 SUB1P53999 127 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRAF1-201ENST00000373887 NHSL2Q5HYW2 709 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 GTF2H5Q6ZYL4 71 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 NIPSNAP1Q9BPW8 284 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 COA3Q9Y2R0 106 aaPredicted RBP13.07□□□□□ -0.32
TRAF1-201ENST00000373887 A0A1B0GWA3 101 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 ARPC3O15145 178 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 IAPPP10997 89 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 OR8G1Q15617 311 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 ASTLQ6HA08 431 aaPredicted RBP13.07□□□□□ -0.32
TRAF1-201ENST00000373887 LRRTM1Q86UE6 522 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 EMC6Q9BV81 110 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 UMAD1C9J7I0 102 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 SIRPB1O00241 398 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 PRRG2O14669 202 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 OR10A3P58181 314 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 GGTA1PQ4G0N0 100 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 AGBL4Q5VU57 503 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 TMEM207Q6UWW9 146 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 SCARB1Q8WTV0 552 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 EPHX3Q9H6B9 360 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 TAS2R4Q9NYW5 299 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 ETV7Q9Y603 341 aa13.07□□□□□ -0.32
TRAF1-201ENST00000373887 HEXAP06865 529 aa13.06□□□□□ -0.32
TRAF1-201ENST00000373887 HTR1FP30939 366 aa13.06□□□□□ -0.32
TRAF1-201ENST00000373887 NKX2-1P43699 371 aaPredicted RBP13.06□□□□□ -0.32
TRAF1-201ENST00000373887 MAP2K6P52564 334 aa13.06□□□□□ -0.32
TRAF1-201ENST00000373887 RPUSD4Q96CM3 377 aaKnown RBP13.06□□□□□ -0.32
TRAF1-201ENST00000373887 TMEM43Q9BTV4 400 aa13.06□□□□□ -0.32
TRAF1-201ENST00000373887 EVA1AQ9H8M9 152 aa13.06□□□□□ -0.32
TRAF1-201ENST00000373887 MED17Q9NVC6 651 aa13.06□□□□□ -0.32
TRAF1-201ENST00000373887 LSMEM2Q8N112 164 aa13.06□□□□□ -0.32
TRAF1-201ENST00000373887 SRRQ9GZT4 340 aa13.06□□□□□ -0.32
TRAF1-201ENST00000373887 KIAA1456Q9P272 454 aa13.06□□□□□ -0.32
TRAF1-201ENST00000373887 A0A087WV62 115 aa13.06□□□□□ -0.32
TRAF1-201ENST00000373887 TRABD2BA6NFA1 517 aa13.06□□□□□ -0.32
TRAF1-201ENST00000373887 PNPP00491 289 aa13.06□□□□□ -0.32
TRAF1-201ENST00000373887 WFDC8Q8IUA0 241 aa13.06□□□□□ -0.32
TRAF1-201ENST00000373887 PTDSS2Q9BVG9 487 aa13.06□□□□□ -0.32
TRAF1-201ENST00000373887 C12orf10Q9HB07 376 aa13.06□□□□□ -0.32
TRAF1-201ENST00000373887 SNCGO76070 127 aa13.06□□□□□ -0.32
TRAF1-201ENST00000373887 DUSP1P28562 367 aa13.06□□□□□ -0.32
TRAF1-201ENST00000373887 DPY19L2P2Q6ZN68 376 aa13.06□□□□□ -0.32
TRAF1-201ENST00000373887 ZNF596Q8TC21 504 aa13.06□□□□□ -0.32
TRAF1-201ENST00000373887 MENTQ9BUN1 341 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms