RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 HOXC4P09017 264 aaPredicted RBP15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 QDPRP09417 244 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 ALOX5APP20292 161 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 RBMXP38159 391 aaKnown RBP15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 ZNF84P51523 738 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 GSG1Q2KHT4 349 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 KLHDC3Q9BQ90 382 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 PISDQ9UG56 409 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 C14orf166Q9Y224 244 aaKnown RBP15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 MRPS28Q9Y2Q9 187 aaKnown RBP15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 NSG1A0A0A6YYJ2 146 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 IGHV3-64DA0A0J9YX35 117 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 A6NCN8 305 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 SERPINA5P05154 406 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 SKP2Q13309 424 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 OR52N5Q8NH56 324 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 RHBDD1Q8TEB9 315 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 HAVCR1Q96D42 359 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 SORCS2Q96PQ0 1159 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 OR8B4Q96RC9 309 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 FOXJ3Q9UPW0 622 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 A0A0A6YYH2 397 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 A6NJ64 397 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 MASP2O00187 686 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 ERCC1P07992 297 aaPredicted RBP15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 CCL7P80098 99 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 C9orf40Q8IXQ3 194 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 GABRG1Q8N1C3 465 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 PLEKHJ1Q9NW61 149 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 HIF3AQ9Y2N7 669 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 FAM221AA4D161 298 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 PDGFAP04085 211 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 FCGR2AP12318 317 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 FUT7Q11130 342 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 CD200R1LQ6Q8B3 271 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 GPR137CQ8N3F9 429 aa15.91■□□□□ 0.14
TRAF3IP1-201ENST00000373327 LILRA5A6NI73 299 aa15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 PIN1P1O15428 100 aa15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 NUDT1P36639 197 aa15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 MFGE8Q08431 387 aaPredicted RBP15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 SFRP5Q5T4F7 317 aa15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 HACD4Q5VWC8 232 aa15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 OR4K15Q8NH41 348 aa15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 ZNF442Q9H7R0 627 aa15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 MT-ATP6P00846 226 aa15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 CD53P19397 219 aa15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 RSU1Q15404 277 aa15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 TMEM185AQ8NFB2 350 aa15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 OR4D10Q8NGI6 311 aa15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 PHB2Q99623 299 aa15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 TMEM59Q9BXS4 323 aa15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 GPR84Q9NQS5 396 aa15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 EHFQ9NZC4 300 aa15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 LSM5Q9Y4Y9 91 aaKnown RBP15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 OGG1O15527 345 aa15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 BLVRBP30043 206 aaPredicted RBP15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 GABREP78334 506 aa15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 GK2Q14410 553 aaPredicted RBP15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 Q5BKY6 102 aa15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 ADGRE4PQ86SQ3 457 aa15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 IQCF2Q8IXL9 164 aa15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 GVQW1Q8N7I0 195 aa15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 C11orf40Q8WZ69 217 aa15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 CHST11Q9NPF2 352 aa15.9■□□□□ 0.14
TRAF3IP1-201ENST00000373327 RER1O15258 196 aa15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 KLF4O43474 513 aa15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 POU2F2P09086 479 aa15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 TRIM61Q5EBN2 209 aa15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 GSG1LQ6UXU4 331 aa15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 FJX1Q86VR8 437 aa15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 OR6M1Q8NGM8 313 aa15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 RAB3CQ96E17 227 aa15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 S1PR5Q9H228 398 aa15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 WRBO00258 174 aa15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 ZNHIT1O43257 154 aa15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 RBMXL2O75526 392 aaKnown RBP15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 FARS2O95363 451 aaKnown RBP15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 PNLIPRP2P54317 469 aa15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 OR1J4Q8NGS1 313 aa15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 WDR89Q96FK6 387 aaPredicted RBP15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 A0A0B4J2A0 478 aa15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 ZNF16P17020 682 aaPredicted RBP15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 FASLGP48023 281 aa15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 LUMP51884 338 aaPredicted RBP15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 CLDN6P56747 220 aa15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 ESCO2Q56NI9 601 aa15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 CTHRC1Q96CG8 243 aa15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 MRI1Q9BV20 369 aa15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 SHPKQ9UHJ6 478 aa15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 PCDHGA1Q9Y5H4 931 aa15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 FANCMQ8IYD8 2048 aa15.89■□□□□ 0.13
TRAF3IP1-201ENST00000373327 GUSBP08236 651 aa15.88■□□□□ 0.13
TRAF3IP1-201ENST00000373327 DBHP09172 617 aa15.88■□□□□ 0.13
TRAF3IP1-201ENST00000373327 PAQR8Q8TEZ7 354 aa15.88■□□□□ 0.13
TRAF3IP1-201ENST00000373327 PARP12Q9H0J9 701 aaKnown RBP15.88■□□□□ 0.13
TRAF3IP1-201ENST00000373327 ETV7Q9Y603 341 aa15.88■□□□□ 0.13
TRAF3IP1-201ENST00000373327 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.88■□□□□ 0.13
TRAF3IP1-201ENST00000373327 TNFSF12O43508 249 aa15.88■□□□□ 0.13
TRAF3IP1-201ENST00000373327 LTBRP36941 435 aa15.88■□□□□ 0.13
TRAF3IP1-201ENST00000373327 MYBPHQ13203 477 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms